RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 CFAP126Q5VTH2 177 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 MYMXA0A1B0GTQ4 84 aa3.52□□□□□ -1.85
ERCC4-202ENST00000389138 SFTA2Q6UW10 78 aa3.52□□□□□ -1.85
ERCC4-202ENST00000389138 Q6ZTI0 123 aa3.52□□□□□ -1.85
ERCC4-202ENST00000389138 TMEM141Q96I45 108 aa3.52□□□□□ -1.85
ERCC4-202ENST00000389138 DYNC1H1Q14204 4646 aaKnown RBP3.52□□□□□ -1.85
ERCC4-202ENST00000389138 PKHD1P08F94 4074 aa3.52□□□□□ -1.85
ERCC4-202ENST00000389138 TRBV6-5A0A0K0K1A5 114 aa3.52□□□□□ -1.85
ERCC4-202ENST00000389138 SPTSSBQ8NFR3 76 aa3.52□□□□□ -1.85
ERCC4-202ENST00000389138 A8MTW9 85 aa3.51□□□□□ -1.85
ERCC4-202ENST00000389138 SMIM13P0DJ93 91 aa3.51□□□□□ -1.85
ERCC4-202ENST00000389138 NOP10Q9NPE3 64 aaKnown RBP3.51□□□□□ -1.85
ERCC4-202ENST00000389138 TRAV2A0A0B4J234 112 aa3.5□□□□□ -1.85
ERCC4-202ENST00000389138 IGLV7-43P04211 117 aa3.5□□□□□ -1.85
ERCC4-202ENST00000389138 HIGD2BQ4VC39 106 aa3.5□□□□□ -1.85
ERCC4-202ENST00000389138 A0A0J9YWU9 116 aa3.5□□□□□ -1.85
ERCC4-202ENST00000389138 A0A1B0GU33 70 aa3.5□□□□□ -1.85
ERCC4-202ENST00000389138 VPS13DQ5THJ4 4388 aa3.5□□□□□ -1.85
ERCC4-202ENST00000389138 TRBV7-3A0A075B6L6 115 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 TRGV2A0A075B6R0 118 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 A0A087WYN8 130 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 A8MU10 97 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 C9orf116Q5BN46 136 aaPredicted RBP3.49□□□□□ -1.85
ERCC4-202ENST00000389138 CASC2Q6XLA1 102 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 UBR4Q5T4S7 5183 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 MIR22HGQ0VDD5 57 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 LINC00612Q8N6U2 182 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 C14orf132Q9NPU4 83 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
ERCC4-202ENST00000389138 FAT2Q9NYQ8 4349 aa3.48□□□□□ -1.85
ERCC4-202ENST00000389138 A0A0J9YY99 117 aa3.48□□□□□ -1.85
ERCC4-202ENST00000389138 HCG22E2RYF7 251 aa3.48□□□□□ -1.85
ERCC4-202ENST00000389138 DEFB130BP0DP73 79 aa3.48□□□□□ -1.85
ERCC4-202ENST00000389138 DEFB130AP0DP74 79 aa3.48□□□□□ -1.85
ERCC4-202ENST00000389138 ST20-AS1Q8NBB2 130 aa3.48□□□□□ -1.85
ERCC4-202ENST00000389138 TMEM263Q8WUH6 116 aaKnown RBP3.48□□□□□ -1.85
ERCC4-202ENST00000389138 UBE2D4Q9Y2X8 147 aa3.48□□□□□ -1.85
ERCC4-202ENST00000389138 IGKV3OR2-268A0A0C4DH90 116 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 H7BZZ5 65 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 DEFB4AO15263 64 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 AMELXQ99217 191 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 TIMM21Q9BVV7 248 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 KLK12Q9UKR0 248 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 HSPG2P98160 4391 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 DNAH11Q96DT5 4516 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 LINC01549A6NIU2 74 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 DNAH2Q9P225 4427 aa3.47□□□□□ -1.85
ERCC4-202ENST00000389138 TRGV4A0A0C4DH28 118 aa3.46□□□□□ -1.86
ERCC4-202ENST00000389138 COX6A2Q02221 97 aa3.46□□□□□ -1.86
ERCC4-202ENST00000389138 ZNF625Q96I27 306 aaPredicted RBP3.46□□□□□ -1.86
ERCC4-202ENST00000389138 CDKN2A-AS1Q9UH64 79 aa3.46□□□□□ -1.86
ERCC4-202ENST00000389138 A0A096LPF7 62 aa3.46□□□□□ -1.86
ERCC4-202ENST00000389138 TRAV13-2A0A0B4J235 113 aa3.46□□□□□ -1.86
ERCC4-202ENST00000389138 IGHV3-30P01768 117 aa3.46□□□□□ -1.86
ERCC4-202ENST00000389138 IGHV3-30-5P0DP03 117 aa3.46□□□□□ -1.86
ERCC4-202ENST00000389138 IGLV10-54A0A075B6I4 117 aa3.45□□□□□ -1.86
ERCC4-202ENST00000389138 A0A087WSZ3 146 aa3.45□□□□□ -1.86
ERCC4-202ENST00000389138 DEFB135Q30KP9 77 aa3.45□□□□□ -1.86
ERCC4-202ENST00000389138 C14orf177Q52M58 125 aa3.45□□□□□ -1.86
ERCC4-202ENST00000389138 KRTAP7-1Q8IUC3 87 aa3.45□□□□□ -1.86
ERCC4-202ENST00000389138 MUSTN1Q8IVN3 82 aa3.45□□□□□ -1.86
ERCC4-202ENST00000389138 DNAH17Q9UFH2 4485 aa3.45□□□□□ -1.86
ERCC4-202ENST00000389138 PKD1P98161 4303 aa3.45□□□□□ -1.86
ERCC4-202ENST00000389138 UBE2D1P51668 147 aa3.44□□□□□ -1.86
ERCC4-202ENST00000389138 UBE2D3P61077 147 aa3.44□□□□□ -1.86
ERCC4-202ENST00000389138 UBE2D2P62837 147 aa3.44□□□□□ -1.86
ERCC4-202ENST00000389138 C9orf163Q8N9P6 203 aa3.44□□□□□ -1.86
ERCC4-202ENST00000389138 KRTAP1-5Q9BYS1 174 aa3.44□□□□□ -1.86
ERCC4-202ENST00000389138 KRTAP29-1A8MX34 341 aaPredicted RBP3.44□□□□□ -1.86
ERCC4-202ENST00000389138 CLPSL2Q6UWE3 100 aa3.43□□□□□ -1.86
ERCC4-202ENST00000389138 IGLV4-60A0A075B6I1 120 aa3.43□□□□□ -1.86
ERCC4-202ENST00000389138 TRBV10-1A0A0K0K1A3 114 aa3.43□□□□□ -1.86
ERCC4-202ENST00000389138 LINC00483Q53H64 154 aa3.43□□□□□ -1.86
ERCC4-202ENST00000389138 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
ERCC4-202ENST00000389138 HTN3P15516 51 aa3.42□□□□□ -1.86
ERCC4-202ENST00000389138 MOBPQ13875 183 aa3.42□□□□□ -1.86
ERCC4-202ENST00000389138 KRTAP26-1Q6PEX3 210 aa3.42□□□□□ -1.86
ERCC4-202ENST00000389138 LINC01600Q96MT4 127 aa3.42□□□□□ -1.86
ERCC4-202ENST00000389138 CDC42SE2Q9NRR3 84 aa3.42□□□□□ -1.86
ERCC4-202ENST00000389138 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
ERCC4-202ENST00000389138 PRO1854Q9UHT4 67 aa3.42□□□□□ -1.86
ERCC4-202ENST00000389138 TRAV10A0A0B4J240 114 aa3.41□□□□□ -1.86
ERCC4-202ENST00000389138 LY6G6CO95867 125 aa3.41□□□□□ -1.86
ERCC4-202ENST00000389138 MIFP14174 115 aa3.41□□□□□ -1.86
ERCC4-202ENST00000389138 TRBV6-4A0A1B0GX49 114 aa3.41□□□□□ -1.86
ERCC4-202ENST00000389138 BAALC-AS2P0C853 105 aa3.41□□□□□ -1.86
ERCC4-202ENST00000389138 TRBV6-8A0A0A6YYG3 113 aa3.4□□□□□ -1.86
ERCC4-202ENST00000389138 TRBV10-3A0A0K0K1G6 114 aa3.4□□□□□ -1.86
ERCC4-202ENST00000389138 TEX49A0A1B0GTD5 131 aa3.4□□□□□ -1.86
ERCC4-202ENST00000389138 NDUFC1O43677 76 aa3.4□□□□□ -1.86
ERCC4-202ENST00000389138 IGHV3-33P01772 117 aa3.4□□□□□ -1.86
ERCC4-202ENST00000389138 TMEM254Q8TBM7 123 aa3.4□□□□□ -1.86
ERCC4-202ENST00000389138 NDUFA1O15239 70 aa3.4□□□□□ -1.87
ERCC4-202ENST00000389138 ERC2-IT1O76042 136 aa3.4□□□□□ -1.87
ERCC4-202ENST00000389138 CYP4F30PQ9H0H9 118 aa3.4□□□□□ -1.87
ERCC4-202ENST00000389138 TRAV22A0A0B4J277 110 aa3.39□□□□□ -1.87
ERCC4-202ENST00000389138 Q5VV11 94 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms