RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
CRNKL1-201ENST00000377327 MGAM2Q2M2H8 2515 aa5.79□□□□□ -1.48
CRNKL1-201ENST00000377327 IGLV8-61A0A075B6I0 122 aa5.78□□□□□ -1.48
CRNKL1-201ENST00000377327 MDFIQ99750 246 aa5.78□□□□□ -1.48
CRNKL1-201ENST00000377327 NBEAL2Q6ZNJ1 2754 aa5.78□□□□□ -1.48
CRNKL1-201ENST00000377327 SETXQ7Z333 2677 aaKnown RBP5.77□□□□□ -1.49
CRNKL1-201ENST00000377327 UNC79Q9P2D8 2635 aa5.77□□□□□ -1.49
CRNKL1-201ENST00000377327 FAM229AH3BQW9 127 aa5.77□□□□□ -1.49
CRNKL1-201ENST00000377327 ITPR3Q14573 2671 aa5.77□□□□□ -1.49
CRNKL1-201ENST00000377327 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
CRNKL1-201ENST00000377327 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
CRNKL1-201ENST00000377327 ZZEF1O43149 2961 aa5.76□□□□□ -1.49
CRNKL1-201ENST00000377327 LINC00313P59037 77 aa5.76□□□□□ -1.49
CRNKL1-201ENST00000377327 RELNP78509 3460 aa5.75□□□□□ -1.49
CRNKL1-201ENST00000377327 CNBPP62633 177 aaKnown RBP5.74□□□□□ -1.49
CRNKL1-201ENST00000377327 CASC10Q5T4H9 136 aa5.74□□□□□ -1.49
CRNKL1-201ENST00000377327 TEP1Q99973 2627 aaKnown RBP5.74□□□□□ -1.49
CRNKL1-201ENST00000377327 SPRR1AP35321 89 aa5.74□□□□□ -1.49
CRNKL1-201ENST00000377327 KRTAP10-3P60369 221 aa5.74□□□□□ -1.49
CRNKL1-201ENST00000377327 ZCCHC13Q8WW36 166 aaKnown RBP5.74□□□□□ -1.49
CRNKL1-201ENST00000377327 LRBAP50851 2863 aa5.73□□□□□ -1.49
CRNKL1-201ENST00000377327 ITPR1Q14643 2758 aa5.72□□□□□ -1.49
CRNKL1-201ENST00000377327 IGLV5-52A0A0A0MRZ9 124 aa5.72□□□□□ -1.49
CRNKL1-201ENST00000377327 NUPR2A6NF83 97 aa5.71□□□□□ -1.49
CRNKL1-201ENST00000377327 HELZ2Q9BYK8 2649 aaKnown RBP5.71□□□□□ -1.49
CRNKL1-201ENST00000377327 CFAP46Q8IYW2 2715 aa5.71□□□□□ -1.5
CRNKL1-201ENST00000377327 TNP2Q05952 138 aa5.7□□□□□ -1.5
CRNKL1-201ENST00000377327 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
CRNKL1-201ENST00000377327 MMP24-AS1A0A0U1RRL7 71 aa5.69□□□□□ -1.5
CRNKL1-201ENST00000377327 BAHCC1Q9P281 2608 aa5.69□□□□□ -1.5
CRNKL1-201ENST00000377327 SPINK7P58062 85 aa5.68□□□□□ -1.5
CRNKL1-201ENST00000377327 C9orf163Q8N9P6 203 aa5.68□□□□□ -1.5
CRNKL1-201ENST00000377327 SPACA4Q8TDM5 124 aa5.68□□□□□ -1.5
CRNKL1-201ENST00000377327 PRAC1Q96KF2 57 aa5.68□□□□□ -1.5
CRNKL1-201ENST00000377327 COL12A1Q99715 3063 aa5.67□□□□□ -1.5
CRNKL1-201ENST00000377327 KRTAP1-3Q8IUG1 177 aa5.67□□□□□ -1.5
CRNKL1-201ENST00000377327 LINC00472Q9H8W2 130 aa5.67□□□□□ -1.5
CRNKL1-201ENST00000377327 LCE6AA0A183 80 aa5.67□□□□□ -1.5
CRNKL1-201ENST00000377327 HRES1P13985 223 aa5.67□□□□□ -1.5
CRNKL1-201ENST00000377327 DCHS2Q6V1P9 2916 aa5.66□□□□□ -1.5
CRNKL1-201ENST00000377327 ASH1LQ9NR48 2969 aaKnown RBP5.66□□□□□ -1.5
CRNKL1-201ENST00000377327 NBDYA0A0U1RRE5 68 aa5.65□□□□□ -1.5
CRNKL1-201ENST00000377327 KRTAP26-1Q6PEX3 210 aa5.65□□□□□ -1.5
CRNKL1-201ENST00000377327 TEX15Q9BXT5 2789 aa5.65□□□□□ -1.51
CRNKL1-201ENST00000377327 IGSF10Q6WRI0 2623 aa5.65□□□□□ -1.51
CRNKL1-201ENST00000377327 KRTAP10-11P60412 298 aa5.64□□□□□ -1.51
CRNKL1-201ENST00000377327 KRTAP29-1A8MX34 341 aaPredicted RBP5.63□□□□□ -1.51
CRNKL1-201ENST00000377327 ZNF861PO60384 105 aa5.63□□□□□ -1.51
CRNKL1-201ENST00000377327 LY6G6CO95867 125 aa5.63□□□□□ -1.51
CRNKL1-201ENST00000377327 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
CRNKL1-201ENST00000377327 H3BS24 57 aa5.63□□□□□ -1.51
CRNKL1-201ENST00000377327 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
CRNKL1-201ENST00000377327 SSBP3-AS1Q7Z2R9 100 aa5.62□□□□□ -1.51
CRNKL1-201ENST00000377327 RTL8CO15255 209 aa5.62□□□□□ -1.51
CRNKL1-201ENST00000377327 KRTAP1-1Q07627 177 aa5.62□□□□□ -1.51
CRNKL1-201ENST00000377327 C1orf134Q5TEV5 83 aa5.62□□□□□ -1.51
CRNKL1-201ENST00000377327 HRNRQ86YZ3 2850 aaPredicted RBP5.62□□□□□ -1.51
CRNKL1-201ENST00000377327 SPRR1BP22528 89 aa5.61□□□□□ -1.51
CRNKL1-201ENST00000377327 KRTAP24-1Q3LI83 254 aa5.61□□□□□ -1.51
CRNKL1-201ENST00000377327 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
CRNKL1-201ENST00000377327 VPS13CQ709C8 3753 aa5.6□□□□□ -1.51
CRNKL1-201ENST00000377327 Q96NJ1 140 aa5.6□□□□□ -1.51
CRNKL1-201ENST00000377327 A8MU10 97 aa5.6□□□□□ -1.51
CRNKL1-201ENST00000377327 NOTCH1P46531 2555 aa5.59□□□□□ -1.51
CRNKL1-201ENST00000377327 A6NN06 94 aa5.59□□□□□ -1.52
CRNKL1-201ENST00000377327 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
CRNKL1-201ENST00000377327 ZFHX3Q15911 3703 aa5.57□□□□□ -1.52
CRNKL1-201ENST00000377327 SVEP1Q4LDE5 3571 aa5.56□□□□□ -1.52
CRNKL1-201ENST00000377327 CSAG1Q6PB30 78 aa5.55□□□□□ -1.52
CRNKL1-201ENST00000377327 Q6ZR54 194 aa5.54□□□□□ -1.52
CRNKL1-201ENST00000377327 NBEAL1Q6ZS30 2694 aa5.54□□□□□ -1.52
CRNKL1-201ENST00000377327 FLNCQ14315 2725 aa5.54□□□□□ -1.52
CRNKL1-201ENST00000377327 UBR5O95071 2799 aaPredicted RBP5.53□□□□□ -1.52
CRNKL1-201ENST00000377327 STAB1Q9NY15 2570 aa5.53□□□□□ -1.52
CRNKL1-201ENST00000377327 TYMSOSQ8TAI1 123 aa5.53□□□□□ -1.52
CRNKL1-201ENST00000377327 COL6A5A8TX70 2615 aa5.53□□□□□ -1.52
CRNKL1-201ENST00000377327 CSMD1Q96PZ7 3565 aa5.53□□□□□ -1.52
CRNKL1-201ENST00000377327 K7EIL1 84 aa5.51□□□□□ -1.53
CRNKL1-201ENST00000377327 Q8N1X5 172 aa5.51□□□□□ -1.53
CRNKL1-201ENST00000377327 IGLV7-43P04211 117 aa5.51□□□□□ -1.53
CRNKL1-201ENST00000377327 ASB16-AS1Q495Z4 193 aa5.51□□□□□ -1.53
CRNKL1-201ENST00000377327 A0A087WTM6 91 aa5.51□□□□□ -1.53
CRNKL1-201ENST00000377327 CSMD2Q7Z408 3487 aa5.49□□□□□ -1.53
CRNKL1-201ENST00000377327 ZANQ9Y493 2812 aa5.49□□□□□ -1.53
CRNKL1-201ENST00000377327 UTP20O75691 2785 aaKnown RBP5.48□□□□□ -1.53
CRNKL1-201ENST00000377327 Q5W150 140 aa5.48□□□□□ -1.53
CRNKL1-201ENST00000377327 PLA2G1BP04054 148 aaKnown RBP5.48□□□□□ -1.53
CRNKL1-201ENST00000377327 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
CRNKL1-201ENST00000377327 APLNQ9ULZ1 77 aa5.47□□□□□ -1.53
CRNKL1-201ENST00000377327 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.47□□□□□ -1.53
CRNKL1-201ENST00000377327 CRIPTQ9P021 101 aa5.46□□□□□ -1.53
CRNKL1-201ENST00000377327 A0A1B0GU33 70 aa5.46□□□□□ -1.54
CRNKL1-201ENST00000377327 CRYBG3Q68DQ2 2970 aa5.45□□□□□ -1.54
CRNKL1-201ENST00000377327 CELSR2Q9HCU4 2923 aa5.45□□□□□ -1.54
CRNKL1-201ENST00000377327 KMT2BQ9UMN6 2715 aaPredicted RBP5.45□□□□□ -1.54
CRNKL1-201ENST00000377327 SPATA8Q6RVD6 105 aa5.45□□□□□ -1.54
CRNKL1-201ENST00000377327 APCP25054 2843 aa5.45□□□□□ -1.54
CRNKL1-201ENST00000377327 CELSR1Q9NYQ6 3014 aa5.44□□□□□ -1.54
CRNKL1-201ENST00000377327 KRTAP7-1Q8IUC3 87 aa5.44□□□□□ -1.54
CRNKL1-201ENST00000377327 WWC2-AS2Q96NR7 200 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms