RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 DEFB116Q30KQ4 102 aa12.16□□□□□ -0.46
GTF3C5-202ENST00000372097 NDUFB1O75438 58 aa12.15□□□□□ -0.47
GTF3C5-202ENST00000372097 PRR15Q8IV56 129 aa12.13□□□□□ -0.47
GTF3C5-202ENST00000372097 WFDC13Q8IUB5 93 aa12.13□□□□□ -0.47
GTF3C5-202ENST00000372097 LINC00588Q9Y4M8 146 aa12.13□□□□□ -0.47
GTF3C5-202ENST00000372097 TRAV22A0A0B4J277 110 aa12.12□□□□□ -0.47
GTF3C5-202ENST00000372097 IGLV8-61A0A075B6I0 122 aa12.11□□□□□ -0.47
GTF3C5-202ENST00000372097 A0A087WSZ3 146 aa12.11□□□□□ -0.47
GTF3C5-202ENST00000372097 PSPHP1O15172 72 aa12.11□□□□□ -0.47
GTF3C5-202ENST00000372097 DNAH1Q9P2D7 4330 aa12.11□□□□□ -0.47
GTF3C5-202ENST00000372097 MP68P56378 58 aa12.1□□□□□ -0.47
GTF3C5-202ENST00000372097 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
GTF3C5-202ENST00000372097 V9GYY9 64 aa12.09□□□□□ -0.47
GTF3C5-202ENST00000372097 MGAM2Q2M2H8 2515 aa12.07□□□□□ -0.48
GTF3C5-202ENST00000372097 PRLHP81277 87 aa12.07□□□□□ -0.48
GTF3C5-202ENST00000372097 RPL37AP61513 92 aaKnown RBP12.06□□□□□ -0.48
GTF3C5-202ENST00000372097 LINC00208Q96KT6 92 aa12.06□□□□□ -0.48
GTF3C5-202ENST00000372097 HUWE1Q7Z6Z7 4374 aaKnown RBP12.04□□□□□ -0.48
GTF3C5-202ENST00000372097 K7EIL1 84 aa12.04□□□□□ -0.48
GTF3C5-202ENST00000372097 B9D2Q9BPU9 175 aa12.04□□□□□ -0.48
GTF3C5-202ENST00000372097 A8MUN3 132 aa12□□□□□ -0.49
GTF3C5-202ENST00000372097 SPANXA2-OT1Q8N9U9 137 aa12□□□□□ -0.49
GTF3C5-202ENST00000372097 A0A096LNI7 61 aa11.99□□□□□ -0.49
GTF3C5-202ENST00000372097 CASC2Q6XLA1 102 aa11.99□□□□□ -0.49
GTF3C5-202ENST00000372097 H0Y9P7 68 aa11.99□□□□□ -0.49
GTF3C5-202ENST00000372097 H3BPC8 53 aa11.98□□□□□ -0.49
GTF3C5-202ENST00000372097 UBE2AP49459 152 aa11.98□□□□□ -0.49
GTF3C5-202ENST00000372097 CNBPP62633 177 aaKnown RBP11.98□□□□□ -0.49
GTF3C5-202ENST00000372097 C16orf90A8MZG2 172 aa11.97□□□□□ -0.49
GTF3C5-202ENST00000372097 IGKV2-24A0A0C4DH68 120 aa11.97□□□□□ -0.49
GTF3C5-202ENST00000372097 STAB2Q8WWQ8 2551 aa11.96□□□□□ -0.49
GTF3C5-202ENST00000372097 COL7A1Q02388 2944 aa11.95□□□□□ -0.5
GTF3C5-202ENST00000372097 LYSTQ99698 3801 aa11.95□□□□□ -0.5
GTF3C5-202ENST00000372097 Q5VV11 94 aa11.95□□□□□ -0.5
GTF3C5-202ENST00000372097 LINC00472Q9H8W2 130 aa11.95□□□□□ -0.5
GTF3C5-202ENST00000372097 A8MWP4 228 aa11.94□□□□□ -0.5
GTF3C5-202ENST00000372097 PMAIP1Q13794 54 aa11.94□□□□□ -0.5
GTF3C5-202ENST00000372097 SPRR1BP22528 89 aa11.92□□□□□ -0.5
GTF3C5-202ENST00000372097 SEC61GP60059 68 aa11.92□□□□□ -0.5
GTF3C5-202ENST00000372097 Q8N9P0 234 aaPredicted RBP11.91□□□□□ -0.5
GTF3C5-202ENST00000372097 C9orf163Q8N9P6 203 aa11.91□□□□□ -0.5
GTF3C5-202ENST00000372097 KRTAP11-1Q8IUC1 163 aa11.9□□□□□ -0.5
GTF3C5-202ENST00000372097 A8MU10 97 aa11.88□□□□□ -0.51
GTF3C5-202ENST00000372097 LIMD2Q9BT23 127 aa11.87□□□□□ -0.51
GTF3C5-202ENST00000372097 H0Y9J4 135 aa11.87□□□□□ -0.51
GTF3C5-202ENST00000372097 DNAH10Q8IVF4 4471 aa11.86□□□□□ -0.51
GTF3C5-202ENST00000372097 SRRM2Q9UQ35 2752 aaKnown RBP11.86□□□□□ -0.51
GTF3C5-202ENST00000372097 PHF5AQ7RTV0 110 aaKnown RBP11.85□□□□□ -0.51
GTF3C5-202ENST00000372097 KRTAP1-5Q9BYS1 174 aa11.85□□□□□ -0.51
GTF3C5-202ENST00000372097 TENM2Q9NT68 2774 aa11.84□□□□□ -0.51
GTF3C5-202ENST00000372097 MMP24-AS1A0A0U1RRL7 71 aa11.83□□□□□ -0.52
GTF3C5-202ENST00000372097 CHKB-CPT1BH3BT56 60 aa11.81□□□□□ -0.52
GTF3C5-202ENST00000372097 CHTF8P0CG12 524 aa11.81□□□□□ -0.52
GTF3C5-202ENST00000372097 PRR15LQ9BU68 103 aa11.8□□□□□ -0.52
GTF3C5-202ENST00000372097 DNAH9Q9NYC9 4486 aa11.8□□□□□ -0.52
GTF3C5-202ENST00000372097 IGLV7-46A0A075B6I9 117 aa11.79□□□□□ -0.52
GTF3C5-202ENST00000372097 COA5Q86WW8 74 aa11.78□□□□□ -0.52
GTF3C5-202ENST00000372097 UBE2DNLQ8IWF7 75 aa11.75□□□□□ -0.53
GTF3C5-202ENST00000372097 CSMD3Q7Z407 3707 aa11.75□□□□□ -0.53
GTF3C5-202ENST00000372097 LOC101927531A0A1B0GV80 90 aa11.74□□□□□ -0.53
GTF3C5-202ENST00000372097 ASB16-AS1Q495Z4 193 aa11.74□□□□□ -0.53
GTF3C5-202ENST00000372097 DNAH7Q8WXX0 4024 aa11.73□□□□□ -0.53
GTF3C5-202ENST00000372097 Q75L30 129 aa11.73□□□□□ -0.53
GTF3C5-202ENST00000372097 MDFIQ99750 246 aa11.72□□□□□ -0.53
GTF3C5-202ENST00000372097 APLNQ9ULZ1 77 aa11.72□□□□□ -0.53
GTF3C5-202ENST00000372097 Q96NJ1 140 aa11.71□□□□□ -0.53
GTF3C5-202ENST00000372097 PCOTHQ58A44 107 aa11.69□□□□□ -0.54
GTF3C5-202ENST00000372097 LCA10Q71F78 164 aa11.69□□□□□ -0.54
GTF3C5-202ENST00000372097 KRTAP13-1Q8IUC0 172 aa11.69□□□□□ -0.54
GTF3C5-202ENST00000372097 CD164Q04900 197 aa11.69□□□□□ -0.54
GTF3C5-202ENST00000372097 C14orf177Q52M58 125 aa11.69□□□□□ -0.54
GTF3C5-202ENST00000372097 TP53AIP1Q9HCN2 124 aa11.69□□□□□ -0.54
GTF3C5-202ENST00000372097 MOBPQ13875 183 aa11.66□□□□□ -0.54
GTF3C5-202ENST00000372097 Q6ZR54 194 aa11.66□□□□□ -0.54
GTF3C5-202ENST00000372097 A6NED7 52 aa11.64□□□□□ -0.55
GTF3C5-202ENST00000372097 ATP11AUNQ6ZP68 121 aa11.64□□□□□ -0.55
GTF3C5-202ENST00000372097 C8orf17Q9NRJ1 99 aa11.64□□□□□ -0.55
GTF3C5-202ENST00000372097 PLECQ15149 4684 aaKnown RBP11.63□□□□□ -0.55
GTF3C5-202ENST00000372097 PANO1I0J062 215 aa11.62□□□□□ -0.55
GTF3C5-202ENST00000372097 SPTSSBQ8NFR3 76 aa11.62□□□□□ -0.55
GTF3C5-202ENST00000372097 IGLV9-49A0A0B4J1Y8 123 aa11.61□□□□□ -0.55
GTF3C5-202ENST00000372097 DYNC2H1Q8NCM8 4307 aaKnown RBP11.61□□□□□ -0.55
GTF3C5-202ENST00000372097 PLAC8Q9NZF1 115 aa11.6□□□□□ -0.55
GTF3C5-202ENST00000372097 LINC01558Q9Y6Z2 57 aa11.6□□□□□ -0.55
GTF3C5-202ENST00000372097 SPAG11AQ6PDA7 123 aa11.58□□□□□ -0.56
GTF3C5-202ENST00000372097 KTN1-AS1Q86SY8 53 aa11.58□□□□□ -0.56
GTF3C5-202ENST00000372097 CDC42SE1Q9NRR8 79 aa11.57□□□□□ -0.56
GTF3C5-202ENST00000372097 A0A1B0GVX0 72 aa11.56□□□□□ -0.56
GTF3C5-202ENST00000372097 IGHV6-1A0A0B4J1U7 121 aa11.55□□□□□ -0.56
GTF3C5-202ENST00000372097 NDUFS5O43920 106 aa11.55□□□□□ -0.56
GTF3C5-202ENST00000372097 LINC00483Q53H64 154 aa11.55□□□□□ -0.56
GTF3C5-202ENST00000372097 NBDYA0A0U1RRE5 68 aa11.54□□□□□ -0.56
GTF3C5-202ENST00000372097 HRES1P13985 223 aa11.54□□□□□ -0.56
GTF3C5-202ENST00000372097 A6NN06 94 aa11.53□□□□□ -0.56
GTF3C5-202ENST00000372097 MRPL34Q9BQ48 92 aaKnown RBP11.51□□□□□ -0.57
GTF3C5-202ENST00000372097 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
GTF3C5-202ENST00000372097 A0A087X002 238 aa11.48□□□□□ -0.57
GTF3C5-202ENST00000372097 NOTCH2NLQ7Z3S9 236 aa11.48□□□□□ -0.57
GTF3C5-202ENST00000372097 STARD9Q9P2P6 4700 aa11.48□□□□□ -0.57
GTF3C5-202ENST00000372097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms