RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 SZT2Q5T011 3432 aa10.55□□□□□ -0.72
ATXN2-201ENST00000377617 C9orf92A6NGG3 77 aa10.54□□□□□ -0.72
ATXN2-201ENST00000377617 PCSK5Q92824 1860 aa10.52□□□□□ -0.73
ATXN2-201ENST00000377617 A0A087WTM6 91 aa10.52□□□□□ -0.73
ATXN2-201ENST00000377617 FRYLO94915 3013 aa10.51□□□□□ -0.73
ATXN2-201ENST00000377617 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
ATXN2-201ENST00000377617 FLNBO75369 2602 aaKnown RBP10.48□□□□□ -0.73
ATXN2-201ENST00000377617 CASC10Q5T4H9 136 aa10.48□□□□□ -0.73
ATXN2-201ENST00000377617 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
ATXN2-201ENST00000377617 KRTAP24-1Q3LI83 254 aa10.48□□□□□ -0.73
ATXN2-201ENST00000377617 SPRR1AP35321 89 aa10.47□□□□□ -0.73
ATXN2-201ENST00000377617 LINC00472Q9H8W2 130 aa10.44□□□□□ -0.74
ATXN2-201ENST00000377617 LINC00483Q53H64 154 aa10.44□□□□□ -0.74
ATXN2-201ENST00000377617 COX6B2Q6YFQ2 88 aa10.41□□□□□ -0.74
ATXN2-201ENST00000377617 MAP1AP78559 2803 aaPredicted RBP10.41□□□□□ -0.74
ATXN2-201ENST00000377617 Q8NDZ9 215 aa10.4□□□□□ -0.74
ATXN2-201ENST00000377617 SPRR1BP22528 89 aa10.39□□□□□ -0.75
ATXN2-201ENST00000377617 Q5W150 140 aa10.36□□□□□ -0.75
ATXN2-201ENST00000377617 MGAQ8IWI9 3026 aa10.36□□□□□ -0.75
ATXN2-201ENST00000377617 KRTAP10-11P60412 298 aa10.35□□□□□ -0.75
ATXN2-201ENST00000377617 USP34Q70CQ2 3546 aa10.34□□□□□ -0.75
ATXN2-201ENST00000377617 CAMK2N1Q7Z7J9 78 aa10.33□□□□□ -0.75
ATXN2-201ENST00000377617 ROMO1P60602 79 aa10.32□□□□□ -0.76
ATXN2-201ENST00000377617 K7EIL1 84 aa10.32□□□□□ -0.76
ATXN2-201ENST00000377617 ZCCHC13Q8WW36 166 aaKnown RBP10.32□□□□□ -0.76
ATXN2-201ENST00000377617 ATRQ13535 2644 aa10.32□□□□□ -0.76
ATXN2-201ENST00000377617 MYO15AQ9UKN7 3530 aa10.31□□□□□ -0.76
ATXN2-201ENST00000377617 KRTAP16-1A8MUX0 517 aa10.31□□□□□ -0.76
ATXN2-201ENST00000377617 RPL37P61927 97 aaKnown RBP10.31□□□□□ -0.76
ATXN2-201ENST00000377617 WWC2-AS2Q96NR7 200 aa10.3□□□□□ -0.76
ATXN2-201ENST00000377617 REV3LO60673 3130 aa10.3□□□□□ -0.76
ATXN2-201ENST00000377617 KALRNO60229 2985 aa10.29□□□□□ -0.76
ATXN2-201ENST00000377617 TNP2Q05952 138 aa10.28□□□□□ -0.76
ATXN2-201ENST00000377617 A6NN06 94 aa10.28□□□□□ -0.76
ATXN2-201ENST00000377617 SPATA8Q6RVD6 105 aa10.24□□□□□ -0.77
ATXN2-201ENST00000377617 Q6ZR54 194 aa10.24□□□□□ -0.77
ATXN2-201ENST00000377617 KRTAP10-3P60369 221 aa10.23□□□□□ -0.77
ATXN2-201ENST00000377617 MAST4O15021 2626 aa10.23□□□□□ -0.77
ATXN2-201ENST00000377617 KRTAP29-1A8MX34 341 aaPredicted RBP10.21□□□□□ -0.78
ATXN2-201ENST00000377617 CENPEQ02224 2701 aa10.21□□□□□ -0.78
ATXN2-201ENST00000377617 CFAP47Q6ZTR5 3102 aa10.2□□□□□ -0.78
ATXN2-201ENST00000377617 AKAP13Q12802 2813 aa10.19□□□□□ -0.78
ATXN2-201ENST00000377617 KRTAP26-1Q6PEX3 210 aa10.16□□□□□ -0.78
ATXN2-201ENST00000377617 TACC2O95359 2948 aa10.16□□□□□ -0.78
ATXN2-201ENST00000377617 BOD1L1Q8NFC6 3051 aa10.16□□□□□ -0.78
ATXN2-201ENST00000377617 H1FX-AS1Q4G0G2 97 aa10.16□□□□□ -0.78
ATXN2-201ENST00000377617 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.16□□□□□ -0.78
ATXN2-201ENST00000377617 HECTD1Q9ULT8 2610 aa10.15□□□□□ -0.78
ATXN2-201ENST00000377617 SMR3BP02814 79 aaPredicted RBP10.14□□□□□ -0.79
ATXN2-201ENST00000377617 DMBT1Q9UGM3 2413 aaPredicted RBP10.13□□□□□ -0.79
ATXN2-201ENST00000377617 ADGRG4Q8IZF6 3080 aa10.13□□□□□ -0.79
ATXN2-201ENST00000377617 Q6ZSA8 131 aa10.12□□□□□ -0.79
ATXN2-201ENST00000377617 COL6A3P12111 3177 aa10.12□□□□□ -0.79
ATXN2-201ENST00000377617 J3QL48 77 aa10.11□□□□□ -0.79
ATXN2-201ENST00000377617 S4R3F8 94 aa10.11□□□□□ -0.79
ATXN2-201ENST00000377617 STAB1Q9NY15 2570 aa10.11□□□□□ -0.79
ATXN2-201ENST00000377617 LCE6AA0A183 80 aa10.09□□□□□ -0.79
ATXN2-201ENST00000377617 KRTAP25-1Q3LHN0 102 aa10.09□□□□□ -0.79
ATXN2-201ENST00000377617 PLAC8Q9NZF1 115 aa10.09□□□□□ -0.79
ATXN2-201ENST00000377617 NBEAL1Q6ZS30 2694 aa10.07□□□□□ -0.8
ATXN2-201ENST00000377617 R4GN34 69 aa10.05□□□□□ -0.8
ATXN2-201ENST00000377617 EYSQ5T1H1 3165 aa10.04□□□□□ -0.8
ATXN2-201ENST00000377617 A0A087X002 238 aa10.03□□□□□ -0.8
ATXN2-201ENST00000377617 FLNAP21333 2647 aaKnown RBP10.03□□□□□ -0.8
ATXN2-201ENST00000377617 ZNF292O60281 2723 aa10.02□□□□□ -0.81
ATXN2-201ENST00000377617 KRTAP4-16G5E9R7 235 aaPredicted RBP10.01□□□□□ -0.81
ATXN2-201ENST00000377617 DMXL2Q8TDJ6 3036 aa10.01□□□□□ -0.81
ATXN2-201ENST00000377617 CHD6Q8TD26 2715 aa9.99□□□□□ -0.81
ATXN2-201ENST00000377617 WDFY3Q8IZQ1 3526 aa9.99□□□□□ -0.81
ATXN2-201ENST00000377617 NOTCH1P46531 2555 aa9.98□□□□□ -0.81
ATXN2-201ENST00000377617 DCHS1Q96JQ0 3298 aa9.95□□□□□ -0.82
ATXN2-201ENST00000377617 UNC79Q9P2D8 2635 aa9.94□□□□□ -0.82
ATXN2-201ENST00000377617 SPTBN5Q9NRC6 3674 aaKnown RBP9.93□□□□□ -0.82
ATXN2-201ENST00000377617 KRTAP1-3Q8IUG1 177 aa9.93□□□□□ -0.82
ATXN2-201ENST00000377617 ITPR3Q14573 2671 aa9.93□□□□□ -0.82
ATXN2-201ENST00000377617 ADM2Q7Z4H4 148 aa9.93□□□□□ -0.82
ATXN2-201ENST00000377617 KRTAP1-1Q07627 177 aa9.91□□□□□ -0.82
ATXN2-201ENST00000377617 NDUFAF8A1L188 74 aa9.9□□□□□ -0.83
ATXN2-201ENST00000377617 ASH1LQ9NR48 2969 aaKnown RBP9.89□□□□□ -0.83
ATXN2-201ENST00000377617 STAB2Q8WWQ8 2551 aa9.89□□□□□ -0.83
ATXN2-201ENST00000377617 A8MU10 97 aa9.88□□□□□ -0.83
ATXN2-201ENST00000377617 GCN1Q92616 2671 aaKnown RBP9.87□□□□□ -0.83
ATXN2-201ENST00000377617 LRBAP50851 2863 aa9.87□□□□□ -0.83
ATXN2-201ENST00000377617 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
ATXN2-201ENST00000377617 PANO1I0J062 215 aa9.85□□□□□ -0.83
ATXN2-201ENST00000377617 LOC400499M0QZD8 3231 aa9.84□□□□□ -0.83
ATXN2-201ENST00000377617 ZZEF1O43149 2961 aa9.83□□□□□ -0.84
ATXN2-201ENST00000377617 DMXL1Q9Y485 3027 aa9.82□□□□□ -0.84
ATXN2-201ENST00000377617 M0QZ58 72 aa9.82□□□□□ -0.84
ATXN2-201ENST00000377617 ATMQ13315 3056 aa9.82□□□□□ -0.84
ATXN2-201ENST00000377617 ITPR1Q14643 2758 aa9.81□□□□□ -0.84
ATXN2-201ENST00000377617 HELZ2Q9BYK8 2649 aaKnown RBP9.79□□□□□ -0.84
ATXN2-201ENST00000377617 NOTCH2NLQ7Z3S9 236 aa9.73□□□□□ -0.85
ATXN2-201ENST00000377617 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
ATXN2-201ENST00000377617 COL6A5A8TX70 2615 aa9.72□□□□□ -0.85
ATXN2-201ENST00000377617 TNRC18O15417 2968 aaPredicted RBP9.71□□□□□ -0.85
ATXN2-201ENST00000377617 PLAC4Q8WY50 150 aa9.69□□□□□ -0.86
ATXN2-201ENST00000377617 CFAP46Q8IYW2 2715 aa9.69□□□□□ -0.86
ATXN2-201ENST00000377617 SETXQ7Z333 2677 aaKnown RBP9.68□□□□□ -0.86
ATXN2-201ENST00000377617 KRTAP11-1Q8IUC1 163 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms