RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 SSBP3-AS1Q7Z2R9 100 aa8.72□□□□□ -1.01
SUMO1-203ENST00000392246 CLEC2BQ92478 149 aa8.72□□□□□ -1.01
SUMO1-203ENST00000392246 OCIAD2Q56VL3 154 aa8.71□□□□□ -1.01
SUMO1-203ENST00000392246 C9orf153Q5TBE3 101 aa8.71□□□□□ -1.01
SUMO1-203ENST00000392246 SMIM29Q86T20 159 aa8.7□□□□□ -1.02
SUMO1-203ENST00000392246 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
SUMO1-203ENST00000392246 PPDPFLQ8WWR9 84 aa8.7□□□□□ -1.02
SUMO1-203ENST00000392246 Q8NBF4 154 aa8.7□□□□□ -1.02
SUMO1-203ENST00000392246 GHRHP01286 108 aa8.69□□□□□ -1.02
SUMO1-203ENST00000392246 DNAL4O96015 105 aa8.68□□□□□ -1.02
SUMO1-203ENST00000392246 HERC1Q15751 4861 aa8.67□□□□□ -1.02
SUMO1-203ENST00000392246 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
SUMO1-203ENST00000392246 SPAG11AQ6PDA7 123 aa8.67□□□□□ -1.02
SUMO1-203ENST00000392246 NAA38Q9BRA0 125 aaKnown RBP8.67□□□□□ -1.02
SUMO1-203ENST00000392246 SNHG12Q9BXW3 62 aa8.67□□□□□ -1.02
SUMO1-203ENST00000392246 PCP4L1A6NKN8 68 aa8.66□□□□□ -1.02
SUMO1-203ENST00000392246 F8WEM9 126 aa8.64□□□□□ -1.03
SUMO1-203ENST00000392246 LST1O00453 97 aa8.64□□□□□ -1.03
SUMO1-203ENST00000392246 TRACP01848 142 aa8.64□□□□□ -1.03
SUMO1-203ENST00000392246 H3BUT2 72 aa8.64□□□□□ -1.03
SUMO1-203ENST00000392246 TAX1BP3O14907 124 aa8.64□□□□□ -1.03
SUMO1-203ENST00000392246 LYRM7Q5U5X0 104 aa8.64□□□□□ -1.03
SUMO1-203ENST00000392246 ORMDL1Q9P0S3 153 aa8.64□□□□□ -1.03
SUMO1-203ENST00000392246 C9orf118A6NHY6 69 aa8.63□□□□□ -1.03
SUMO1-203ENST00000392246 H3BQ85 93 aa8.63□□□□□ -1.03
SUMO1-203ENST00000392246 SPINK1P00995 79 aa8.61□□□□□ -1.03
SUMO1-203ENST00000392246 FABP2P12104 132 aa8.61□□□□□ -1.03
SUMO1-203ENST00000392246 ATXN8Q156A1 80 aa8.61□□□□□ -1.03
SUMO1-203ENST00000392246 TCL1BO95988 128 aa8.6□□□□□ -1.03
SUMO1-203ENST00000392246 COL5A1-AS1Q5SY13 56 aa8.6□□□□□ -1.03
SUMO1-203ENST00000392246 IGLV8-61A0A075B6I0 122 aa8.59□□□□□ -1.03
SUMO1-203ENST00000392246 TMEM256-PLSCR3K7ERE1 68 aa8.59□□□□□ -1.03
SUMO1-203ENST00000392246 NDUFV3P56181 108 aaKnown RBP8.59□□□□□ -1.03
SUMO1-203ENST00000392246 TRBV20-1A0A075B6N2 111 aa8.59□□□□□ -1.03
SUMO1-203ENST00000392246 Q6JHZ5 121 aa8.58□□□□□ -1.04
SUMO1-203ENST00000392246 A0A1W2PPM0 123 aa8.57□□□□□ -1.04
SUMO1-203ENST00000392246 RPS29P62273 56 aaKnown RBP8.57□□□□□ -1.04
SUMO1-203ENST00000392246 CD164Q04900 197 aa8.57□□□□□ -1.04
SUMO1-203ENST00000392246 HRCT1Q6UXD1 115 aa8.55□□□□□ -1.04
SUMO1-203ENST00000392246 A0A0G2JQZ4 141 aa8.54□□□□□ -1.04
SUMO1-203ENST00000392246 H3BMG7 143 aa8.54□□□□□ -1.04
SUMO1-203ENST00000392246 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
SUMO1-203ENST00000392246 BAALC-AS2P0C853 105 aa8.54□□□□□ -1.04
SUMO1-203ENST00000392246 IGFL1Q6UW32 110 aa8.54□□□□□ -1.04
SUMO1-203ENST00000392246 LIMD2Q9BT23 127 aa8.51□□□□□ -1.05
SUMO1-203ENST00000392246 PRR4Q16378 134 aa8.49□□□□□ -1.05
SUMO1-203ENST00000392246 ANKRD29Q8N6D5 301 aa8.49□□□□□ -1.05
SUMO1-203ENST00000392246 RETNLBQ9BQ08 111 aa8.49□□□□□ -1.05
SUMO1-203ENST00000392246 C9JAW5 83 aa8.49□□□□□ -1.05
SUMO1-203ENST00000392246 SPCS1Q9Y6A9 102 aa8.49□□□□□ -1.05
SUMO1-203ENST00000392246 A0A1B0GV72 72 aa8.47□□□□□ -1.05
SUMO1-203ENST00000392246 Q5XG85 94 aa8.47□□□□□ -1.05
SUMO1-203ENST00000392246 TRBV7-7A0A0K0K1E9 115 aa8.46□□□□□ -1.05
SUMO1-203ENST00000392246 HMCN2Q8NDA2 5059 aa8.46□□□□□ -1.06
SUMO1-203ENST00000392246 RBM3P98179 157 aaKnown RBP8.45□□□□□ -1.06
SUMO1-203ENST00000392246 Q6Q795 121 aa8.45□□□□□ -1.06
SUMO1-203ENST00000392246 TEN1Q86WV5 123 aa8.45□□□□□ -1.06
SUMO1-203ENST00000392246 FP248Q71RG6 208 aaPredicted RBP8.44□□□□□ -1.06
SUMO1-203ENST00000392246 JMJD7-PLA2G4BH0Y9G9 81 aa8.43□□□□□ -1.06
SUMO1-203ENST00000392246 H3BT86 120 aa8.43□□□□□ -1.06
SUMO1-203ENST00000392246 DSCR8Q96T75 97 aa8.43□□□□□ -1.06
SUMO1-203ENST00000392246 IGLV7-46A0A075B6I9 117 aa8.41□□□□□ -1.06
SUMO1-203ENST00000392246 TRBV7-4A0A0J9YYF1 115 aa8.41□□□□□ -1.06
SUMO1-203ENST00000392246 A0A1W2PNM2 257 aa8.41□□□□□ -1.06
SUMO1-203ENST00000392246 K7EP34 96 aa8.41□□□□□ -1.06
SUMO1-203ENST00000392246 MTURNQ8N3F0 131 aa8.4□□□□□ -1.06
SUMO1-203ENST00000392246 CCKP06307 115 aa8.39□□□□□ -1.07
SUMO1-203ENST00000392246 ASB16-AS1Q495Z4 193 aa8.39□□□□□ -1.07
SUMO1-203ENST00000392246 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
SUMO1-203ENST00000392246 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
SUMO1-203ENST00000392246 SS18L2Q9UHA2 77 aa8.38□□□□□ -1.07
SUMO1-203ENST00000392246 A0A087WSZ3 146 aa8.37□□□□□ -1.07
SUMO1-203ENST00000392246 C1orf195Q5TG92 126 aa8.37□□□□□ -1.07
SUMO1-203ENST00000392246 OBSCN-AS1Q96MR7 158 aa8.37□□□□□ -1.07
SUMO1-203ENST00000392246 LPAP08519 4548 aa8.34□□□□□ -1.07
SUMO1-203ENST00000392246 LOC110117498A0A087WWA1 95 aa8.34□□□□□ -1.07
SUMO1-203ENST00000392246 PDE6GP18545 87 aa8.34□□□□□ -1.07
SUMO1-203ENST00000392246 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
SUMO1-203ENST00000392246 VPS25Q9BRG1 176 aa8.34□□□□□ -1.07
SUMO1-203ENST00000392246 C14orf132Q9NPU4 83 aa8.34□□□□□ -1.08
SUMO1-203ENST00000392246 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
SUMO1-203ENST00000392246 Q6ZQT0 140 aa8.33□□□□□ -1.08
SUMO1-203ENST00000392246 PRO0461Q9UI25 63 aa8.33□□□□□ -1.08
SUMO1-203ENST00000392246 LRP2P98164 4655 aa8.32□□□□□ -1.08
SUMO1-203ENST00000392246 C21orf62-AS1Q17RA5 79 aa8.3□□□□□ -1.08
SUMO1-203ENST00000392246 KRTAP13-3Q3SY46 172 aa8.29□□□□□ -1.08
SUMO1-203ENST00000392246 F8W1H4 67 aa8.29□□□□□ -1.08
SUMO1-203ENST00000392246 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
SUMO1-203ENST00000392246 A0A1B0GW54 56 aa8.28□□□□□ -1.08
SUMO1-203ENST00000392246 Q96NJ1 140 aa8.25□□□□□ -1.09
SUMO1-203ENST00000392246 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
SUMO1-203ENST00000392246 C9orf92A6NGG3 77 aa8.2□□□□□ -1.1
SUMO1-203ENST00000392246 IGKV4-1P06312 121 aa8.2□□□□□ -1.1
SUMO1-203ENST00000392246 A0A1B0GV90 55 aa8.19□□□□□ -1.1
SUMO1-203ENST00000392246 DEFB116Q30KQ4 102 aa8.19□□□□□ -1.1
SUMO1-203ENST00000392246 ETDBQ3ZM63 59 aa8.19□□□□□ -1.1
SUMO1-203ENST00000392246 SIGMAR1Q99720 223 aa8.19□□□□□ -1.1
SUMO1-203ENST00000392246 XP32Q5T750 250 aa8.17□□□□□ -1.1
SUMO1-203ENST00000392246 NREPQ16612 68 aa8.16□□□□□ -1.1
SUMO1-203ENST00000392246 J3KT08 172 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms