RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 CASC2Q6XLA1 102 aa7.48□□□□□ -1.21
PACSIN1-202ENST00000374043 C9orf163Q8N9P6 203 aa7.48□□□□□ -1.21
PACSIN1-202ENST00000374043 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
PACSIN1-202ENST00000374043 RETNLBQ9BQ08 111 aa7.47□□□□□ -1.21
PACSIN1-202ENST00000374043 PCOTHQ58A44 107 aa7.46□□□□□ -1.22
PACSIN1-202ENST00000374043 TGP01266 2768 aa7.45□□□□□ -1.22
PACSIN1-202ENST00000374043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.45□□□□□ -1.22
PACSIN1-202ENST00000374043 A0A087WTM6 91 aa7.44□□□□□ -1.22
PACSIN1-202ENST00000374043 C5orf47Q569G3 176 aa7.44□□□□□ -1.22
PACSIN1-202ENST00000374043 BCE1O60756 84 aa7.44□□□□□ -1.22
PACSIN1-202ENST00000374043 PLA2G2DQ9UNK4 145 aa7.44□□□□□ -1.22
PACSIN1-202ENST00000374043 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
PACSIN1-202ENST00000374043 BRK1Q8WUW1 75 aa7.42□□□□□ -1.22
PACSIN1-202ENST00000374043 NDUFC1O43677 76 aa7.42□□□□□ -1.22
PACSIN1-202ENST00000374043 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
PACSIN1-202ENST00000374043 ZNF706Q9Y5V0 76 aaPredicted RBP7.42□□□□□ -1.22
PACSIN1-202ENST00000374043 IGLV5-48A0A075B6I7 105 aa7.41□□□□□ -1.22
PACSIN1-202ENST00000374043 PANO1I0J062 215 aa7.41□□□□□ -1.22
PACSIN1-202ENST00000374043 C4orf26Q17RF5 130 aa7.41□□□□□ -1.22
PACSIN1-202ENST00000374043 H0Y9P7 68 aa7.4□□□□□ -1.22
PACSIN1-202ENST00000374043 KRTAP7-1Q8IUC3 87 aa7.4□□□□□ -1.23
PACSIN1-202ENST00000374043 PSORS1C2Q9UIG4 136 aa7.39□□□□□ -1.23
PACSIN1-202ENST00000374043 SERP1Q9Y6X1 66 aa7.38□□□□□ -1.23
PACSIN1-202ENST00000374043 IGLV5-37A0A075B6J1 123 aa7.38□□□□□ -1.23
PACSIN1-202ENST00000374043 H7BZZ5 65 aa7.38□□□□□ -1.23
PACSIN1-202ENST00000374043 A0A0U1RQV1 116 aa7.37□□□□□ -1.23
PACSIN1-202ENST00000374043 SPRR1AP35321 89 aa7.37□□□□□ -1.23
PACSIN1-202ENST00000374043 KRTAP11-1Q8IUC1 163 aa7.37□□□□□ -1.23
PACSIN1-202ENST00000374043 TNP2Q05952 138 aa7.36□□□□□ -1.23
PACSIN1-202ENST00000374043 DSCR10P59022 87 aa7.35□□□□□ -1.23
PACSIN1-202ENST00000374043 CSMD3Q7Z407 3707 aa7.35□□□□□ -1.23
PACSIN1-202ENST00000374043 PSPHP1O15172 72 aa7.34□□□□□ -1.23
PACSIN1-202ENST00000374043 C1orf64Q8NEQ6 169 aa7.34□□□□□ -1.23
PACSIN1-202ENST00000374043 SMIM26A0A096LP01 95 aa7.34□□□□□ -1.24
PACSIN1-202ENST00000374043 hDV103S1A0JD37 113 aa7.34□□□□□ -1.24
PACSIN1-202ENST00000374043 SRRM2Q9UQ35 2752 aaKnown RBP7.34□□□□□ -1.24
PACSIN1-202ENST00000374043 KRTAP4-16G5E9R7 235 aaPredicted RBP7.32□□□□□ -1.24
PACSIN1-202ENST00000374043 SPACA4Q8TDM5 124 aa7.32□□□□□ -1.24
PACSIN1-202ENST00000374043 KLKP1Q107X0 134 aa7.31□□□□□ -1.24
PACSIN1-202ENST00000374043 A0A1B0GW54 56 aa7.29□□□□□ -1.24
PACSIN1-202ENST00000374043 A8MWP4 228 aa7.29□□□□□ -1.24
PACSIN1-202ENST00000374043 CHKB-CPT1BH3BT56 60 aa7.29□□□□□ -1.24
PACSIN1-202ENST00000374043 ZNF861PO60384 105 aa7.29□□□□□ -1.24
PACSIN1-202ENST00000374043 ATP5EP56381 51 aaPredicted RBP7.28□□□□□ -1.24
PACSIN1-202ENST00000374043 PRR15Q8IV56 129 aa7.28□□□□□ -1.24
PACSIN1-202ENST00000374043 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
PACSIN1-202ENST00000374043 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
PACSIN1-202ENST00000374043 SMR3BP02814 79 aaPredicted RBP7.28□□□□□ -1.24
PACSIN1-202ENST00000374043 WWC2-AS2Q96NR7 200 aa7.28□□□□□ -1.24
PACSIN1-202ENST00000374043 RPS28P62857 69 aaKnown RBP7.27□□□□□ -1.25
PACSIN1-202ENST00000374043 TRAV22A0A0B4J277 110 aa7.24□□□□□ -1.25
PACSIN1-202ENST00000374043 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
PACSIN1-202ENST00000374043 IGLV7-43P04211 117 aa7.22□□□□□ -1.25
PACSIN1-202ENST00000374043 OXTP01178 125 aa7.22□□□□□ -1.25
PACSIN1-202ENST00000374043 COL7A1Q02388 2944 aa7.2□□□□□ -1.26
PACSIN1-202ENST00000374043 IGKV2D-30A0A075B6S6 120 aa7.2□□□□□ -1.26
PACSIN1-202ENST00000374043 IGKV2-30P06310 120 aa7.2□□□□□ -1.26
PACSIN1-202ENST00000374043 KRTAP10-2P60368 255 aa7.2□□□□□ -1.26
PACSIN1-202ENST00000374043 C8orf17Q9NRJ1 99 aa7.2□□□□□ -1.26
PACSIN1-202ENST00000374043 PLA2G1BP04054 148 aaKnown RBP7.19□□□□□ -1.26
PACSIN1-202ENST00000374043 PRR15LQ9BU68 103 aa7.19□□□□□ -1.26
PACSIN1-202ENST00000374043 Q6ZRN7 208 aaPredicted RBP7.17□□□□□ -1.26
PACSIN1-202ENST00000374043 TYMSOSQ8TAI1 123 aa7.16□□□□□ -1.26
PACSIN1-202ENST00000374043 A0A1B0GVX0 72 aa7.16□□□□□ -1.26
PACSIN1-202ENST00000374043 SPINK1P00995 79 aa7.16□□□□□ -1.26
PACSIN1-202ENST00000374043 A6NED7 52 aa7.15□□□□□ -1.26
PACSIN1-202ENST00000374043 MRPL34Q9BQ48 92 aaKnown RBP7.15□□□□□ -1.26
PACSIN1-202ENST00000374043 FAM229BQ4G0N7 80 aa7.14□□□□□ -1.27
PACSIN1-202ENST00000374043 SPAG11AQ6PDA7 123 aa7.14□□□□□ -1.27
PACSIN1-202ENST00000374043 FBN3Q75N90 2809 aa7.13□□□□□ -1.27
PACSIN1-202ENST00000374043 LINC00313P59037 77 aa7.13□□□□□ -1.27
PACSIN1-202ENST00000374043 DMBT1Q9UGM3 2413 aaPredicted RBP7.13□□□□□ -1.27
PACSIN1-202ENST00000374043 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
PACSIN1-202ENST00000374043 LINC00336Q6ZUF6 198 aa7.12□□□□□ -1.27
PACSIN1-202ENST00000374043 PLAC8Q9NZF1 115 aa7.12□□□□□ -1.27
PACSIN1-202ENST00000374043 A8MUN3 132 aa7.11□□□□□ -1.27
PACSIN1-202ENST00000374043 TP53AIP1Q9HCN2 124 aa7.11□□□□□ -1.27
PACSIN1-202ENST00000374043 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
PACSIN1-202ENST00000374043 SPRR1BP22528 89 aa7.09□□□□□ -1.27
PACSIN1-202ENST00000374043 KRTAP10-1P60331 282 aa7.09□□□□□ -1.27
PACSIN1-202ENST00000374043 Q6ZR54 194 aa7.09□□□□□ -1.27
PACSIN1-202ENST00000374043 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
PACSIN1-202ENST00000374043 Q96NJ1 140 aa7.08□□□□□ -1.28
PACSIN1-202ENST00000374043 FLG2Q5D862 2391 aaPredicted RBP7.07□□□□□ -1.28
PACSIN1-202ENST00000374043 A0A087X002 238 aa7.06□□□□□ -1.28
PACSIN1-202ENST00000374043 FP248Q71RG6 208 aaPredicted RBP7.06□□□□□ -1.28
PACSIN1-202ENST00000374043 SSBP3-AS1Q7Z2R9 100 aa7.06□□□□□ -1.28
PACSIN1-202ENST00000374043 NOTCH2NLQ7Z3S9 236 aa7.06□□□□□ -1.28
PACSIN1-202ENST00000374043 COA5Q86WW8 74 aa7.06□□□□□ -1.28
PACSIN1-202ENST00000374043 LIMD2Q9BT23 127 aa7.06□□□□□ -1.28
PACSIN1-202ENST00000374043 Q5XG85 94 aa7.06□□□□□ -1.28
PACSIN1-202ENST00000374043 C9orf92A6NGG3 77 aa7.05□□□□□ -1.28
PACSIN1-202ENST00000374043 V9GYY9 64 aa7.05□□□□□ -1.28
PACSIN1-202ENST00000374043 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
PACSIN1-202ENST00000374043 H3BPC8 53 aa7.03□□□□□ -1.28
PACSIN1-202ENST00000374043 MEGF8Q7Z7M0 2845 aa7.02□□□□□ -1.29
PACSIN1-202ENST00000374043 PRO0628Q9UI54 55 aa7□□□□□ -1.29
PACSIN1-202ENST00000374043 PMAIP1Q13794 54 aa6.99□□□□□ -1.29
PACSIN1-202ENST00000374043 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
PACSIN1-202ENST00000374043 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms