RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 H7C2G1 150 aa13.14□□□□□ -0.31
SDHAF1-201ENST00000378887 HRCT1Q6UXD1 115 aa13.14□□□□□ -0.31
SDHAF1-201ENST00000378887 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.14□□□□□ -0.31
SDHAF1-201ENST00000378887 HSD52Q0P140 79 aa13.12□□□□□ -0.31
SDHAF1-201ENST00000378887 RAB37Q96AX2 223 aa13.12□□□□□ -0.31
SDHAF1-201ENST00000378887 FAT4Q6V0I7 4981 aa13.12□□□□□ -0.31
SDHAF1-201ENST00000378887 CDIP1Q9H305 208 aa13.11□□□□□ -0.31
SDHAF1-201ENST00000378887 PRO1854Q9UHT4 67 aa13.11□□□□□ -0.31
SDHAF1-201ENST00000378887 UQCR10Q9UDW1 63 aa13.08□□□□□ -0.32
SDHAF1-201ENST00000378887 K7ERJ3 54 aa13.07□□□□□ -0.32
SDHAF1-201ENST00000378887 TRIAP1O43715 76 aa13.06□□□□□ -0.32
SDHAF1-201ENST00000378887 TMEM238LA0A1B0GVL6 79 aa13.05□□□□□ -0.32
SDHAF1-201ENST00000378887 A6NJY4 79 aa13.05□□□□□ -0.32
SDHAF1-201ENST00000378887 PPDPFLQ8WWR9 84 aa13.05□□□□□ -0.32
SDHAF1-201ENST00000378887 LIMD2Q9BT23 127 aa13.05□□□□□ -0.32
SDHAF1-201ENST00000378887 H0YGX0 51 aa13.04□□□□□ -0.32
SDHAF1-201ENST00000378887 IGFL1Q6UW32 110 aa13.04□□□□□ -0.32
SDHAF1-201ENST00000378887 C1orf195Q5TG92 126 aa13.03□□□□□ -0.32
SDHAF1-201ENST00000378887 OCIAD2Q56VL3 154 aa13.01□□□□□ -0.33
SDHAF1-201ENST00000378887 XP32Q5T750 250 aa13.01□□□□□ -0.33
SDHAF1-201ENST00000378887 KRTAP4-1Q9BYQ7 146 aa13□□□□□ -0.33
SDHAF1-201ENST00000378887 ASB16-AS1Q495Z4 193 aa12.99□□□□□ -0.33
SDHAF1-201ENST00000378887 A0A1B0GX51 115 aa12.97□□□□□ -0.33
SDHAF1-201ENST00000378887 CLEC2BQ92478 149 aa12.97□□□□□ -0.33
SDHAF1-201ENST00000378887 Q6JHZ5 121 aa12.96□□□□□ -0.33
SDHAF1-201ENST00000378887 H3BUT2 72 aa12.95□□□□□ -0.34
SDHAF1-201ENST00000378887 TRBV7-7A0A0K0K1E9 115 aa12.93□□□□□ -0.34
SDHAF1-201ENST00000378887 F8WEM9 126 aa12.93□□□□□ -0.34
SDHAF1-201ENST00000378887 SMIM6P0DI80 62 aa12.91□□□□□ -0.34
SDHAF1-201ENST00000378887 LOC105371267A0A1B0GV96 52 aa12.89□□□□□ -0.35
SDHAF1-201ENST00000378887 NDUFV3P56181 108 aaKnown RBP12.88□□□□□ -0.35
SDHAF1-201ENST00000378887 SNHG12Q9BXW3 62 aa12.88□□□□□ -0.35
SDHAF1-201ENST00000378887 Q6Q795 121 aa12.86□□□□□ -0.35
SDHAF1-201ENST00000378887 LCE2AQ5TA79 106 aaPredicted RBP12.85□□□□□ -0.35
SDHAF1-201ENST00000378887 C9orf92A6NGG3 77 aa12.83□□□□□ -0.36
SDHAF1-201ENST00000378887 TCL1BO95988 128 aa12.8□□□□□ -0.36
SDHAF1-201ENST00000378887 A0A1W2PNM2 257 aa12.78□□□□□ -0.36
SDHAF1-201ENST00000378887 PSMB2P49721 201 aa12.78□□□□□ -0.36
SDHAF1-201ENST00000378887 SEC61BP60468 96 aaKnown RBP12.78□□□□□ -0.36
SDHAF1-201ENST00000378887 H3BMG7 143 aa12.77□□□□□ -0.37
SDHAF1-201ENST00000378887 LST1O00453 97 aa12.77□□□□□ -0.37
SDHAF1-201ENST00000378887 SNCGO76070 127 aa12.76□□□□□ -0.37
SDHAF1-201ENST00000378887 FABP2P12104 132 aa12.75□□□□□ -0.37
SDHAF1-201ENST00000378887 Q96NJ1 140 aa12.75□□□□□ -0.37
SDHAF1-201ENST00000378887 TRACP01848 142 aa12.74□□□□□ -0.37
SDHAF1-201ENST00000378887 TEN1Q86WV5 123 aa12.74□□□□□ -0.37
SDHAF1-201ENST00000378887 ORMDL1Q9P0S3 153 aa12.74□□□□□ -0.37
SDHAF1-201ENST00000378887 KRTAP19-2Q3LHN2 52 aa12.72□□□□□ -0.37
SDHAF1-201ENST00000378887 COX6CP09669 75 aa12.71□□□□□ -0.37
SDHAF1-201ENST00000378887 M0R143 59 aa12.68□□□□□ -0.38
SDHAF1-201ENST00000378887 DNAL4O96015 105 aa12.68□□□□□ -0.38
SDHAF1-201ENST00000378887 GHRHP01286 108 aa12.68□□□□□ -0.38
SDHAF1-201ENST00000378887 PCOTHQ58A44 107 aa12.68□□□□□ -0.38
SDHAF1-201ENST00000378887 A0A087WSZ3 146 aa12.67□□□□□ -0.38
SDHAF1-201ENST00000378887 UBE2V1Q13404 147 aa12.67□□□□□ -0.38
SDHAF1-201ENST00000378887 NAA38Q9BRA0 125 aaKnown RBP12.67□□□□□ -0.38
SDHAF1-201ENST00000378887 TMEM256-PLSCR3K7ERE1 68 aa12.66□□□□□ -0.38
SDHAF1-201ENST00000378887 RPL37P61927 97 aaKnown RBP12.66□□□□□ -0.38
SDHAF1-201ENST00000378887 LCE2CQ5TA81 110 aa12.66□□□□□ -0.38
SDHAF1-201ENST00000378887 H3BQ85 93 aa12.65□□□□□ -0.38
SDHAF1-201ENST00000378887 A0A0U1RQV1 116 aa12.64□□□□□ -0.39
SDHAF1-201ENST00000378887 TRBV7-4A0A0J9YYF1 115 aa12.63□□□□□ -0.39
SDHAF1-201ENST00000378887 A0A1B0GV72 72 aa12.61□□□□□ -0.39
SDHAF1-201ENST00000378887 SS18L2Q9UHA2 77 aa12.6□□□□□ -0.39
SDHAF1-201ENST00000378887 SCGB1C2P0DMR2 95 aa12.59□□□□□ -0.39
SDHAF1-201ENST00000378887 TSTD3H0UI37 97 aa12.58□□□□□ -0.4
SDHAF1-201ENST00000378887 ANKRD29Q8N6D5 301 aa12.58□□□□□ -0.4
SDHAF1-201ENST00000378887 OBSCN-AS1Q96MR7 158 aa12.55□□□□□ -0.4
SDHAF1-201ENST00000378887 BAALC-AS2P0C853 105 aa12.53□□□□□ -0.4
SDHAF1-201ENST00000378887 LINC00472Q9H8W2 130 aa12.53□□□□□ -0.4
SDHAF1-201ENST00000378887 CCKP06307 115 aa12.51□□□□□ -0.41
SDHAF1-201ENST00000378887 Q75L30 129 aa12.5□□□□□ -0.41
SDHAF1-201ENST00000378887 ATXN8Q156A1 80 aa12.49□□□□□ -0.41
SDHAF1-201ENST00000378887 TAX1BP3O14907 124 aa12.48□□□□□ -0.41
SDHAF1-201ENST00000378887 C20orf166-AS1Q96NR2 134 aa12.47□□□□□ -0.41
SDHAF1-201ENST00000378887 FLGP20930 4061 aaPredicted RBP12.47□□□□□ -0.41
SDHAF1-201ENST00000378887 RBM3P98179 157 aaKnown RBP12.46□□□□□ -0.41
SDHAF1-201ENST00000378887 KRTAP16-1A8MUX0 517 aa12.45□□□□□ -0.42
SDHAF1-201ENST00000378887 BATFQ16520 125 aa12.45□□□□□ -0.42
SDHAF1-201ENST00000378887 A8MUU9 505 aa12.44□□□□□ -0.42
SDHAF1-201ENST00000378887 NOTCH2NLQ7Z3S9 236 aa12.42□□□□□ -0.42
SDHAF1-201ENST00000378887 C9orf118A6NHY6 69 aa12.41□□□□□ -0.42
SDHAF1-201ENST00000378887 DSCR10P59022 87 aa12.4□□□□□ -0.42
SDHAF1-201ENST00000378887 Q6ZQT0 140 aa12.4□□□□□ -0.42
SDHAF1-201ENST00000378887 DEFB116Q30KQ4 102 aa12.39□□□□□ -0.43
SDHAF1-201ENST00000378887 LOC110117498A0A087WWA1 95 aa12.38□□□□□ -0.43
SDHAF1-201ENST00000378887 TRBV20-1A0A075B6N2 111 aa12.37□□□□□ -0.43
SDHAF1-201ENST00000378887 IGKV4-1P06312 121 aa12.37□□□□□ -0.43
SDHAF1-201ENST00000378887 DSCR8Q96T75 97 aa12.37□□□□□ -0.43
SDHAF1-201ENST00000378887 MT1HP80294 61 aa12.36□□□□□ -0.43
SDHAF1-201ENST00000378887 SIGMAR1Q99720 223 aa12.36□□□□□ -0.43
SDHAF1-201ENST00000378887 A0A1W2PPM0 123 aa12.35□□□□□ -0.43
SDHAF1-201ENST00000378887 C9JAW5 83 aa12.34□□□□□ -0.43
SDHAF1-201ENST00000378887 JMJD7-PLA2G4BH0Y9G9 81 aa12.32□□□□□ -0.44
SDHAF1-201ENST00000378887 LYRM7Q5U5X0 104 aa12.32□□□□□ -0.44
SDHAF1-201ENST00000378887 VPS25Q9BRG1 176 aa12.32□□□□□ -0.44
SDHAF1-201ENST00000378887 C14orf132Q9NPU4 83 aa12.29□□□□□ -0.44
SDHAF1-201ENST00000378887 LINC00313P59037 77 aa12.26□□□□□ -0.45
SDHAF1-201ENST00000378887 MTURNQ8N3F0 131 aa12.26□□□□□ -0.45
SDHAF1-201ENST00000378887 ATP11AUNQ6ZP68 121 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms