RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 LOC110117498A0A087WWA1 95 aa7.1□□□□□ -1.27
HDAC6-203ENST00000376619 OBSCN-AS1Q96MR7 158 aa7.1□□□□□ -1.27
HDAC6-203ENST00000376619 A0A0U1RQV1 116 aa7.09□□□□□ -1.27
HDAC6-203ENST00000376619 TMEM258P61165 79 aa7.09□□□□□ -1.27
HDAC6-203ENST00000376619 KRTAP26-1Q6PEX3 210 aa7.09□□□□□ -1.27
HDAC6-203ENST00000376619 BRK1Q8WUW1 75 aa7.09□□□□□ -1.27
HDAC6-203ENST00000376619 CASC2Q6XLA1 102 aa7.09□□□□□ -1.27
HDAC6-203ENST00000376619 IGFL1Q6UW32 110 aa7.09□□□□□ -1.28
HDAC6-203ENST00000376619 TRBV7-4A0A0J9YYF1 115 aa7.08□□□□□ -1.28
HDAC6-203ENST00000376619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-203ENST00000376619 CXCL6P80162 114 aa7.07□□□□□ -1.28
HDAC6-203ENST00000376619 C9orf163Q8N9P6 203 aa7.05□□□□□ -1.28
HDAC6-203ENST00000376619 HCG22E2RYF7 251 aa7.05□□□□□ -1.28
HDAC6-203ENST00000376619 SMR3BP02814 79 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-203ENST00000376619 PKIGQ9Y2B9 76 aa7.05□□□□□ -1.28
HDAC6-203ENST00000376619 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
HDAC6-203ENST00000376619 PANO1I0J062 215 aa7.04□□□□□ -1.28
HDAC6-203ENST00000376619 CRYGAP11844 174 aa7.04□□□□□ -1.28
HDAC6-203ENST00000376619 A0A087WTM6 91 aa7.04□□□□□ -1.28
HDAC6-203ENST00000376619 F8WDY8 70 aa7.03□□□□□ -1.28
HDAC6-203ENST00000376619 SPACA4Q8TDM5 124 aa7.03□□□□□ -1.28
HDAC6-203ENST00000376619 PSPHP1O15172 72 aa7.03□□□□□ -1.28
HDAC6-203ENST00000376619 C4orf26Q17RF5 130 aa7.03□□□□□ -1.28
HDAC6-203ENST00000376619 TNP2Q05952 138 aa7.02□□□□□ -1.29
HDAC6-203ENST00000376619 DNHD1Q96M86 4753 aa7.01□□□□□ -1.29
HDAC6-203ENST00000376619 PSORS1C2Q9UIG4 136 aa7.01□□□□□ -1.29
HDAC6-203ENST00000376619 H0Y9P7 68 aa7.01□□□□□ -1.29
HDAC6-203ENST00000376619 BCE1O60756 84 aa7□□□□□ -1.29
HDAC6-203ENST00000376619 TLX1NBP0CAT3 122 aa6.98□□□□□ -1.29
HDAC6-203ENST00000376619 MEGF8Q7Z7M0 2845 aa6.98□□□□□ -1.29
HDAC6-203ENST00000376619 CHKB-CPT1BH3BT56 60 aa6.97□□□□□ -1.29
HDAC6-203ENST00000376619 SPTSSBQ8NFR3 76 aa6.97□□□□□ -1.29
HDAC6-203ENST00000376619 ZNF706Q9Y5V0 76 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-203ENST00000376619 KRTAP11-1Q8IUC1 163 aa6.96□□□□□ -1.29
HDAC6-203ENST00000376619 C1orf64Q8NEQ6 169 aa6.96□□□□□ -1.3
HDAC6-203ENST00000376619 LINC01600Q96MT4 127 aa6.96□□□□□ -1.3
HDAC6-203ENST00000376619 hDV103S1A0JD37 113 aa6.94□□□□□ -1.3
HDAC6-203ENST00000376619 KRTAP7-1Q8IUC3 87 aa6.94□□□□□ -1.3
HDAC6-203ENST00000376619 SPINK1P00995 79 aa6.93□□□□□ -1.3
HDAC6-203ENST00000376619 CNBPP62633 177 aaKnown RBP6.93□□□□□ -1.3
HDAC6-203ENST00000376619 NDUFC1O43677 76 aa6.93□□□□□ -1.3
HDAC6-203ENST00000376619 IGLV5-48A0A075B6I7 105 aa6.92□□□□□ -1.3
HDAC6-203ENST00000376619 H7BZZ5 65 aa6.92□□□□□ -1.3
HDAC6-203ENST00000376619 IGKV2D-30A0A075B6S6 120 aa6.91□□□□□ -1.3
HDAC6-203ENST00000376619 IGKV2-30P06310 120 aa6.91□□□□□ -1.3
HDAC6-203ENST00000376619 DSCR10P59022 87 aa6.91□□□□□ -1.3
HDAC6-203ENST00000376619 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
HDAC6-203ENST00000376619 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
HDAC6-203ENST00000376619 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
HDAC6-203ENST00000376619 ZNF861PO60384 105 aa6.88□□□□□ -1.31
HDAC6-203ENST00000376619 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
HDAC6-203ENST00000376619 PRR15Q8IV56 129 aa6.86□□□□□ -1.31
HDAC6-203ENST00000376619 SPRR1AP35321 89 aa6.86□□□□□ -1.31
HDAC6-203ENST00000376619 SPRR4Q96PI1 79 aa6.85□□□□□ -1.31
HDAC6-203ENST00000376619 SEC61GP60059 68 aa6.85□□□□□ -1.31
HDAC6-203ENST00000376619 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
HDAC6-203ENST00000376619 A8MWP4 228 aa6.85□□□□□ -1.31
HDAC6-203ENST00000376619 PRR15LQ9BU68 103 aa6.84□□□□□ -1.31
HDAC6-203ENST00000376619 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
HDAC6-203ENST00000376619 TRAV22A0A0B4J277 110 aa6.83□□□□□ -1.32
HDAC6-203ENST00000376619 A6NED7 52 aa6.83□□□□□ -1.32
HDAC6-203ENST00000376619 SPAG11AQ6PDA7 123 aa6.83□□□□□ -1.32
HDAC6-203ENST00000376619 KRTAP4-16G5E9R7 235 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-203ENST00000376619 KLKP1Q107X0 134 aa6.82□□□□□ -1.32
HDAC6-203ENST00000376619 TYMSOSQ8TAI1 123 aa6.82□□□□□ -1.32
HDAC6-203ENST00000376619 OCR1Q9BZK8 76 aa6.82□□□□□ -1.32
HDAC6-203ENST00000376619 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
HDAC6-203ENST00000376619 C9orf92A6NGG3 77 aa6.79□□□□□ -1.32
HDAC6-203ENST00000376619 IGLV8-61A0A075B6I0 122 aa6.78□□□□□ -1.32
HDAC6-203ENST00000376619 C8orf17Q9NRJ1 99 aa6.78□□□□□ -1.32
HDAC6-203ENST00000376619 OXTP01178 125 aa6.77□□□□□ -1.33
HDAC6-203ENST00000376619 LINC00313P59037 77 aa6.76□□□□□ -1.33
HDAC6-203ENST00000376619 Q96NJ1 140 aa6.76□□□□□ -1.33
HDAC6-203ENST00000376619 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-203ENST00000376619 A8MUN3 132 aa6.76□□□□□ -1.33
HDAC6-203ENST00000376619 LCE6AA0A183 80 aa6.75□□□□□ -1.33
HDAC6-203ENST00000376619 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
HDAC6-203ENST00000376619 MRPL34Q9BQ48 92 aaKnown RBP6.74□□□□□ -1.33
HDAC6-203ENST00000376619 A0A1B0GW54 56 aa6.74□□□□□ -1.33
HDAC6-203ENST00000376619 LINC00336Q6ZUF6 198 aa6.74□□□□□ -1.33
HDAC6-203ENST00000376619 A0A1B0GVX0 72 aa6.73□□□□□ -1.33
HDAC6-203ENST00000376619 RPS28P62857 69 aaKnown RBP6.73□□□□□ -1.33
HDAC6-203ENST00000376619 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
HDAC6-203ENST00000376619 PRR26Q8N8Z3 221 aa6.73□□□□□ -1.33
HDAC6-203ENST00000376619 A0A087X002 238 aa6.71□□□□□ -1.34
HDAC6-203ENST00000376619 Q6ZRN7 208 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-203ENST00000376619 NOTCH2NLQ7Z3S9 236 aa6.71□□□□□ -1.34
HDAC6-203ENST00000376619 V9GYY9 64 aa6.7□□□□□ -1.34
HDAC6-203ENST00000376619 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
HDAC6-203ENST00000376619 PMAIP1Q13794 54 aa6.67□□□□□ -1.34
HDAC6-203ENST00000376619 COA5Q86WW8 74 aa6.66□□□□□ -1.34
HDAC6-203ENST00000376619 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
HDAC6-203ENST00000376619 C7orf65Q6ZTY9 151 aa6.65□□□□□ -1.34
HDAC6-203ENST00000376619 LIMD2Q9BT23 127 aa6.65□□□□□ -1.34
HDAC6-203ENST00000376619 TP53AIP1Q9HCN2 124 aa6.65□□□□□ -1.34
HDAC6-203ENST00000376619 MMP24-AS1A0A0U1RRL7 71 aa6.65□□□□□ -1.35
HDAC6-203ENST00000376619 Q6ZR54 194 aa6.64□□□□□ -1.35
HDAC6-203ENST00000376619 Q8N9P0 234 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-203ENST00000376619 Q8N1X5 172 aa6.64□□□□□ -1.35
HDAC6-203ENST00000376619 ANK2Q01484 3957 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms