RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 A0A1W2PNM2 257 aa7.94□□□□□ -1.14
CDX2-201ENST00000381020 BCE1O60756 84 aa7.94□□□□□ -1.14
CDX2-201ENST00000381020 CRYGAP11844 174 aa7.94□□□□□ -1.14
CDX2-201ENST00000381020 IGFL1Q6UW32 110 aa7.94□□□□□ -1.14
CDX2-201ENST00000381020 LINC00208Q96KT6 92 aa7.94□□□□□ -1.14
CDX2-201ENST00000381020 ANAPC11Q9NYG5 84 aa7.94□□□□□ -1.14
CDX2-201ENST00000381020 IGHV6-1A0A0B4J1U7 121 aa7.93□□□□□ -1.14
CDX2-201ENST00000381020 CASC2Q6XLA1 102 aa7.92□□□□□ -1.14
CDX2-201ENST00000381020 HCG22E2RYF7 251 aa7.92□□□□□ -1.14
CDX2-201ENST00000381020 K7EQZ3 153 aa7.91□□□□□ -1.14
CDX2-201ENST00000381020 SPTSSBQ8NFR3 76 aa7.91□□□□□ -1.14
CDX2-201ENST00000381020 WWC2-AS2Q96NR7 200 aa7.91□□□□□ -1.14
CDX2-201ENST00000381020 IGLV5-37A0A075B6J1 123 aa7.9□□□□□ -1.14
CDX2-201ENST00000381020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
CDX2-201ENST00000381020 IGLV5-48A0A075B6I7 105 aa7.88□□□□□ -1.15
CDX2-201ENST00000381020 NDUFC1O43677 76 aa7.88□□□□□ -1.15
CDX2-201ENST00000381020 PSORS1C2Q9UIG4 136 aa7.86□□□□□ -1.15
CDX2-201ENST00000381020 TGP01266 2768 aa7.85□□□□□ -1.15
CDX2-201ENST00000381020 TNP2Q05952 138 aa7.85□□□□□ -1.15
CDX2-201ENST00000381020 PCOTHQ58A44 107 aa7.85□□□□□ -1.15
CDX2-201ENST00000381020 A0A1B0GW54 56 aa7.84□□□□□ -1.15
CDX2-201ENST00000381020 SPRR1AP35321 89 aa7.84□□□□□ -1.15
CDX2-201ENST00000381020 RETNLBQ9BQ08 111 aa7.83□□□□□ -1.16
CDX2-201ENST00000381020 PANO1I0J062 215 aa7.82□□□□□ -1.16
CDX2-201ENST00000381020 SERP1Q9Y6X1 66 aa7.81□□□□□ -1.16
CDX2-201ENST00000381020 H0Y9P7 68 aa7.81□□□□□ -1.16
CDX2-201ENST00000381020 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
CDX2-201ENST00000381020 ZNF861PO60384 105 aa7.8□□□□□ -1.16
CDX2-201ENST00000381020 C4orf26Q17RF5 130 aa7.8□□□□□ -1.16
CDX2-201ENST00000381020 KRTAP7-1Q8IUC3 87 aa7.79□□□□□ -1.16
CDX2-201ENST00000381020 SMIM26A0A096LP01 95 aa7.78□□□□□ -1.16
CDX2-201ENST00000381020 hDV103S1A0JD37 113 aa7.77□□□□□ -1.17
CDX2-201ENST00000381020 KRTAP4-16G5E9R7 235 aaPredicted RBP7.77□□□□□ -1.17
CDX2-201ENST00000381020 CHKB-CPT1BH3BT56 60 aa7.77□□□□□ -1.17
CDX2-201ENST00000381020 SPACA4Q8TDM5 124 aa7.77□□□□□ -1.17
CDX2-201ENST00000381020 SPRR4Q96PI1 79 aa7.76□□□□□ -1.17
CDX2-201ENST00000381020 PSPHP1O15172 72 aa7.76□□□□□ -1.17
CDX2-201ENST00000381020 AKAP9Q99996 3911 aa7.75□□□□□ -1.17
CDX2-201ENST00000381020 ATP5EP56381 51 aaPredicted RBP7.75□□□□□ -1.17
CDX2-201ENST00000381020 C1orf64Q8NEQ6 169 aa7.74□□□□□ -1.17
CDX2-201ENST00000381020 A8MWP4 228 aa7.74□□□□□ -1.17
CDX2-201ENST00000381020 DSCR10P59022 87 aa7.74□□□□□ -1.17
CDX2-201ENST00000381020 KRTAP11-1Q8IUC1 163 aa7.74□□□□□ -1.17
CDX2-201ENST00000381020 SMR3BP02814 79 aaPredicted RBP7.73□□□□□ -1.17
CDX2-201ENST00000381020 H7BZZ5 65 aa7.73□□□□□ -1.17
CDX2-201ENST00000381020 PRR15Q8IV56 129 aa7.72□□□□□ -1.17
CDX2-201ENST00000381020 IGLV7-43P04211 117 aa7.72□□□□□ -1.17
CDX2-201ENST00000381020 KLKP1Q107X0 134 aa7.7□□□□□ -1.18
CDX2-201ENST00000381020 PLA2G1BP04054 148 aaKnown RBP7.69□□□□□ -1.18
CDX2-201ENST00000381020 RPS28P62857 69 aaKnown RBP7.67□□□□□ -1.18
CDX2-201ENST00000381020 TRAV22A0A0B4J277 110 aa7.66□□□□□ -1.18
CDX2-201ENST00000381020 Q6ZRN7 208 aaPredicted RBP7.66□□□□□ -1.18
CDX2-201ENST00000381020 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
CDX2-201ENST00000381020 OCR1Q9BZK8 76 aa7.66□□□□□ -1.18
CDX2-201ENST00000381020 KRTAP10-2P60368 255 aa7.65□□□□□ -1.18
CDX2-201ENST00000381020 PLAC8Q9NZF1 115 aa7.64□□□□□ -1.19
CDX2-201ENST00000381020 Q6ZR54 194 aa7.63□□□□□ -1.19
CDX2-201ENST00000381020 C8orf17Q9NRJ1 99 aa7.63□□□□□ -1.19
CDX2-201ENST00000381020 C1orf195Q5TG92 126 aa7.62□□□□□ -1.19
CDX2-201ENST00000381020 DMBT1Q9UGM3 2413 aaPredicted RBP7.62□□□□□ -1.19
CDX2-201ENST00000381020 CSMD3Q7Z407 3707 aa7.62□□□□□ -1.19
CDX2-201ENST00000381020 A6NED7 52 aa7.61□□□□□ -1.19
CDX2-201ENST00000381020 PRR15LQ9BU68 103 aa7.61□□□□□ -1.19
CDX2-201ENST00000381020 V9GYY9 64 aa7.61□□□□□ -1.19
CDX2-201ENST00000381020 SRRM2Q9UQ35 2752 aaKnown RBP7.61□□□□□ -1.19
CDX2-201ENST00000381020 LIMD2Q9BT23 127 aa7.61□□□□□ -1.19
CDX2-201ENST00000381020 IGKV2D-30A0A075B6S6 120 aa7.6□□□□□ -1.19
CDX2-201ENST00000381020 A0A1B0GVX0 72 aa7.6□□□□□ -1.19
CDX2-201ENST00000381020 IGKV2-30P06310 120 aa7.6□□□□□ -1.19
CDX2-201ENST00000381020 LINC00313P59037 77 aa7.6□□□□□ -1.19
CDX2-201ENST00000381020 SSBP3-AS1Q7Z2R9 100 aa7.6□□□□□ -1.19
CDX2-201ENST00000381020 MRPL34Q9BQ48 92 aaKnown RBP7.6□□□□□ -1.19
CDX2-201ENST00000381020 TP53AIP1Q9HCN2 124 aa7.59□□□□□ -1.19
CDX2-201ENST00000381020 SPRR1BP22528 89 aa7.59□□□□□ -1.19
CDX2-201ENST00000381020 PMAIP1Q13794 54 aa7.58□□□□□ -1.2
CDX2-201ENST00000381020 IGLV8-61A0A075B6I0 122 aa7.57□□□□□ -1.2
CDX2-201ENST00000381020 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
CDX2-201ENST00000381020 SPINK1P00995 79 aa7.55□□□□□ -1.2
CDX2-201ENST00000381020 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
CDX2-201ENST00000381020 SPAG11AQ6PDA7 123 aa7.52□□□□□ -1.21
CDX2-201ENST00000381020 Q96NJ1 140 aa7.52□□□□□ -1.21
CDX2-201ENST00000381020 H3BPC8 53 aa7.51□□□□□ -1.21
CDX2-201ENST00000381020 OXTP01178 125 aa7.5□□□□□ -1.21
CDX2-201ENST00000381020 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
CDX2-201ENST00000381020 LINC00336Q6ZUF6 198 aa7.49□□□□□ -1.21
CDX2-201ENST00000381020 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
CDX2-201ENST00000381020 FLG2Q5D862 2391 aaPredicted RBP7.49□□□□□ -1.21
CDX2-201ENST00000381020 A8MUN3 132 aa7.48□□□□□ -1.21
CDX2-201ENST00000381020 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
CDX2-201ENST00000381020 LINC00304Q8N9R0 145 aa7.47□□□□□ -1.21
CDX2-201ENST00000381020 FBN3Q75N90 2809 aa7.47□□□□□ -1.21
CDX2-201ENST00000381020 FAM229AH3BQW9 127 aa7.47□□□□□ -1.21
CDX2-201ENST00000381020 C8orf87E5RJ46 101 aa7.45□□□□□ -1.22
CDX2-201ENST00000381020 C9orf92A6NGG3 77 aa7.45□□□□□ -1.22
CDX2-201ENST00000381020 FAM229BQ4G0N7 80 aa7.44□□□□□ -1.22
CDX2-201ENST00000381020 A0A087X002 238 aa7.43□□□□□ -1.22
CDX2-201ENST00000381020 COA5Q86WW8 74 aa7.43□□□□□ -1.22
CDX2-201ENST00000381020 KRTAP13-1Q8IUC0 172 aa7.43□□□□□ -1.22
CDX2-201ENST00000381020 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
CDX2-201ENST00000381020 LINC00483Q53H64 154 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms