RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 LITAFQ99732 161 aa9.65□□□□□ -0.86
PDLIM4-202ENST00000379018 A0A0B4J2C4 111 aa9.64□□□□□ -0.87
PDLIM4-202ENST00000379018 H3BUT2 72 aa9.64□□□□□ -0.87
PDLIM4-202ENST00000379018 IFITM1P13164 125 aa9.63□□□□□ -0.87
PDLIM4-202ENST00000379018 TRBV10-2A0A0K0K1G8 114 aa9.62□□□□□ -0.87
PDLIM4-202ENST00000379018 LYRM7Q5U5X0 104 aa9.62□□□□□ -0.87
PDLIM4-202ENST00000379018 LIMD2Q9BT23 127 aa9.62□□□□□ -0.87
PDLIM4-202ENST00000379018 TRAV23DV6A0A075B6W5 121 aa9.61□□□□□ -0.87
PDLIM4-202ENST00000379018 COPS9Q8WXC6 57 aa9.61□□□□□ -0.87
PDLIM4-202ENST00000379018 COX6B2Q6YFQ2 88 aa9.6□□□□□ -0.87
PDLIM4-202ENST00000379018 SPCS1Q9Y6A9 102 aa9.6□□□□□ -0.87
PDLIM4-202ENST00000379018 K7ERJ3 54 aa9.59□□□□□ -0.87
PDLIM4-202ENST00000379018 IGLV6-57P01721 117 aa9.59□□□□□ -0.87
PDLIM4-202ENST00000379018 NPC2P61916 151 aa9.59□□□□□ -0.87
PDLIM4-202ENST00000379018 RAB37Q96AX2 223 aa9.59□□□□□ -0.87
PDLIM4-202ENST00000379018 ZNF73O43830 326 aaPredicted RBP9.57□□□□□ -0.88
PDLIM4-202ENST00000379018 CFC1P0CG37 223 aa9.57□□□□□ -0.88
PDLIM4-202ENST00000379018 LOC107984156A0A0G2JMH3 177 aa9.56□□□□□ -0.88
PDLIM4-202ENST00000379018 ARL17AQ8IVW1 177 aa9.56□□□□□ -0.88
PDLIM4-202ENST00000379018 PRO1854Q9UHT4 67 aa9.56□□□□□ -0.88
PDLIM4-202ENST00000379018 TRBV20-1A0A075B6N2 111 aa9.55□□□□□ -0.88
PDLIM4-202ENST00000379018 A4D1N5 150 aa9.54□□□□□ -0.88
PDLIM4-202ENST00000379018 F8W1H4 67 aa9.54□□□□□ -0.88
PDLIM4-202ENST00000379018 H7C2G1 150 aa9.54□□□□□ -0.88
PDLIM4-202ENST00000379018 MUSTN1Q8IVN3 82 aa9.54□□□□□ -0.88
PDLIM4-202ENST00000379018 NDUFC2O95298 119 aa9.52□□□□□ -0.89
PDLIM4-202ENST00000379018 SOSTDC1Q6X4U4 206 aa9.51□□□□□ -0.89
PDLIM4-202ENST00000379018 LAMTOR3Q9UHA4 124 aa9.51□□□□□ -0.89
PDLIM4-202ENST00000379018 EIF4EBP3O60516 100 aaPredicted RBP9.5□□□□□ -0.89
PDLIM4-202ENST00000379018 ADAMTSL4-AS1Q5T5F5 129 aa9.5□□□□□ -0.89
PDLIM4-202ENST00000379018 Q1RN00 199 aa9.49□□□□□ -0.89
PDLIM4-202ENST00000379018 NAA38Q9BRA0 125 aaKnown RBP9.49□□□□□ -0.89
PDLIM4-202ENST00000379018 FLGP20930 4061 aaPredicted RBP9.49□□□□□ -0.89
PDLIM4-202ENST00000379018 OR13C6PQ8NH95 151 aa9.48□□□□□ -0.89
PDLIM4-202ENST00000379018 LINC00308Q8TCZ7 52 aa9.48□□□□□ -0.89
PDLIM4-202ENST00000379018 PRO0461Q9UI25 63 aa9.48□□□□□ -0.89
PDLIM4-202ENST00000379018 K7ERU9 68 aa9.47□□□□□ -0.89
PDLIM4-202ENST00000379018 SPRR1BP22528 89 aa9.47□□□□□ -0.89
PDLIM4-202ENST00000379018 DEFB105AQ8NG35 78 aa9.47□□□□□ -0.89
PDLIM4-202ENST00000379018 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.9
PDLIM4-202ENST00000379018 OCIAD2Q56VL3 154 aa9.46□□□□□ -0.9
PDLIM4-202ENST00000379018 DHRS4-AS1Q9P1J3 65 aa9.44□□□□□ -0.9
PDLIM4-202ENST00000379018 KRTAP9-7A8MTY7 169 aa9.43□□□□□ -0.9
PDLIM4-202ENST00000379018 H3BMG7 143 aa9.43□□□□□ -0.9
PDLIM4-202ENST00000379018 CBY1Q9Y3M2 126 aa9.43□□□□□ -0.9
PDLIM4-202ENST00000379018 A0A0G2JQZ4 141 aa9.42□□□□□ -0.9
PDLIM4-202ENST00000379018 Q6Q795 121 aa9.42□□□□□ -0.9
PDLIM4-202ENST00000379018 CD164Q04900 197 aa9.41□□□□□ -0.9
PDLIM4-202ENST00000379018 C1orf195Q5TG92 126 aa9.41□□□□□ -0.9
PDLIM4-202ENST00000379018 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.4□□□□□ -0.9
PDLIM4-202ENST00000379018 TCL1BO95988 128 aa9.4□□□□□ -0.9
PDLIM4-202ENST00000379018 COX6CP09669 75 aa9.4□□□□□ -0.9
PDLIM4-202ENST00000379018 COX7BP24311 80 aa9.39□□□□□ -0.91
PDLIM4-202ENST00000379018 ATXN8Q156A1 80 aa9.39□□□□□ -0.91
PDLIM4-202ENST00000379018 TRAV13-2A0A0B4J235 113 aa9.38□□□□□ -0.91
PDLIM4-202ENST00000379018 TRIAP1O43715 76 aa9.38□□□□□ -0.91
PDLIM4-202ENST00000379018 J3QR89 54 aa9.37□□□□□ -0.91
PDLIM4-202ENST00000379018 PSMB2P49721 201 aa9.36□□□□□ -0.91
PDLIM4-202ENST00000379018 ELOF1P60002 83 aaKnown RBP9.36□□□□□ -0.91
PDLIM4-202ENST00000379018 C6orf99Q4VX62 202 aa9.36□□□□□ -0.91
PDLIM4-202ENST00000379018 TEX49A0A1B0GTD5 131 aa9.35□□□□□ -0.91
PDLIM4-202ENST00000379018 LST1O00453 97 aa9.35□□□□□ -0.91
PDLIM4-202ENST00000379018 SCGB1C2P0DMR2 95 aa9.35□□□□□ -0.91
PDLIM4-202ENST00000379018 SMCPP49901 116 aaPredicted RBP9.35□□□□□ -0.91
PDLIM4-202ENST00000379018 SMIM29Q86T20 159 aa9.34□□□□□ -0.91
PDLIM4-202ENST00000379018 TEN1Q86WV5 123 aa9.34□□□□□ -0.91
PDLIM4-202ENST00000379018 H3BT86 120 aa9.33□□□□□ -0.92
PDLIM4-202ENST00000379018 Q5XG85 94 aa9.33□□□□□ -0.92
PDLIM4-202ENST00000379018 ETDBQ3ZM63 59 aa9.31□□□□□ -0.92
PDLIM4-202ENST00000379018 TRACP01848 142 aa9.3□□□□□ -0.92
PDLIM4-202ENST00000379018 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
PDLIM4-202ENST00000379018 PPDPFLQ8WWR9 84 aa9.28□□□□□ -0.92
PDLIM4-202ENST00000379018 C9JAW5 83 aa9.26□□□□□ -0.93
PDLIM4-202ENST00000379018 H0YGX0 51 aa9.26□□□□□ -0.93
PDLIM4-202ENST00000379018 A0A1B0GX51 115 aa9.25□□□□□ -0.93
PDLIM4-202ENST00000379018 ATP11AUNQ6ZP68 121 aa9.23□□□□□ -0.93
PDLIM4-202ENST00000379018 IGLV5-48A0A075B6I7 105 aa9.22□□□□□ -0.93
PDLIM4-202ENST00000379018 VPS25Q9BRG1 176 aa9.22□□□□□ -0.93
PDLIM4-202ENST00000379018 SSPOA2VEC9 5147 aa9.21□□□□□ -0.93
PDLIM4-202ENST00000379018 USH2AO75445 5202 aa9.21□□□□□ -0.93
PDLIM4-202ENST00000379018 OBSCN-AS1Q96MR7 158 aa9.21□□□□□ -0.94
PDLIM4-202ENST00000379018 MTURNQ8N3F0 131 aa9.2□□□□□ -0.94
PDLIM4-202ENST00000379018 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
PDLIM4-202ENST00000379018 TRBV7-6A0A0J9YX20 115 aa9.19□□□□□ -0.94
PDLIM4-202ENST00000379018 CLEC2BQ92478 149 aa9.19□□□□□ -0.94
PDLIM4-202ENST00000379018 FAM240AA0A1B0GVK7 77 aa9.18□□□□□ -0.94
PDLIM4-202ENST00000379018 F8WEM9 126 aa9.18□□□□□ -0.94
PDLIM4-202ENST00000379018 KRTAP9-8Q9BYQ0 159 aa9.16□□□□□ -0.94
PDLIM4-202ENST00000379018 Q75L30 129 aa9.15□□□□□ -0.94
PDLIM4-202ENST00000379018 SCGB1A1P11684 91 aa9.13□□□□□ -0.95
PDLIM4-202ENST00000379018 FAM218AQ96MZ4 157 aa9.13□□□□□ -0.95
PDLIM4-202ENST00000379018 H3BQ85 93 aa9.11□□□□□ -0.95
PDLIM4-202ENST00000379018 DNAL4O96015 105 aa9.11□□□□□ -0.95
PDLIM4-202ENST00000379018 TRBV7-7A0A0K0K1E9 115 aa9.1□□□□□ -0.95
PDLIM4-202ENST00000379018 ACYP1P07311 99 aa9.1□□□□□ -0.95
PDLIM4-202ENST00000379018 Q96NJ1 140 aa9.1□□□□□ -0.95
PDLIM4-202ENST00000379018 FCGBPQ9Y6R7 5405 aaPredicted RBP9.1□□□□□ -0.95
PDLIM4-202ENST00000379018 SIGMAR1Q99720 223 aa9.09□□□□□ -0.95
PDLIM4-202ENST00000379018 SNCGO76070 127 aa9.08□□□□□ -0.96
PDLIM4-202ENST00000379018 BAALC-AS2P0C853 105 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms