RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
PDPN-202ENST00000376057 CIRBP-AS1Q8TBR5 109 aa6.83□□□□□ -1.32
PDPN-202ENST00000376057 FAM30AQ9NZY2 134 aa6.83□□□□□ -1.32
PDPN-202ENST00000376057 SMIM29Q86T20 159 aa6.82□□□□□ -1.32
PDPN-202ENST00000376057 ST20-AS1Q8NBB2 130 aa6.82□□□□□ -1.32
PDPN-202ENST00000376057 ZNF861PO60384 105 aa6.81□□□□□ -1.32
PDPN-202ENST00000376057 LINC00483Q53H64 154 aa6.81□□□□□ -1.32
PDPN-202ENST00000376057 GAGE2AQ6NT46 116 aa6.81□□□□□ -1.32
PDPN-202ENST00000376057 ZNF706Q9Y5V0 76 aaPredicted RBP6.81□□□□□ -1.32
PDPN-202ENST00000376057 C9orf153Q5TBE3 101 aa6.8□□□□□ -1.32
PDPN-202ENST00000376057 SCXQ7RTU7 201 aa6.8□□□□□ -1.32
PDPN-202ENST00000376057 DEFB105AQ8NG35 78 aa6.8□□□□□ -1.32
PDPN-202ENST00000376057 HIGD2AQ9BW72 106 aa6.8□□□□□ -1.32
PDPN-202ENST00000376057 RYR2Q92736 4967 aa6.8□□□□□ -1.32
PDPN-202ENST00000376057 IGLV7-43P04211 117 aa6.78□□□□□ -1.32
PDPN-202ENST00000376057 C1orf137Q5JT78 98 aa6.78□□□□□ -1.32
PDPN-202ENST00000376057 RPL37AP61513 92 aaKnown RBP6.77□□□□□ -1.32
PDPN-202ENST00000376057 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.32
PDPN-202ENST00000376057 LINC00643Q86TS7 51 aa6.77□□□□□ -1.32
PDPN-202ENST00000376057 SPRR4Q96PI1 79 aa6.77□□□□□ -1.33
PDPN-202ENST00000376057 Q6JHZ5 121 aa6.77□□□□□ -1.33
PDPN-202ENST00000376057 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
PDPN-202ENST00000376057 F8WEM9 126 aa6.76□□□□□ -1.33
PDPN-202ENST00000376057 HRCT1Q6UXD1 115 aa6.75□□□□□ -1.33
PDPN-202ENST00000376057 LINC00846Q9NV44 126 aa6.75□□□□□ -1.33
PDPN-202ENST00000376057 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
PDPN-202ENST00000376057 SEC61GP60059 68 aa6.73□□□□□ -1.33
PDPN-202ENST00000376057 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
PDPN-202ENST00000376057 UQCRQO14949 82 aa6.73□□□□□ -1.33
PDPN-202ENST00000376057 ATP5EP2Q5VTU8 51 aa6.73□□□□□ -1.33
PDPN-202ENST00000376057 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
PDPN-202ENST00000376057 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
PDPN-202ENST00000376057 Q8NBF4 154 aa6.72□□□□□ -1.33
PDPN-202ENST00000376057 TRBV7-7A0A0K0K1E9 115 aa6.72□□□□□ -1.33
PDPN-202ENST00000376057 CRYGAP11844 174 aa6.71□□□□□ -1.34
PDPN-202ENST00000376057 UBL5Q9BZL1 73 aa6.71□□□□□ -1.34
PDPN-202ENST00000376057 A0A1W2PNM2 257 aa6.7□□□□□ -1.34
PDPN-202ENST00000376057 IGFL1Q6UW32 110 aa6.7□□□□□ -1.34
PDPN-202ENST00000376057 Q5XG85 94 aa6.69□□□□□ -1.34
PDPN-202ENST00000376057 PRO0628Q9UI54 55 aa6.68□□□□□ -1.34
PDPN-202ENST00000376057 FAM229BQ4G0N7 80 aa6.68□□□□□ -1.34
PDPN-202ENST00000376057 KMT2CQ8NEZ4 4911 aaKnown RBP6.68□□□□□ -1.34
PDPN-202ENST00000376057 CXCL6P80162 114 aa6.67□□□□□ -1.34
PDPN-202ENST00000376057 Q6ZVQ6 151 aa6.67□□□□□ -1.34
PDPN-202ENST00000376057 DYNC1H1Q14204 4646 aaKnown RBP6.67□□□□□ -1.34
PDPN-202ENST00000376057 OXTP01178 125 aa6.66□□□□□ -1.34
PDPN-202ENST00000376057 LRP1BQ9NZR2 4599 aa6.66□□□□□ -1.34
PDPN-202ENST00000376057 COX7CP15954 63 aa6.65□□□□□ -1.34
PDPN-202ENST00000376057 PKHD1P08F94 4074 aa6.65□□□□□ -1.34
PDPN-202ENST00000376057 SPINK6Q6UWN8 80 aa6.64□□□□□ -1.35
PDPN-202ENST00000376057 V9GYY9 64 aa6.64□□□□□ -1.35
PDPN-202ENST00000376057 TMEM258P61165 79 aa6.63□□□□□ -1.35
PDPN-202ENST00000376057 SSBP3-AS1Q7Z2R9 100 aa6.63□□□□□ -1.35
PDPN-202ENST00000376057 CD164Q04900 197 aa6.63□□□□□ -1.35
PDPN-202ENST00000376057 NREPQ16612 68 aa6.63□□□□□ -1.35
PDPN-202ENST00000376057 KRTAP10-4P60372 401 aaPredicted RBP6.61□□□□□ -1.35
PDPN-202ENST00000376057 CDK2AP2O75956 126 aa6.61□□□□□ -1.35
PDPN-202ENST00000376057 HAMPP81172 84 aa6.61□□□□□ -1.35
PDPN-202ENST00000376057 CYSTM1Q9H1C7 97 aa6.6□□□□□ -1.35
PDPN-202ENST00000376057 KRTAP1-4P0C5Y4 121 aa6.6□□□□□ -1.35
PDPN-202ENST00000376057 VPS13BQ7Z7G8 4022 aa6.59□□□□□ -1.35
PDPN-202ENST00000376057 APOBP04114 4563 aaKnown RBP6.59□□□□□ -1.35
PDPN-202ENST00000376057 IGLV9-49A0A0B4J1Y8 123 aa6.58□□□□□ -1.36
PDPN-202ENST00000376057 HIST1H4AP62805 103 aaKnown RBP6.58□□□□□ -1.36
PDPN-202ENST00000376057 MOBPQ13875 183 aa6.58□□□□□ -1.36
PDPN-202ENST00000376057 IGKV3D-7A0A0C4DH55 119 aa6.57□□□□□ -1.36
PDPN-202ENST00000376057 FAM236DA0A1B0GTK5 79 aa6.57□□□□□ -1.36
PDPN-202ENST00000376057 FAM236CP0DP71 79 aa6.57□□□□□ -1.36
PDPN-202ENST00000376057 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
PDPN-202ENST00000376057 SRRM2Q9UQ35 2752 aaKnown RBP6.57□□□□□ -1.36
PDPN-202ENST00000376057 ATOX1O00244 68 aa6.56□□□□□ -1.36
PDPN-202ENST00000376057 A0A087WSZ3 146 aa6.55□□□□□ -1.36
PDPN-202ENST00000376057 A0A0G2JQZ4 141 aa6.55□□□□□ -1.36
PDPN-202ENST00000376057 BPY2O14599 106 aa6.55□□□□□ -1.36
PDPN-202ENST00000376057 C1orf195Q5TG92 126 aa6.55□□□□□ -1.36
PDPN-202ENST00000376057 ANAPC11Q9NYG5 84 aa6.55□□□□□ -1.36
PDPN-202ENST00000376057 ASB16-AS1Q495Z4 193 aa6.55□□□□□ -1.36
PDPN-202ENST00000376057 RYR3Q15413 4870 aa6.55□□□□□ -1.36
PDPN-202ENST00000376057 LINC00472Q9H8W2 130 aa6.54□□□□□ -1.36
PDPN-202ENST00000376057 KRTAP13-2Q52LG2 175 aa6.54□□□□□ -1.36
PDPN-202ENST00000376057 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
PDPN-202ENST00000376057 A0A087X002 238 aa6.53□□□□□ -1.36
PDPN-202ENST00000376057 IGKV4-1P06312 121 aa6.51□□□□□ -1.37
PDPN-202ENST00000376057 SMR3BP02814 79 aaPredicted RBP6.51□□□□□ -1.37
PDPN-202ENST00000376057 DSCR10P59022 87 aa6.51□□□□□ -1.37
PDPN-202ENST00000376057 FAM229AH3BQW9 127 aa6.5□□□□□ -1.37
PDPN-202ENST00000376057 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
PDPN-202ENST00000376057 Q96NJ1 140 aa6.5□□□□□ -1.37
PDPN-202ENST00000376057 A0A0U1RQV1 116 aa6.49□□□□□ -1.37
PDPN-202ENST00000376057 SERP2Q8N6R1 65 aa6.49□□□□□ -1.37
PDPN-202ENST00000376057 A0A087WVE0 104 aa6.47□□□□□ -1.37
PDPN-202ENST00000376057 A8MWP4 228 aa6.47□□□□□ -1.37
PDPN-202ENST00000376057 SPAG11AQ6PDA7 123 aa6.46□□□□□ -1.37
PDPN-202ENST00000376057 TYMSOSQ8TAI1 123 aa6.45□□□□□ -1.38
PDPN-202ENST00000376057 BRK1Q8WUW1 75 aa6.45□□□□□ -1.38
PDPN-202ENST00000376057 J3QL48 77 aa6.45□□□□□ -1.38
PDPN-202ENST00000376057 SPINK1P00995 79 aa6.45□□□□□ -1.38
PDPN-202ENST00000376057 PRR15Q8IV56 129 aa6.44□□□□□ -1.38
PDPN-202ENST00000376057 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
PDPN-202ENST00000376057 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms