RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PSENENQ9NZ42 101 aa-0.51□□□□□ -2.49
RNU6-40P-201ENST00000384254 SPENQ96T58 3664 aaKnown RBP-0.51□□□□□ -2.49
RNU6-40P-201ENST00000384254 MED14O60244 1454 aa-0.52□□□□□ -2.49
RNU6-40P-201ENST00000384254 F8WEM9 126 aa-0.52□□□□□ -2.49
RNU6-40P-201ENST00000384254 MT1BP07438 61 aa-0.52□□□□□ -2.49
RNU6-40P-201ENST00000384254 MRPL34Q9BQ48 92 aaKnown RBP-0.52□□□□□ -2.49
RNU6-40P-201ENST00000384254 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.53□□□□□ -2.49
RNU6-40P-201ENST00000384254 GOLGB1Q14789 3259 aaKnown RBP-0.53□□□□□ -2.49
RNU6-40P-201ENST00000384254 KRTAP8-1Q8IUC2 63 aa-0.53□□□□□ -2.49
RNU6-40P-201ENST00000384254 SAMD9Q5K651 1589 aa-0.53□□□□□ -2.49
RNU6-40P-201ENST00000384254 CUX1P39880 1505 aa-0.54□□□□□ -2.5
RNU6-40P-201ENST00000384254 DNAH14Q0VDD8 3507 aa-0.54□□□□□ -2.5
RNU6-40P-201ENST00000384254 MT1HL1P0DM35 61 aa-0.54□□□□□ -2.5
RNU6-40P-201ENST00000384254 SMARCA2P51531 1590 aa-0.54□□□□□ -2.5
RNU6-40P-201ENST00000384254 DNAH9Q9NYC9 4486 aa-0.55□□□□□ -2.5
RNU6-40P-201ENST00000384254 MYH4Q9Y623 1939 aa-0.55□□□□□ -2.5
RNU6-40P-201ENST00000384254 S100A8P05109 93 aa-0.55□□□□□ -2.5
RNU6-40P-201ENST00000384254 KRTAP6-2Q3LI66 62 aa-0.55□□□□□ -2.5
RNU6-40P-201ENST00000384254 HEPN1Q6WQI6 88 aa-0.55□□□□□ -2.5
RNU6-40P-201ENST00000384254 ANK3Q12955 4377 aaKnown RBP-0.55□□□□□ -2.5
RNU6-40P-201ENST00000384254 DNAH11Q96DT5 4516 aa-0.56□□□□□ -2.5
RNU6-40P-201ENST00000384254 IGLC2P0DOY2 106 aa-0.56□□□□□ -2.5
RNU6-40P-201ENST00000384254 IGLC3P0DOY3 106 aa-0.56□□□□□ -2.5
RNU6-40P-201ENST00000384254 EPRSP07814 1512 aaKnown RBP-0.56□□□□□ -2.5
RNU6-40P-201ENST00000384254 DNAH8Q96JB1 4490 aa-0.56□□□□□ -2.5
RNU6-40P-201ENST00000384254 CRYBG1Q9Y4K1 1723 aa-0.56□□□□□ -2.5
RNU6-40P-201ENST00000384254 CLIP1P30622 1438 aa-0.56□□□□□ -2.5
RNU6-40P-201ENST00000384254 VPS13DQ5THJ4 4388 aa-0.57□□□□□ -2.5
RNU6-40P-201ENST00000384254 SMIM11AP58511 58 aa-0.57□□□□□ -2.5
RNU6-40P-201ENST00000384254 DEFB135Q30KP9 77 aa-0.57□□□□□ -2.5
RNU6-40P-201ENST00000384254 VPS8Q8N3P4 1428 aa-0.57□□□□□ -2.5
RNU6-40P-201ENST00000384254 XIRP2A4UGR9 3374 aa-0.58□□□□□ -2.5
RNU6-40P-201ENST00000384254 DEFB112Q30KQ8 113 aa-0.58□□□□□ -2.5
RNU6-40P-201ENST00000384254 TRRAPQ9Y4A5 3859 aa-0.58□□□□□ -2.5
RNU6-40P-201ENST00000384254 DNAH10Q8IVF4 4471 aa-0.58□□□□□ -2.5
RNU6-40P-201ENST00000384254 GYPAP02724 150 aa-0.59□□□□□ -2.5
RNU6-40P-201ENST00000384254 PKIAP61925 76 aa-0.59□□□□□ -2.5
RNU6-40P-201ENST00000384254 CDKN2A-AS1Q9UH64 79 aa-0.59□□□□□ -2.5
RNU6-40P-201ENST00000384254 SMG1Q96Q15 3661 aaKnown RBP-0.59□□□□□ -2.5
RNU6-40P-201ENST00000384254 ASXL1Q8IXJ9 1541 aa-0.59□□□□□ -2.5
RNU6-40P-201ENST00000384254 FANCAO15360 1455 aa-0.6□□□□□ -2.5
RNU6-40P-201ENST00000384254 DNAH17Q9UFH2 4485 aa-0.6□□□□□ -2.51
RNU6-40P-201ENST00000384254 ABCC10Q5T3U5 1492 aa-0.61□□□□□ -2.51
RNU6-40P-201ENST00000384254 PKD1L3Q7Z443 1732 aa-0.61□□□□□ -2.51
RNU6-40P-201ENST00000384254 KNL1Q8NG31 2342 aa-0.61□□□□□ -2.51
RNU6-40P-201ENST00000384254 C9orf62Q8N4C0 152 aa-0.61□□□□□ -2.51
RNU6-40P-201ENST00000384254 DNAH2Q9P225 4427 aa-0.61□□□□□ -2.51
RNU6-40P-201ENST00000384254 AKAP12Q02952 1782 aa-0.62□□□□□ -2.51
RNU6-40P-201ENST00000384254 UBR3Q6ZT12 1888 aa-0.62□□□□□ -2.51
RNU6-40P-201ENST00000384254 LCE6AA0A183 80 aa-0.62□□□□□ -2.51
RNU6-40P-201ENST00000384254 ANKRD26Q9UPS8 1709 aa-0.62□□□□□ -2.51
RNU6-40P-201ENST00000384254 ATP10BO94823 1461 aa-0.62□□□□□ -2.51
RNU6-40P-201ENST00000384254 BCORQ6W2J9 1755 aa-0.62□□□□□ -2.51
RNU6-40P-201ENST00000384254 DEFA5Q01523 94 aa-0.63□□□□□ -2.51
RNU6-40P-201ENST00000384254 PEA15Q15121 130 aa-0.63□□□□□ -2.51
RNU6-40P-201ENST00000384254 HIGD1BQ9P298 99 aa-0.63□□□□□ -2.51
RNU6-40P-201ENST00000384254 UBE2D4Q9Y2X8 147 aa-0.63□□□□□ -2.51
RNU6-40P-201ENST00000384254 SNHG12Q9BXW3 62 aa-0.64□□□□□ -2.51
RNU6-40P-201ENST00000384254 AKAP9Q99996 3911 aa-0.64□□□□□ -2.51
RNU6-40P-201ENST00000384254 DMDP11532 3685 aa-0.65□□□□□ -2.51
RNU6-40P-201ENST00000384254 MT1FP04733 61 aa-0.65□□□□□ -2.51
RNU6-40P-201ENST00000384254 SPTBN5Q9NRC6 3674 aaKnown RBP-0.66□□□□□ -2.51
RNU6-40P-201ENST00000384254 HMGN2P05204 90 aaKnown RBP-0.66□□□□□ -2.52
RNU6-40P-201ENST00000384254 MT1HP80294 61 aa-0.66□□□□□ -2.52
RNU6-40P-201ENST00000384254 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-40P-201ENST00000384254 MAGI2Q86UL8 1455 aa-0.67□□□□□ -2.52
RNU6-40P-201ENST00000384254 RGPD2P0DJD1 1756 aa-0.67□□□□□ -2.52
RNU6-40P-201ENST00000384254 NMSQ5H8A3 153 aa-0.67□□□□□ -2.52
RNU6-40P-201ENST00000384254 RPL38P63173 70 aaKnown RBP-0.68□□□□□ -2.52
RNU6-40P-201ENST00000384254 PLGLAQ15195 96 aa-0.68□□□□□ -2.52
RNU6-40P-201ENST00000384254 MT1MQ8N339 61 aa-0.68□□□□□ -2.52
RNU6-40P-201ENST00000384254 A0A1B0GUT8 65 aa-0.69□□□□□ -2.52
RNU6-40P-201ENST00000384254 MT2AP02795 61 aa-0.69□□□□□ -2.52
RNU6-40P-201ENST00000384254 MT1GP13640 62 aa-0.69□□□□□ -2.52
RNU6-40P-201ENST00000384254 WFDC13Q8IUB5 93 aa-0.7□□□□□ -2.52
RNU6-40P-201ENST00000384254 QSER1Q2KHR3 1735 aa-0.7□□□□□ -2.52
RNU6-40P-201ENST00000384254 H0YAA0 97 aa-0.71□□□□□ -2.52
RNU6-40P-201ENST00000384254 CYB5AP00167 134 aa-0.71□□□□□ -2.52
RNU6-40P-201ENST00000384254 COX7BP24311 80 aa-0.71□□□□□ -2.52
RNU6-40P-201ENST00000384254 C20orf78Q9BR46 151 aa-0.71□□□□□ -2.52
RNU6-40P-201ENST00000384254 Q9H521 79 aa-0.71□□□□□ -2.52
RNU6-40P-201ENST00000384254 ALKQ9UM73 1620 aa-0.73□□□□□ -2.53
RNU6-40P-201ENST00000384254 MT1AP04731 61 aa-0.73□□□□□ -2.53
RNU6-40P-201ENST00000384254 MYO3AQ8NEV4 1616 aa-0.74□□□□□ -2.53
RNU6-40P-201ENST00000384254 RGPD4Q7Z3J3 1758 aa-0.74□□□□□ -2.53
RNU6-40P-201ENST00000384254 IQCF6A8MYZ5 107 aa-0.75□□□□□ -2.53
RNU6-40P-201ENST00000384254 GAFA1Q96PS6 74 aa-0.75□□□□□ -2.53
RNU6-40P-201ENST00000384254 LYNX1G3V0Z9 82 aa-0.76□□□□□ -2.53
RNU6-40P-201ENST00000384254 MT1XP80297 61 aa-0.76□□□□□ -2.53
RNU6-40P-201ENST00000384254 TIAM2Q8IVF5 1701 aa-0.77□□□□□ -2.53
RNU6-40P-201ENST00000384254 LRRC7Q96NW7 1537 aa-0.77□□□□□ -2.53
RNU6-40P-201ENST00000384254 TROQ12816 1431 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-40P-201ENST00000384254 H0YGG7 62 aa-0.77□□□□□ -2.53
RNU6-40P-201ENST00000384254 PYY3Q5JQD4 70 aa-0.77□□□□□ -2.53
RNU6-40P-201ENST00000384254 DEFB104AQ8WTQ1 72 aa-0.77□□□□□ -2.53
RNU6-40P-201ENST00000384254 LRRC9Q6ZRR7 1453 aa-0.78□□□□□ -2.53
RNU6-40P-201ENST00000384254 COX6B2Q6YFQ2 88 aa-0.78□□□□□ -2.53
RNU6-40P-201ENST00000384254 RGPD3A6NKT7 1758 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-40P-201ENST00000384254 PREX1Q8TCU6 1659 aa-0.78□□□□□ -2.53
RNU6-40P-201ENST00000384254 ATP7BP35670 1465 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms