RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SMR3BP02814 79 aaPredicted RBP3.18□□□□□ -1.9
PTPRD-203ENST00000381196 KRTAP10-11P60412 298 aa3.17□□□□□ -1.9
PTPRD-203ENST00000381196 DSPP15924 2871 aaKnown RBP3.17□□□□□ -1.9
PTPRD-203ENST00000381196 IGFL1Q6UW32 110 aa3.17□□□□□ -1.9
PTPRD-203ENST00000381196 CAMK2N1Q7Z7J9 78 aa3.17□□□□□ -1.9
PTPRD-203ENST00000381196 A6NN06 94 aa3.16□□□□□ -1.9
PTPRD-203ENST00000381196 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.9
PTPRD-203ENST00000381196 Q8N377 158 aa3.15□□□□□ -1.9
PTPRD-203ENST00000381196 CELSR2Q9HCU4 2923 aa3.15□□□□□ -1.91
PTPRD-203ENST00000381196 A0A087WTM6 91 aa3.14□□□□□ -1.91
PTPRD-203ENST00000381196 C19orf73Q9NVV2 129 aa3.14□□□□□ -1.91
PTPRD-203ENST00000381196 DSCR10P59022 87 aa3.14□□□□□ -1.91
PTPRD-203ENST00000381196 A0A0C4DFX4 3053 aa3.14□□□□□ -1.91
PTPRD-203ENST00000381196 HRES1P13985 223 aa3.14□□□□□ -1.91
PTPRD-203ENST00000381196 C9orf163Q8N9P6 203 aa3.13□□□□□ -1.91
PTPRD-203ENST00000381196 H3BS24 57 aa3.13□□□□□ -1.91
PTPRD-203ENST00000381196 PRR26Q8N8Z3 221 aa3.12□□□□□ -1.91
PTPRD-203ENST00000381196 RPS29P62273 56 aaKnown RBP3.12□□□□□ -1.91
PTPRD-203ENST00000381196 CHD7Q9P2D1 2997 aa3.12□□□□□ -1.91
PTPRD-203ENST00000381196 M0R2T5 61 aa3.12□□□□□ -1.91
PTPRD-203ENST00000381196 A0A1W2PNM2 257 aa3.12□□□□□ -1.91
PTPRD-203ENST00000381196 CASC10Q5T4H9 136 aa3.11□□□□□ -1.91
PTPRD-203ENST00000381196 A0A096LNT2 108 aa3.11□□□□□ -1.91
PTPRD-203ENST00000381196 SEC61BP60468 96 aaKnown RBP3.1□□□□□ -1.91
PTPRD-203ENST00000381196 LINC00472Q9H8W2 130 aa3.1□□□□□ -1.91
PTPRD-203ENST00000381196 A0A0D9SG42 100 aa3.1□□□□□ -1.91
PTPRD-203ENST00000381196 C9orf92A6NGG3 77 aa3.1□□□□□ -1.91
PTPRD-203ENST00000381196 ROMO1P60602 79 aa3.1□□□□□ -1.91
PTPRD-203ENST00000381196 OXTP01178 125 aa3.09□□□□□ -1.91
PTPRD-203ENST00000381196 ZNF861PO60384 105 aa3.09□□□□□ -1.91
PTPRD-203ENST00000381196 MMP24-AS1A0A0U1RRL7 71 aa3.09□□□□□ -1.91
PTPRD-203ENST00000381196 IGLV7-43P04211 117 aa3.09□□□□□ -1.92
PTPRD-203ENST00000381196 KRTAP29-1A8MX34 341 aaPredicted RBP3.08□□□□□ -1.92
PTPRD-203ENST00000381196 Q6ZSA8 131 aa3.08□□□□□ -1.92
PTPRD-203ENST00000381196 PSORS1C2Q9UIG4 136 aa3.07□□□□□ -1.92
PTPRD-203ENST00000381196 KRTAP10-3P60369 221 aa3.07□□□□□ -1.92
PTPRD-203ENST00000381196 TGP01266 2768 aa3.07□□□□□ -1.92
PTPRD-203ENST00000381196 A0A1B0GU33 70 aa3.07□□□□□ -1.92
PTPRD-203ENST00000381196 FAM168BA1KXE4 195 aa3.07□□□□□ -1.92
PTPRD-203ENST00000381196 KRTAP1-1Q07627 177 aa3.07□□□□□ -1.92
PTPRD-203ENST00000381196 MXRA5Q9NR99 2828 aa3.06□□□□□ -1.92
PTPRD-203ENST00000381196 KRTAP1-3Q8IUG1 177 aa3.05□□□□□ -1.92
PTPRD-203ENST00000381196 GIG44P09565 113 aaPredicted RBP3.04□□□□□ -1.92
PTPRD-203ENST00000381196 CYSTM1Q9H1C7 97 aa3.04□□□□□ -1.92
PTPRD-203ENST00000381196 CSAG1Q6PB30 78 aa3.04□□□□□ -1.92
PTPRD-203ENST00000381196 TENM4Q6N022 2769 aa3.04□□□□□ -1.92
PTPRD-203ENST00000381196 SPINK7P58062 85 aa3.04□□□□□ -1.92
PTPRD-203ENST00000381196 KRTAP4-16G5E9R7 235 aaPredicted RBP3.03□□□□□ -1.92
PTPRD-203ENST00000381196 DNAH12Q6ZR08 3092 aa3.03□□□□□ -1.92
PTPRD-203ENST00000381196 PDZD2O15018 2839 aa3.03□□□□□ -1.93
PTPRD-203ENST00000381196 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.02□□□□□ -1.93
PTPRD-203ENST00000381196 KRTAP16-1A8MUX0 517 aa3.02□□□□□ -1.93
PTPRD-203ENST00000381196 Q5VSD8 79 aa3.02□□□□□ -1.93
PTPRD-203ENST00000381196 PLAC8Q9NZF1 115 aa3.02□□□□□ -1.93
PTPRD-203ENST00000381196 Q8N1X5 172 aa3.01□□□□□ -1.93
PTPRD-203ENST00000381196 PLAC4Q8WY50 150 aa3.01□□□□□ -1.93
PTPRD-203ENST00000381196 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
PTPRD-203ENST00000381196 TNRC18O15417 2968 aaPredicted RBP3□□□□□ -1.93
PTPRD-203ENST00000381196 LRBAP50851 2863 aa3□□□□□ -1.93
PTPRD-203ENST00000381196 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
PTPRD-203ENST00000381196 SRRM2Q9UQ35 2752 aaKnown RBP2.99□□□□□ -1.93
PTPRD-203ENST00000381196 S4R3F8 94 aa2.99□□□□□ -1.93
PTPRD-203ENST00000381196 RPL37P61927 97 aaKnown RBP2.99□□□□□ -1.93
PTPRD-203ENST00000381196 ZANQ9Y493 2812 aa2.98□□□□□ -1.93
PTPRD-203ENST00000381196 R4GN34 69 aa2.98□□□□□ -1.93
PTPRD-203ENST00000381196 H1FX-AS1Q4G0G2 97 aa2.98□□□□□ -1.93
PTPRD-203ENST00000381196 Q5W150 140 aa2.97□□□□□ -1.93
PTPRD-203ENST00000381196 A0A1W2PNN7 141 aa2.97□□□□□ -1.93
PTPRD-203ENST00000381196 FRYLO94915 3013 aa2.97□□□□□ -1.93
PTPRD-203ENST00000381196 M0QZ58 72 aa2.96□□□□□ -1.94
PTPRD-203ENST00000381196 HRNRQ86YZ3 2850 aaPredicted RBP2.96□□□□□ -1.94
PTPRD-203ENST00000381196 KRTAP26-1Q6PEX3 210 aa2.95□□□□□ -1.94
PTPRD-203ENST00000381196 TENM2Q9NT68 2774 aa2.92□□□□□ -1.94
PTPRD-203ENST00000381196 KRTAP21-3Q3LHN1 58 aa2.91□□□□□ -1.94
PTPRD-203ENST00000381196 A0A0G2JQZ4 141 aa2.91□□□□□ -1.94
PTPRD-203ENST00000381196 PANO1I0J062 215 aa2.91□□□□□ -1.94
PTPRD-203ENST00000381196 VWFP04275 2813 aa2.9□□□□□ -1.95
PTPRD-203ENST00000381196 NBEAQ8NFP9 2946 aa2.9□□□□□ -1.95
PTPRD-203ENST00000381196 ZZEF1O43149 2961 aa2.9□□□□□ -1.95
PTPRD-203ENST00000381196 PRAC1Q96KF2 57 aa2.89□□□□□ -1.95
PTPRD-203ENST00000381196 PKD1L1Q8TDX9 2849 aa2.89□□□□□ -1.95
PTPRD-203ENST00000381196 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
PTPRD-203ENST00000381196 KRTAP10-1P60331 282 aa2.88□□□□□ -1.95
PTPRD-203ENST00000381196 A8MUU9 505 aa2.87□□□□□ -1.95
PTPRD-203ENST00000381196 CEP350Q5VT06 3117 aa2.87□□□□□ -1.95
PTPRD-203ENST00000381196 DCHS2Q6V1P9 2916 aa2.87□□□□□ -1.95
PTPRD-203ENST00000381196 MGAQ8IWI9 3026 aa2.86□□□□□ -1.95
PTPRD-203ENST00000381196 KRTAP13-1Q8IUC0 172 aa2.86□□□□□ -1.95
PTPRD-203ENST00000381196 RYR2Q92736 4967 aa2.86□□□□□ -1.95
PTPRD-203ENST00000381196 KRTAP10-2P60368 255 aa2.86□□□□□ -1.95
PTPRD-203ENST00000381196 Q8NDZ9 215 aa2.85□□□□□ -1.95
PTPRD-203ENST00000381196 RYR1P21817 5038 aa2.84□□□□□ -1.95
PTPRD-203ENST00000381196 C20orf166-AS1Q96NR2 134 aa2.84□□□□□ -1.96
PTPRD-203ENST00000381196 TACC2O95359 2948 aa2.83□□□□□ -1.96
PTPRD-203ENST00000381196 CRYBG3Q68DQ2 2970 aa2.83□□□□□ -1.96
PTPRD-203ENST00000381196 KRTAP1-5Q9BYS1 174 aa2.83□□□□□ -1.96
PTPRD-203ENST00000381196 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
PTPRD-203ENST00000381196 SRCAPQ6ZRS2 3230 aa2.81□□□□□ -1.96
PTPRD-203ENST00000381196 HTTP42858 3142 aa2.8□□□□□ -1.96
PTPRD-203ENST00000381196 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms