RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 TMEM170BQ5T4T1 132 aa4.42□□□□□ -1.7
CASP4-201ENST00000393150 Q8IZM0 81 aa4.42□□□□□ -1.7
CASP4-201ENST00000393150 A0A0B4J2C4 111 aa4.41□□□□□ -1.7
CASP4-201ENST00000393150 LOC107984156A0A0G2JMH3 177 aa4.41□□□□□ -1.7
CASP4-201ENST00000393150 IGIPA6NJ69 53 aa4.41□□□□□ -1.7
CASP4-201ENST00000393150 J3QQQ9 107 aa4.41□□□□□ -1.7
CASP4-201ENST00000393150 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
CASP4-201ENST00000393150 COX6B2Q6YFQ2 88 aa4.41□□□□□ -1.7
CASP4-201ENST00000393150 TEN1Q86WV5 123 aa4.41□□□□□ -1.7
CASP4-201ENST00000393150 ARL17AQ8IVW1 177 aa4.41□□□□□ -1.7
CASP4-201ENST00000393150 PPDPFLQ8WWR9 84 aa4.41□□□□□ -1.7
CASP4-201ENST00000393150 COPS9Q8WXC6 57 aa4.41□□□□□ -1.7
CASP4-201ENST00000393150 IGKV2-28A0A075B6P5 120 aa4.4□□□□□ -1.71
CASP4-201ENST00000393150 IGKV2D-28P01615 120 aa4.4□□□□□ -1.71
CASP4-201ENST00000393150 ETDBQ3ZM63 59 aa4.4□□□□□ -1.71
CASP4-201ENST00000393150 C3orf22Q8N5N4 141 aa4.4□□□□□ -1.71
CASP4-201ENST00000393150 PRO1854Q9UHT4 67 aa4.4□□□□□ -1.71
CASP4-201ENST00000393150 PRO0461Q9UI25 63 aa4.4□□□□□ -1.71
CASP4-201ENST00000393150 SLC25A20O43772 301 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 MT3P25713 68 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 PSMB2P49721 201 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 MT1HP80294 61 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 PRLHP81277 87 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 Q1RN00 199 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 KRTAP13-1Q8IUC0 172 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 Q8NBF4 154 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 HIGD2AQ9BW72 106 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 KRTAP4-1Q9BYQ7 146 aa4.39□□□□□ -1.71
CASP4-201ENST00000393150 GEMIN7Q9H840 131 aaKnown RBP4.39□□□□□ -1.71
CASP4-201ENST00000393150 IGLV8-61A0A075B6I0 122 aa4.38□□□□□ -1.71
CASP4-201ENST00000393150 TMEM223A0PJW6 202 aa4.38□□□□□ -1.71
CASP4-201ENST00000393150 SCGB1C2P0DMR2 95 aa4.38□□□□□ -1.71
CASP4-201ENST00000393150 KRTAP10-6P60371 365 aaPredicted RBP4.38□□□□□ -1.71
CASP4-201ENST00000393150 ATXN8Q156A1 80 aa4.38□□□□□ -1.71
CASP4-201ENST00000393150 COX6CP09669 75 aa4.37□□□□□ -1.71
CASP4-201ENST00000393150 ZNF22P17026 224 aaPredicted RBP4.37□□□□□ -1.71
CASP4-201ENST00000393150 HERVK_113P63121 156 aa4.37□□□□□ -1.71
CASP4-201ENST00000393150 SPANXDQ9BXN6 97 aa4.37□□□□□ -1.71
CASP4-201ENST00000393150 SPANXCQ9NY87 97 aa4.37□□□□□ -1.71
CASP4-201ENST00000393150 ERG28Q9UKR5 140 aa4.37□□□□□ -1.71
CASP4-201ENST00000393150 IGLV4-3A0A075B6K6 122 aa4.36□□□□□ -1.71
CASP4-201ENST00000393150 TINCRA0A1B0GVN0 87 aa4.36□□□□□ -1.71
CASP4-201ENST00000393150 TIMM17BO60830 172 aa4.36□□□□□ -1.71
CASP4-201ENST00000393150 IFITM1P13164 125 aa4.36□□□□□ -1.71
CASP4-201ENST00000393150 TMEM126AQ9H061 195 aa4.36□□□□□ -1.71
CASP4-201ENST00000393150 A0A0J9YXY3 114 aa4.35□□□□□ -1.71
CASP4-201ENST00000393150 H3BT86 120 aa4.35□□□□□ -1.71
CASP4-201ENST00000393150 TCL1BO95988 128 aa4.35□□□□□ -1.71
CASP4-201ENST00000393150 TSPEAR-AS2P59090 65 aa4.35□□□□□ -1.71
CASP4-201ENST00000393150 RPS29P62273 56 aaKnown RBP4.35□□□□□ -1.71
CASP4-201ENST00000393150 ANKRD29Q8N6D5 301 aa4.35□□□□□ -1.71
CASP4-201ENST00000393150 AMELXQ99217 191 aa4.35□□□□□ -1.71
CASP4-201ENST00000393150 SNCGO76070 127 aa4.34□□□□□ -1.71
CASP4-201ENST00000393150 PCOTHQ58A44 107 aa4.34□□□□□ -1.71
CASP4-201ENST00000393150 SPRR4Q96PI1 79 aa4.34□□□□□ -1.71
CASP4-201ENST00000393150 FAM240AA0A1B0GVK7 77 aa4.33□□□□□ -1.72
CASP4-201ENST00000393150 C9JAW5 83 aa4.33□□□□□ -1.72
CASP4-201ENST00000393150 SPINK8P0C7L1 97 aa4.33□□□□□ -1.72
CASP4-201ENST00000393150 COX7B2Q8TF08 81 aa4.33□□□□□ -1.72
CASP4-201ENST00000393150 TRBV10-2A0A0K0K1G8 114 aa4.32□□□□□ -1.72
CASP4-201ENST00000393150 SSBP3-AS1Q7Z2R9 100 aa4.32□□□□□ -1.72
CASP4-201ENST00000393150 FAM104AQ969W3 186 aa4.32□□□□□ -1.72
CASP4-201ENST00000393150 SFTA2Q6UW10 78 aa4.31□□□□□ -1.72
CASP4-201ENST00000393150 MUSTN1Q8IVN3 82 aa4.31□□□□□ -1.72
CASP4-201ENST00000393150 Q8N377 158 aa4.31□□□□□ -1.72
CASP4-201ENST00000393150 CDKN2A-AS1Q9UH64 79 aa4.31□□□□□ -1.72
CASP4-201ENST00000393150 H7C2G1 150 aa4.3□□□□□ -1.72
CASP4-201ENST00000393150 M0R378 163 aa4.3□□□□□ -1.72
CASP4-201ENST00000393150 HERV-K104P63124 156 aa4.3□□□□□ -1.72
CASP4-201ENST00000393150 Q6Q795 121 aa4.3□□□□□ -1.72
CASP4-201ENST00000393150 ANAPC13Q9BS18 74 aa4.3□□□□□ -1.72
CASP4-201ENST00000393150 LINC00846Q9NV44 126 aa4.3□□□□□ -1.72
CASP4-201ENST00000393150 LST1O00453 97 aa4.29□□□□□ -1.72
CASP4-201ENST00000393150 ACYP1P07311 99 aa4.29□□□□□ -1.72
CASP4-201ENST00000393150 PFN2P35080 140 aa4.29□□□□□ -1.72
CASP4-201ENST00000393150 MOBPQ13875 183 aa4.29□□□□□ -1.72
CASP4-201ENST00000393150 FAM19A3Q7Z5A8 133 aa4.29□□□□□ -1.72
CASP4-201ENST00000393150 ETDCA0A1B0GVM5 59 aa4.28□□□□□ -1.72
CASP4-201ENST00000393150 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
CASP4-201ENST00000393150 COX17Q14061 63 aa4.28□□□□□ -1.72
CASP4-201ENST00000393150 Q6ZVQ6 151 aa4.28□□□□□ -1.72
CASP4-201ENST00000393150 LIMD2Q9BT23 127 aa4.28□□□□□ -1.72
CASP4-201ENST00000393150 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
CASP4-201ENST00000393150 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
CASP4-201ENST00000393150 SMCR5Q8TEV8 140 aa4.27□□□□□ -1.73
CASP4-201ENST00000393150 TRACP01848 142 aa4.26□□□□□ -1.73
CASP4-201ENST00000393150 KRTAP19-2Q3LHN2 52 aa4.26□□□□□ -1.73
CASP4-201ENST00000393150 C9orf153Q5TBE3 101 aa4.26□□□□□ -1.73
CASP4-201ENST00000393150 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
CASP4-201ENST00000393150 SND1-IT1Q9HBX3 110 aa4.26□□□□□ -1.73
CASP4-201ENST00000393150 TRAV13-2A0A0B4J235 113 aa4.25□□□□□ -1.73
CASP4-201ENST00000393150 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
CASP4-201ENST00000393150 KRTAP16-1A8MUX0 517 aa4.25□□□□□ -1.73
CASP4-201ENST00000393150 NDUFV3P56181 108 aaKnown RBP4.24□□□□□ -1.73
CASP4-201ENST00000393150 LINC00483Q53H64 154 aa4.24□□□□□ -1.73
CASP4-201ENST00000393150 LINC00308Q8TCZ7 52 aa4.24□□□□□ -1.73
CASP4-201ENST00000393150 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
CASP4-201ENST00000393150 TRBV7-7A0A0K0K1E9 115 aa4.23□□□□□ -1.73
CASP4-201ENST00000393150 TEX49A0A1B0GTD5 131 aa4.23□□□□□ -1.73
CASP4-201ENST00000393150 DNAL4O96015 105 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms