RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ANGP03950 147 aaKnown RBP4.55□□□□□ -1.68
CSDE1-204ENST00000369530 TRBV6-8A0A0A6YYG3 113 aa4.54□□□□□ -1.68
CSDE1-204ENST00000369530 C16orf90A8MZG2 172 aa4.54□□□□□ -1.68
CSDE1-204ENST00000369530 KRTAP1-5Q9BYS1 174 aa4.54□□□□□ -1.68
CSDE1-204ENST00000369530 A0A087X002 238 aa4.54□□□□□ -1.68
CSDE1-204ENST00000369530 IGKV4-1P06312 121 aa4.54□□□□□ -1.68
CSDE1-204ENST00000369530 C7orf65Q6ZTY9 151 aa4.54□□□□□ -1.68
CSDE1-204ENST00000369530 LCA10Q71F78 164 aa4.54□□□□□ -1.68
CSDE1-204ENST00000369530 ELOF1P60002 83 aaKnown RBP4.53□□□□□ -1.68
CSDE1-204ENST00000369530 IGLV4-60A0A075B6I1 120 aa4.53□□□□□ -1.68
CSDE1-204ENST00000369530 SLPIP03973 132 aa4.53□□□□□ -1.68
CSDE1-204ENST00000369530 LINC00158P58513 81 aa4.53□□□□□ -1.68
CSDE1-204ENST00000369530 Q75L30 129 aa4.53□□□□□ -1.68
CSDE1-204ENST00000369530 LOC101927531A0A1B0GV80 90 aa4.53□□□□□ -1.68
CSDE1-204ENST00000369530 CDC42SE2Q9NRR3 84 aa4.52□□□□□ -1.69
CSDE1-204ENST00000369530 LINC00269Q8N2A0 174 aa4.52□□□□□ -1.69
CSDE1-204ENST00000369530 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
CSDE1-204ENST00000369530 LIMD2Q9BT23 127 aa4.51□□□□□ -1.69
CSDE1-204ENST00000369530 COX7B2Q8TF08 81 aa4.51□□□□□ -1.69
CSDE1-204ENST00000369530 M0R2N4 97 aa4.51□□□□□ -1.69
CSDE1-204ENST00000369530 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
CSDE1-204ENST00000369530 Q9BRP9 147 aa4.51□□□□□ -1.69
CSDE1-204ENST00000369530 KLK12Q9UKR0 248 aa4.5□□□□□ -1.69
CSDE1-204ENST00000369530 ASB16-AS1Q495Z4 193 aa4.5□□□□□ -1.69
CSDE1-204ENST00000369530 A0A1B0GW54 56 aa4.49□□□□□ -1.69
CSDE1-204ENST00000369530 NUPR2A6NF83 97 aa4.49□□□□□ -1.69
CSDE1-204ENST00000369530 HIGD2AQ9BW72 106 aa4.49□□□□□ -1.69
CSDE1-204ENST00000369530 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
CSDE1-204ENST00000369530 A8MUN3 132 aa4.48□□□□□ -1.69
CSDE1-204ENST00000369530 HAMPP81172 84 aa4.48□□□□□ -1.69
CSDE1-204ENST00000369530 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
CSDE1-204ENST00000369530 PLAC8Q9NZF1 115 aa4.48□□□□□ -1.69
CSDE1-204ENST00000369530 A8MU10 97 aa4.48□□□□□ -1.69
CSDE1-204ENST00000369530 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-204ENST00000369530 SPANXA2-OT1Q8N9U9 137 aa4.48□□□□□ -1.69
CSDE1-204ENST00000369530 LINC00959A0A1B0GUT2 108 aa4.48□□□□□ -1.69
CSDE1-204ENST00000369530 REG3AQ06141 175 aa4.47□□□□□ -1.69
CSDE1-204ENST00000369530 Q6ZSA8 131 aa4.47□□□□□ -1.69
CSDE1-204ENST00000369530 DEFB131BA0A096LNP1 70 aa4.47□□□□□ -1.69
CSDE1-204ENST00000369530 PSPHP1O15172 72 aa4.47□□□□□ -1.69
CSDE1-204ENST00000369530 CHCHD10Q8WYQ3 142 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-204ENST00000369530 KRTAP4-5Q9BYR2 181 aa4.46□□□□□ -1.7
CSDE1-204ENST00000369530 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
CSDE1-204ENST00000369530 NDUFB1O75438 58 aa4.45□□□□□ -1.7
CSDE1-204ENST00000369530 COX17Q14061 63 aa4.45□□□□□ -1.7
CSDE1-204ENST00000369530 LCE2DQ5TA82 110 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-204ENST00000369530 IGHV3OR16-9A0A0B4J2B5 98 aa4.45□□□□□ -1.7
CSDE1-204ENST00000369530 LRCOL1A6NCL2 159 aa4.45□□□□□ -1.7
CSDE1-204ENST00000369530 HCG22E2RYF7 251 aa4.45□□□□□ -1.7
CSDE1-204ENST00000369530 PRR26Q8N8Z3 221 aa4.45□□□□□ -1.7
CSDE1-204ENST00000369530 COX7BP24311 80 aa4.45□□□□□ -1.7
CSDE1-204ENST00000369530 IGKV2D-24A0A075B6R9 120 aa4.44□□□□□ -1.7
CSDE1-204ENST00000369530 LELP1Q5T871 98 aa4.43□□□□□ -1.7
CSDE1-204ENST00000369530 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-204ENST00000369530 SPAG11BQ08648 103 aa4.43□□□□□ -1.7
CSDE1-204ENST00000369530 HIGD2BQ4VC39 106 aa4.43□□□□□ -1.7
CSDE1-204ENST00000369530 WFDC10BQ8IUB3 73 aa4.43□□□□□ -1.7
CSDE1-204ENST00000369530 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-204ENST00000369530 Q8IZM0 81 aa4.42□□□□□ -1.7
CSDE1-204ENST00000369530 A0A1B0GUV1 79 aa4.42□□□□□ -1.7
CSDE1-204ENST00000369530 IGLV6-57P01721 117 aa4.42□□□□□ -1.7
CSDE1-204ENST00000369530 NKAPP1Q8N9T2 125 aa4.42□□□□□ -1.7
CSDE1-204ENST00000369530 DNAH10OSP0CZ25 163 aa4.41□□□□□ -1.7
CSDE1-204ENST00000369530 KCNQ1DNQ9H478 68 aa4.41□□□□□ -1.7
CSDE1-204ENST00000369530 MOBPQ13875 183 aa4.41□□□□□ -1.7
CSDE1-204ENST00000369530 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.4□□□□□ -1.7
CSDE1-204ENST00000369530 ETDCA0A1B0GVM5 59 aa4.4□□□□□ -1.7
CSDE1-204ENST00000369530 H3BPC8 53 aa4.4□□□□□ -1.7
CSDE1-204ENST00000369530 UBE2DNLQ8IWF7 75 aa4.4□□□□□ -1.7
CSDE1-204ENST00000369530 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
CSDE1-204ENST00000369530 PLA2G1BP04054 148 aaKnown RBP4.39□□□□□ -1.71
CSDE1-204ENST00000369530 CNBPP62633 177 aaKnown RBP4.39□□□□□ -1.71
CSDE1-204ENST00000369530 C6orf99Q4VX62 202 aa4.39□□□□□ -1.71
CSDE1-204ENST00000369530 UNQ6190/PRO20217Q6UXQ8 127 aa4.39□□□□□ -1.71
CSDE1-204ENST00000369530 CAMK2N2Q96S95 79 aa4.39□□□□□ -1.71
CSDE1-204ENST00000369530 CDK2AP2O75956 126 aa4.39□□□□□ -1.71
CSDE1-204ENST00000369530 PRR3P79522 188 aaKnown RBP4.39□□□□□ -1.71
CSDE1-204ENST00000369530 XAGE1AQ9HD64 81 aa4.39□□□□□ -1.71
CSDE1-204ENST00000369530 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
CSDE1-204ENST00000369530 LPAP08519 4548 aa4.38□□□□□ -1.71
CSDE1-204ENST00000369530 LINC01554Q52M75 96 aa4.37□□□□□ -1.71
CSDE1-204ENST00000369530 SMIM29Q86T20 159 aa4.37□□□□□ -1.71
CSDE1-204ENST00000369530 SCXQ7RTU7 201 aa4.37□□□□□ -1.71
CSDE1-204ENST00000369530 Q8NDZ9 215 aa4.36□□□□□ -1.71
CSDE1-204ENST00000369530 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
CSDE1-204ENST00000369530 C10orf25Q5T742 122 aa4.36□□□□□ -1.71
CSDE1-204ENST00000369530 PRR34Q9NV39 138 aa4.36□□□□□ -1.71
CSDE1-204ENST00000369530 J3QL48 77 aa4.36□□□□□ -1.71
CSDE1-204ENST00000369530 Q6ZQY7 126 aa4.36□□□□□ -1.71
CSDE1-204ENST00000369530 C9orf163Q8N9P6 203 aa4.35□□□□□ -1.71
CSDE1-204ENST00000369530 KRTAP3-3Q9BYR6 98 aa4.35□□□□□ -1.71
CSDE1-204ENST00000369530 KRTAP3-2Q9BYR7 98 aa4.35□□□□□ -1.71
CSDE1-204ENST00000369530 SRRM2Q9UQ35 2752 aaKnown RBP4.35□□□□□ -1.71
CSDE1-204ENST00000369530 IGLV5-48A0A075B6I7 105 aa4.35□□□□□ -1.71
CSDE1-204ENST00000369530 LINC00313P59037 77 aa4.35□□□□□ -1.71
CSDE1-204ENST00000369530 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
CSDE1-204ENST00000369530 NBDYA0A0U1RRE5 68 aa4.34□□□□□ -1.71
CSDE1-204ENST00000369530 KRTAP10-2P60368 255 aa4.34□□□□□ -1.71
CSDE1-204ENST00000369530 PLA2G2DQ9UNK4 145 aa4.34□□□□□ -1.71
CSDE1-204ENST00000369530 Q8N9L7 120 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms