RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ST20-AS1Q8NBB2 130 aa6.58□□□□□ -1.36
POLR2J3-201ENST00000379340 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
POLR2J3-201ENST00000379340 F8WEM9 126 aa6.57□□□□□ -1.36
POLR2J3-201ENST00000379340 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
POLR2J3-201ENST00000379340 Q6ZR54 194 aa6.57□□□□□ -1.36
POLR2J3-201ENST00000379340 A0A087WTM6 91 aa6.57□□□□□ -1.36
POLR2J3-201ENST00000379340 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
POLR2J3-201ENST00000379340 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
POLR2J3-201ENST00000379340 EPM2AB3EWF7 344 aa6.56□□□□□ -1.36
POLR2J3-201ENST00000379340 NREPQ16612 68 aa6.56□□□□□ -1.36
POLR2J3-201ENST00000379340 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
POLR2J3-201ENST00000379340 Q8NBF4 154 aa6.56□□□□□ -1.36
POLR2J3-201ENST00000379340 PRLHP81277 87 aa6.55□□□□□ -1.36
POLR2J3-201ENST00000379340 SPRR4Q96PI1 79 aa6.55□□□□□ -1.36
POLR2J3-201ENST00000379340 IGLV8-61A0A075B6I0 122 aa6.54□□□□□ -1.36
POLR2J3-201ENST00000379340 SMIM29Q86T20 159 aa6.54□□□□□ -1.36
POLR2J3-201ENST00000379340 SMIM20Q8N5G0 67 aa6.54□□□□□ -1.36
POLR2J3-201ENST00000379340 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
POLR2J3-201ENST00000379340 A0A1W2PNM2 257 aa6.53□□□□□ -1.36
POLR2J3-201ENST00000379340 SPRR1BP22528 89 aa6.53□□□□□ -1.36
POLR2J3-201ENST00000379340 C9orf153Q5TBE3 101 aa6.53□□□□□ -1.36
POLR2J3-201ENST00000379340 HIGD2AQ9BW72 106 aa6.53□□□□□ -1.36
POLR2J3-201ENST00000379340 UBE2AP49459 152 aa6.52□□□□□ -1.36
POLR2J3-201ENST00000379340 VPS13DQ5THJ4 4388 aa6.52□□□□□ -1.37
POLR2J3-201ENST00000379340 CRYGAP11844 174 aa6.52□□□□□ -1.37
POLR2J3-201ENST00000379340 BPY2O14599 106 aa6.51□□□□□ -1.37
POLR2J3-201ENST00000379340 RTL8CO15255 209 aa6.51□□□□□ -1.37
POLR2J3-201ENST00000379340 C1orf134Q5TEV5 83 aa6.51□□□□□ -1.37
POLR2J3-201ENST00000379340 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
POLR2J3-201ENST00000379340 DPH3Q96FX2 82 aa6.51□□□□□ -1.37
POLR2J3-201ENST00000379340 PANO1I0J062 215 aa6.49□□□□□ -1.37
POLR2J3-201ENST00000379340 SCXQ7RTU7 201 aa6.49□□□□□ -1.37
POLR2J3-201ENST00000379340 IGFL1Q6UW32 110 aa6.48□□□□□ -1.37
POLR2J3-201ENST00000379340 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
POLR2J3-201ENST00000379340 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.48□□□□□ -1.37
POLR2J3-201ENST00000379340 TRAV7A0A075B6U4 112 aa6.48□□□□□ -1.37
POLR2J3-201ENST00000379340 A0A1B0GVY2 172 aa6.48□□□□□ -1.37
POLR2J3-201ENST00000379340 IGKV4-1P06312 121 aa6.48□□□□□ -1.37
POLR2J3-201ENST00000379340 PLAC8Q9NZF1 115 aa6.47□□□□□ -1.37
POLR2J3-201ENST00000379340 PKHD1P08F94 4074 aa6.47□□□□□ -1.37
POLR2J3-201ENST00000379340 DNAH11Q96DT5 4516 aa6.46□□□□□ -1.37
POLR2J3-201ENST00000379340 IGLV5-52A0A0A0MRZ9 124 aa6.46□□□□□ -1.38
POLR2J3-201ENST00000379340 SS18L2Q9UHA2 77 aa6.45□□□□□ -1.38
POLR2J3-201ENST00000379340 DNAH17Q9UFH2 4485 aa6.45□□□□□ -1.38
POLR2J3-201ENST00000379340 FAT2Q9NYQ8 4349 aa6.45□□□□□ -1.38
POLR2J3-201ENST00000379340 DYNC1H1Q14204 4646 aaKnown RBP6.45□□□□□ -1.38
POLR2J3-201ENST00000379340 DNAH2Q9P225 4427 aa6.44□□□□□ -1.38
POLR2J3-201ENST00000379340 ZNF706Q9Y5V0 76 aaPredicted RBP6.44□□□□□ -1.38
POLR2J3-201ENST00000379340 DNAH6Q9C0G6 4158 aa6.43□□□□□ -1.38
POLR2J3-201ENST00000379340 RPL37AP61513 92 aaKnown RBP6.43□□□□□ -1.38
POLR2J3-201ENST00000379340 HERC1Q15751 4861 aa6.42□□□□□ -1.38
POLR2J3-201ENST00000379340 LINC00483Q53H64 154 aa6.41□□□□□ -1.38
POLR2J3-201ENST00000379340 TMEM258P61165 79 aa6.4□□□□□ -1.38
POLR2J3-201ENST00000379340 Q8N9L7 120 aa6.4□□□□□ -1.38
POLR2J3-201ENST00000379340 PKD1P98161 4303 aa6.4□□□□□ -1.38
POLR2J3-201ENST00000379340 A0A087WSZ3 146 aa6.4□□□□□ -1.39
POLR2J3-201ENST00000379340 DSCR10P59022 87 aa6.4□□□□□ -1.39
POLR2J3-201ENST00000379340 PSORS1C2Q9UIG4 136 aa6.4□□□□□ -1.39
POLR2J3-201ENST00000379340 ZNF861PO60384 105 aa6.38□□□□□ -1.39
POLR2J3-201ENST00000379340 C20orf197Q8N268 126 aa6.38□□□□□ -1.39
POLR2J3-201ENST00000379340 HSPG2P98160 4391 aa6.37□□□□□ -1.39
POLR2J3-201ENST00000379340 KLKP1Q107X0 134 aa6.37□□□□□ -1.39
POLR2J3-201ENST00000379340 LINC00336Q6ZUF6 198 aa6.37□□□□□ -1.39
POLR2J3-201ENST00000379340 A0A0G2JQZ4 141 aa6.36□□□□□ -1.39
POLR2J3-201ENST00000379340 K7EQZ3 153 aa6.35□□□□□ -1.39
POLR2J3-201ENST00000379340 OCR1Q9BZK8 76 aa6.35□□□□□ -1.39
POLR2J3-201ENST00000379340 NDUFC1O43677 76 aa6.35□□□□□ -1.39
POLR2J3-201ENST00000379340 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
POLR2J3-201ENST00000379340 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
POLR2J3-201ENST00000379340 J3KT08 172 aa6.34□□□□□ -1.39
POLR2J3-201ENST00000379340 IGLV7-43P04211 117 aa6.33□□□□□ -1.4
POLR2J3-201ENST00000379340 DMBT1Q9UGM3 2413 aaPredicted RBP6.33□□□□□ -1.4
POLR2J3-201ENST00000379340 IGLV9-49A0A0B4J1Y8 123 aa6.32□□□□□ -1.4
POLR2J3-201ENST00000379340 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
POLR2J3-201ENST00000379340 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
POLR2J3-201ENST00000379340 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
POLR2J3-201ENST00000379340 A8MWP4 228 aa6.31□□□□□ -1.4
POLR2J3-201ENST00000379340 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
POLR2J3-201ENST00000379340 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
POLR2J3-201ENST00000379340 Q6ZSA8 131 aa6.3□□□□□ -1.4
POLR2J3-201ENST00000379340 H7BZZ5 65 aa6.29□□□□□ -1.4
POLR2J3-201ENST00000379340 PRR15Q8IV56 129 aa6.29□□□□□ -1.4
POLR2J3-201ENST00000379340 CIRBP-AS1Q8TBR5 109 aa6.29□□□□□ -1.4
POLR2J3-201ENST00000379340 A0A0U1RQV1 116 aa6.28□□□□□ -1.4
POLR2J3-201ENST00000379340 MOBPQ13875 183 aa6.28□□□□□ -1.4
POLR2J3-201ENST00000379340 DEFB116Q30KQ4 102 aa6.28□□□□□ -1.4
POLR2J3-201ENST00000379340 SNURFQ9Y675 71 aa6.28□□□□□ -1.4
POLR2J3-201ENST00000379340 LRP1BQ9NZR2 4599 aa6.28□□□□□ -1.4
POLR2J3-201ENST00000379340 FAM236DA0A1B0GTK5 79 aa6.27□□□□□ -1.41
POLR2J3-201ENST00000379340 NDUFB1O75438 58 aa6.27□□□□□ -1.41
POLR2J3-201ENST00000379340 FAM236CP0DP71 79 aa6.27□□□□□ -1.41
POLR2J3-201ENST00000379340 ATP5EP56381 51 aaPredicted RBP6.27□□□□□ -1.41
POLR2J3-201ENST00000379340 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
POLR2J3-201ENST00000379340 Q8N1X5 172 aa6.27□□□□□ -1.41
POLR2J3-201ENST00000379340 C5orf47Q569G3 176 aa6.26□□□□□ -1.41
POLR2J3-201ENST00000379340 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
POLR2J3-201ENST00000379340 CDK2AP2O75956 126 aa6.25□□□□□ -1.41
POLR2J3-201ENST00000379340 CD164Q04900 197 aa6.25□□□□□ -1.41
POLR2J3-201ENST00000379340 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
POLR2J3-201ENST00000379340 UBR4Q5T4S7 5183 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms