RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 IGLV5-52A0A0A0MRZ9 124 aa12.44□□□□□ -0.42
PTPN11-202ENST00000392597 HAMPP81172 84 aa12.44□□□□□ -0.42
PTPN11-202ENST00000392597 FRAS1Q86XX4 4008 aa12.43□□□□□ -0.42
PTPN11-202ENST00000392597 RYR3Q15413 4870 aa12.43□□□□□ -0.42
PTPN11-202ENST00000392597 IGLV8-61A0A075B6I0 122 aa12.42□□□□□ -0.42
PTPN11-202ENST00000392597 A0A087WVE0 104 aa12.42□□□□□ -0.42
PTPN11-202ENST00000392597 ATOX1O00244 68 aa12.42□□□□□ -0.42
PTPN11-202ENST00000392597 SPRR1BP22528 89 aa12.42□□□□□ -0.42
PTPN11-202ENST00000392597 KRTAP13-1Q8IUC0 172 aa12.42□□□□□ -0.42
PTPN11-202ENST00000392597 Q8NBF4 154 aa12.42□□□□□ -0.42
PTPN11-202ENST00000392597 A0A1W2PNM2 257 aa12.42□□□□□ -0.42
PTPN11-202ENST00000392597 PLAC8Q9NZF1 115 aa12.42□□□□□ -0.42
PTPN11-202ENST00000392597 SPRR4Q96PI1 79 aa12.4□□□□□ -0.42
PTPN11-202ENST00000392597 NREPQ16612 68 aa12.39□□□□□ -0.43
PTPN11-202ENST00000392597 FAT2Q9NYQ8 4349 aa12.35□□□□□ -0.43
PTPN11-202ENST00000392597 CRYGAP11844 174 aa12.34□□□□□ -0.43
PTPN11-202ENST00000392597 CCDC179H3BU77 68 aa12.33□□□□□ -0.44
PTPN11-202ENST00000392597 IGFL1Q6UW32 110 aa12.33□□□□□ -0.44
PTPN11-202ENST00000392597 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
PTPN11-202ENST00000392597 SCXQ7RTU7 201 aa12.29□□□□□ -0.44
PTPN11-202ENST00000392597 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
PTPN11-202ENST00000392597 BPY2O14599 106 aa12.29□□□□□ -0.44
PTPN11-202ENST00000392597 UQCRQO14949 82 aa12.29□□□□□ -0.44
PTPN11-202ENST00000392597 LINC00336Q6ZUF6 198 aa12.29□□□□□ -0.44
PTPN11-202ENST00000392597 COX7CP15954 63 aa12.27□□□□□ -0.44
PTPN11-202ENST00000392597 SERP2Q8N6R1 65 aa12.26□□□□□ -0.45
PTPN11-202ENST00000392597 KRTAP10-2P60368 255 aa12.25□□□□□ -0.45
PTPN11-202ENST00000392597 ZNF706Q9Y5V0 76 aaPredicted RBP12.25□□□□□ -0.45
PTPN11-202ENST00000392597 DNAH11Q96DT5 4516 aa12.24□□□□□ -0.45
PTPN11-202ENST00000392597 DNAH8Q96JB1 4490 aa12.23□□□□□ -0.45
PTPN11-202ENST00000392597 LINC00483Q53H64 154 aa12.23□□□□□ -0.45
PTPN11-202ENST00000392597 ZNF861PO60384 105 aa12.22□□□□□ -0.45
PTPN11-202ENST00000392597 IGKV4-1P06312 121 aa12.22□□□□□ -0.45
PTPN11-202ENST00000392597 A0A0G2JQZ4 141 aa12.21□□□□□ -0.46
PTPN11-202ENST00000392597 DNAH5Q8TE73 4624 aa12.2□□□□□ -0.46
PTPN11-202ENST00000392597 SMIM20Q8N5G0 67 aa12.19□□□□□ -0.46
PTPN11-202ENST00000392597 PKD1P98161 4303 aa12.19□□□□□ -0.46
PTPN11-202ENST00000392597 RPL37AP61513 92 aaKnown RBP12.17□□□□□ -0.46
PTPN11-202ENST00000392597 C9orf153Q5TBE3 101 aa12.17□□□□□ -0.46
PTPN11-202ENST00000392597 Q6ZSA8 131 aa12.17□□□□□ -0.46
PTPN11-202ENST00000392597 Q8N9L7 120 aa12.17□□□□□ -0.46
PTPN11-202ENST00000392597 A0A087WSZ3 146 aa12.16□□□□□ -0.46
PTPN11-202ENST00000392597 CIRBP-AS1Q8TBR5 109 aa12.15□□□□□ -0.46
PTPN11-202ENST00000392597 FAM30AQ9NZY2 134 aa12.15□□□□□ -0.46
PTPN11-202ENST00000392597 IGLV7-43P04211 117 aa12.14□□□□□ -0.47
PTPN11-202ENST00000392597 PKHD1P08F94 4074 aa12.13□□□□□ -0.47
PTPN11-202ENST00000392597 TRAV7A0A075B6U4 112 aa12.13□□□□□ -0.47
PTPN11-202ENST00000392597 A0A1B0GVY2 172 aa12.12□□□□□ -0.47
PTPN11-202ENST00000392597 DSCR10P59022 87 aa12.12□□□□□ -0.47
PTPN11-202ENST00000392597 KRTAP10-1P60331 282 aa12.1□□□□□ -0.47
PTPN11-202ENST00000392597 IGLV9-49A0A0B4J1Y8 123 aa12.09□□□□□ -0.47
PTPN11-202ENST00000392597 K7EQZ3 153 aa12.04□□□□□ -0.48
PTPN11-202ENST00000392597 LINC00472Q9H8W2 130 aa12.02□□□□□ -0.48
PTPN11-202ENST00000392597 MOBPQ13875 183 aa12.01□□□□□ -0.49
PTPN11-202ENST00000392597 LRP1BQ9NZR2 4599 aa12□□□□□ -0.49
PTPN11-202ENST00000392597 DEFB116Q30KQ4 102 aa11.99□□□□□ -0.49
PTPN11-202ENST00000392597 EPPK1P58107 5090 aaKnown RBP11.99□□□□□ -0.49
PTPN11-202ENST00000392597 OCR1Q9BZK8 76 aa11.98□□□□□ -0.49
PTPN11-202ENST00000392597 ANAPC11Q9NYG5 84 aa11.98□□□□□ -0.49
PTPN11-202ENST00000392597 J3KT08 172 aa11.97□□□□□ -0.49
PTPN11-202ENST00000392597 SS18L2Q9UHA2 77 aa11.97□□□□□ -0.49
PTPN11-202ENST00000392597 DYNC1H1Q14204 4646 aaKnown RBP11.97□□□□□ -0.49
PTPN11-202ENST00000392597 C20orf197Q8N268 126 aa11.96□□□□□ -0.49
PTPN11-202ENST00000392597 HCG22E2RYF7 251 aa11.95□□□□□ -0.5
PTPN11-202ENST00000392597 CYSTM1Q9H1C7 97 aa11.95□□□□□ -0.5
PTPN11-202ENST00000392597 A8MWP4 228 aa11.94□□□□□ -0.5
PTPN11-202ENST00000392597 PRR15Q8IV56 129 aa11.93□□□□□ -0.5
PTPN11-202ENST00000392597 KLKP1Q107X0 134 aa11.92□□□□□ -0.5
PTPN11-202ENST00000392597 SSBP3-AS1Q7Z2R9 100 aa11.89□□□□□ -0.51
PTPN11-202ENST00000392597 Q96NJ1 140 aa11.89□□□□□ -0.51
PTPN11-202ENST00000392597 TMEM258P61165 79 aa11.89□□□□□ -0.51
PTPN11-202ENST00000392597 HRCT1Q6UXD1 115 aa11.89□□□□□ -0.51
PTPN11-202ENST00000392597 CD164Q04900 197 aa11.88□□□□□ -0.51
PTPN11-202ENST00000392597 FAM229BQ4G0N7 80 aa11.86□□□□□ -0.51
PTPN11-202ENST00000392597 NDUFB1O75438 58 aa11.85□□□□□ -0.51
PTPN11-202ENST00000392597 TMEM254Q8TBM7 123 aa11.85□□□□□ -0.51
PTPN11-202ENST00000392597 KRTAP29-1A8MX34 341 aaPredicted RBP11.84□□□□□ -0.51
PTPN11-202ENST00000392597 APOBP04114 4563 aaKnown RBP11.83□□□□□ -0.51
PTPN11-202ENST00000392597 NDUFC1O43677 76 aa11.81□□□□□ -0.52
PTPN11-202ENST00000392597 WFDC13Q8IUB5 93 aa11.81□□□□□ -0.52
PTPN11-202ENST00000392597 SNURFQ9Y675 71 aa11.81□□□□□ -0.52
PTPN11-202ENST00000392597 VPS13BQ7Z7G8 4022 aa11.81□□□□□ -0.52
PTPN11-202ENST00000392597 CASC2Q6XLA1 102 aa11.8□□□□□ -0.52
PTPN11-202ENST00000392597 H7BZZ5 65 aa11.8□□□□□ -0.52
PTPN11-202ENST00000392597 A0A0U1RQV1 116 aa11.78□□□□□ -0.52
PTPN11-202ENST00000392597 A0A087X002 238 aa11.76□□□□□ -0.53
PTPN11-202ENST00000392597 MMP24-AS1A0A0U1RRL7 71 aa11.76□□□□□ -0.53
PTPN11-202ENST00000392597 KRTAP1-4P0C5Y4 121 aa11.76□□□□□ -0.53
PTPN11-202ENST00000392597 KRTAP13-2Q52LG2 175 aa11.76□□□□□ -0.53
PTPN11-202ENST00000392597 ASB16-AS1Q495Z4 193 aa11.75□□□□□ -0.53
PTPN11-202ENST00000392597 C5orf47Q569G3 176 aa11.75□□□□□ -0.53
PTPN11-202ENST00000392597 CDK2AP2O75956 126 aa11.74□□□□□ -0.53
PTPN11-202ENST00000392597 A0A1B0GVX0 72 aa11.73□□□□□ -0.53
PTPN11-202ENST00000392597 BIRC6Q9NR09 4857 aa11.71□□□□□ -0.53
PTPN11-202ENST00000392597 hDV103S1A0JD37 113 aa11.71□□□□□ -0.53
PTPN11-202ENST00000392597 KIAA1109Q2LD37 5005 aa11.7□□□□□ -0.54
PTPN11-202ENST00000392597 HSPG2P98160 4391 aa11.7□□□□□ -0.54
PTPN11-202ENST00000392597 RYR1P21817 5038 aa11.7□□□□□ -0.54
PTPN11-202ENST00000392597 Q5XG85 94 aa11.7□□□□□ -0.54
PTPN11-202ENST00000392597 SPINK6Q6UWN8 80 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 789.8 ms