RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 A0A1B0GU33 70 aa6.69□□□□□ -1.34
LINC00654-201ENST00000379053 KRTAP1-5Q9BYS1 174 aa6.68□□□□□ -1.34
LINC00654-201ENST00000379053 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
LINC00654-201ENST00000379053 AKAP13Q12802 2813 aa6.67□□□□□ -1.34
LINC00654-201ENST00000379053 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
LINC00654-201ENST00000379053 FP248Q71RG6 208 aaPredicted RBP6.67□□□□□ -1.34
LINC00654-201ENST00000379053 Q75L30 129 aa6.65□□□□□ -1.34
LINC00654-201ENST00000379053 SPINK7P58062 85 aa6.65□□□□□ -1.34
LINC00654-201ENST00000379053 NBEAL1Q6ZS30 2694 aa6.65□□□□□ -1.35
LINC00654-201ENST00000379053 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
LINC00654-201ENST00000379053 R4GN34 69 aa6.64□□□□□ -1.35
LINC00654-201ENST00000379053 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
LINC00654-201ENST00000379053 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
LINC00654-201ENST00000379053 SPRR1AP35321 89 aa6.63□□□□□ -1.35
LINC00654-201ENST00000379053 MMP24-AS1A0A0U1RRL7 71 aa6.63□□□□□ -1.35
LINC00654-201ENST00000379053 CHD6Q8TD26 2715 aa6.61□□□□□ -1.35
LINC00654-201ENST00000379053 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
LINC00654-201ENST00000379053 UNC79Q9P2D8 2635 aa6.6□□□□□ -1.35
LINC00654-201ENST00000379053 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.36
LINC00654-201ENST00000379053 SPRR1BP22528 89 aa6.58□□□□□ -1.36
LINC00654-201ENST00000379053 NOTCH1P46531 2555 aa6.58□□□□□ -1.36
LINC00654-201ENST00000379053 Q5W150 140 aa6.58□□□□□ -1.36
LINC00654-201ENST00000379053 Q8NDZ9 215 aa6.58□□□□□ -1.36
LINC00654-201ENST00000379053 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
LINC00654-201ENST00000379053 Q5VV11 94 aa6.55□□□□□ -1.36
LINC00654-201ENST00000379053 DNAH12Q6ZR08 3092 aa6.55□□□□□ -1.36
LINC00654-201ENST00000379053 UTRNP46939 3433 aa6.54□□□□□ -1.36
LINC00654-201ENST00000379053 LINC00472Q9H8W2 130 aa6.53□□□□□ -1.36
LINC00654-201ENST00000379053 C5orf42Q9H799 3197 aa6.51□□□□□ -1.37
LINC00654-201ENST00000379053 Q6ZR54 194 aa6.51□□□□□ -1.37
LINC00654-201ENST00000379053 DMBT1Q9UGM3 2413 aaPredicted RBP6.51□□□□□ -1.37
LINC00654-201ENST00000379053 KRTAP26-1Q6PEX3 210 aa6.5□□□□□ -1.37
LINC00654-201ENST00000379053 STAB2Q8WWQ8 2551 aa6.5□□□□□ -1.37
LINC00654-201ENST00000379053 M0QZ58 72 aa6.49□□□□□ -1.37
LINC00654-201ENST00000379053 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
LINC00654-201ENST00000379053 PANO1I0J062 215 aa6.47□□□□□ -1.37
LINC00654-201ENST00000379053 ZNF292O60281 2723 aa6.47□□□□□ -1.37
LINC00654-201ENST00000379053 CHD7Q9P2D1 2997 aa6.44□□□□□ -1.38
LINC00654-201ENST00000379053 GCN1Q92616 2671 aaKnown RBP6.43□□□□□ -1.38
LINC00654-201ENST00000379053 A0A087X002 238 aa6.42□□□□□ -1.38
LINC00654-201ENST00000379053 MGAQ8IWI9 3026 aa6.41□□□□□ -1.38
LINC00654-201ENST00000379053 UBR5O95071 2799 aaPredicted RBP6.4□□□□□ -1.38
LINC00654-201ENST00000379053 IGSF10Q6WRI0 2623 aa6.39□□□□□ -1.39
LINC00654-201ENST00000379053 ADM2Q7Z4H4 148 aa6.38□□□□□ -1.39
LINC00654-201ENST00000379053 RPL37P61927 97 aaKnown RBP6.38□□□□□ -1.39
LINC00654-201ENST00000379053 NSD1Q96L73 2696 aaPredicted RBP6.36□□□□□ -1.39
LINC00654-201ENST00000379053 MAP1AP78559 2803 aaPredicted RBP6.34□□□□□ -1.39
LINC00654-201ENST00000379053 DSPP15924 2871 aaKnown RBP6.33□□□□□ -1.4
LINC00654-201ENST00000379053 CHD9Q3L8U1 2897 aa6.33□□□□□ -1.4
LINC00654-201ENST00000379053 RANBP2P49792 3224 aaKnown RBP6.32□□□□□ -1.4
LINC00654-201ENST00000379053 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
LINC00654-201ENST00000379053 PCNTO95613 3336 aa6.32□□□□□ -1.4
LINC00654-201ENST00000379053 KRTAP4-16G5E9R7 235 aaPredicted RBP6.31□□□□□ -1.4
LINC00654-201ENST00000379053 ROMO1P60602 79 aa6.3□□□□□ -1.4
LINC00654-201ENST00000379053 HTTP42858 3142 aa6.3□□□□□ -1.4
LINC00654-201ENST00000379053 Q6ZRN7 208 aaPredicted RBP6.29□□□□□ -1.4
LINC00654-201ENST00000379053 NBEAL2Q6ZNJ1 2754 aa6.29□□□□□ -1.4
LINC00654-201ENST00000379053 ITPR2Q14571 2701 aa6.27□□□□□ -1.41
LINC00654-201ENST00000379053 RPS29P62273 56 aaKnown RBP6.27□□□□□ -1.41
LINC00654-201ENST00000379053 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
LINC00654-201ENST00000379053 FRYQ5TBA9 3013 aa6.26□□□□□ -1.41
LINC00654-201ENST00000379053 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
LINC00654-201ENST00000379053 A0A0C4DFX4 3053 aa6.25□□□□□ -1.41
LINC00654-201ENST00000379053 C20orf166-AS1Q96NR2 134 aa6.24□□□□□ -1.41
LINC00654-201ENST00000379053 CFAP54Q96N23 3096 aa6.24□□□□□ -1.41
LINC00654-201ENST00000379053 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
LINC00654-201ENST00000379053 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
LINC00654-201ENST00000379053 WDFY4Q6ZS81 3184 aa6.22□□□□□ -1.41
LINC00654-201ENST00000379053 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
LINC00654-201ENST00000379053 REV3LO60673 3130 aa6.22□□□□□ -1.41
LINC00654-201ENST00000379053 BRCA2P51587 3418 aa6.21□□□□□ -1.42
LINC00654-201ENST00000379053 TENM4Q6N022 2769 aa6.2□□□□□ -1.42
LINC00654-201ENST00000379053 A8MUU9 505 aa6.2□□□□□ -1.42
LINC00654-201ENST00000379053 KRTAP29-1A8MX34 341 aaPredicted RBP6.19□□□□□ -1.42
LINC00654-201ENST00000379053 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
LINC00654-201ENST00000379053 ITPR1Q14643 2758 aa6.18□□□□□ -1.42
LINC00654-201ENST00000379053 A6NN06 94 aa6.17□□□□□ -1.42
LINC00654-201ENST00000379053 KMT2BQ9UMN6 2715 aaPredicted RBP6.16□□□□□ -1.42
LINC00654-201ENST00000379053 LAMA3Q16787 3333 aa6.16□□□□□ -1.42
LINC00654-201ENST00000379053 PRUNE2Q8WUY3 3088 aa6.16□□□□□ -1.42
LINC00654-201ENST00000379053 TRANK1O15050 2925 aa6.13□□□□□ -1.43
LINC00654-201ENST00000379053 HIVEP1P15822 2718 aa6.12□□□□□ -1.43
LINC00654-201ENST00000379053 FLNCQ14315 2725 aa6.11□□□□□ -1.43
LINC00654-201ENST00000379053 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
LINC00654-201ENST00000379053 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
LINC00654-201ENST00000379053 TACC2O95359 2948 aa6.08□□□□□ -1.44
LINC00654-201ENST00000379053 TRIOO75962 3097 aa6.08□□□□□ -1.44
LINC00654-201ENST00000379053 KRTAP13-1Q8IUC0 172 aa6.07□□□□□ -1.44
LINC00654-201ENST00000379053 A8MU10 97 aa6.07□□□□□ -1.44
LINC00654-201ENST00000379053 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
LINC00654-201ENST00000379053 LAMA2P24043 3122 aaKnown RBP6.06□□□□□ -1.44
LINC00654-201ENST00000379053 UTP20O75691 2785 aaKnown RBP6.02□□□□□ -1.45
LINC00654-201ENST00000379053 MKI67P46013 3256 aaKnown RBP6.02□□□□□ -1.45
LINC00654-201ENST00000379053 CRYBG3Q68DQ2 2970 aa6.01□□□□□ -1.45
LINC00654-201ENST00000379053 TNP1P09430 55 aa5.99□□□□□ -1.45
LINC00654-201ENST00000379053 FREM2Q5SZK8 3169 aa5.99□□□□□ -1.45
LINC00654-201ENST00000379053 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.46
LINC00654-201ENST00000379053 A0A1B0GVY2 172 aa5.95□□□□□ -1.46
LINC00654-201ENST00000379053 XIRP2A4UGR9 3374 aa5.94□□□□□ -1.46
LINC00654-201ENST00000379053 DMXL2Q8TDJ6 3036 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms