RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 HRCT1Q6UXD1 115 aa8.62□□□□□ -1.03
SHC1-202ENST00000368445 IGFL1Q6UW32 110 aa8.61□□□□□ -1.03
SHC1-202ENST00000368445 SNURFQ9Y675 71 aa8.61□□□□□ -1.03
SHC1-202ENST00000368445 SMIM29Q86T20 159 aa8.6□□□□□ -1.03
SHC1-202ENST00000368445 BCE1O60756 84 aa8.59□□□□□ -1.04
SHC1-202ENST00000368445 TNP2Q05952 138 aa8.58□□□□□ -1.04
SHC1-202ENST00000368445 ANAPC11Q9NYG5 84 aa8.57□□□□□ -1.04
SHC1-202ENST00000368445 STARD9Q9P2P6 4700 aa8.56□□□□□ -1.04
SHC1-202ENST00000368445 SPACA4Q8TDM5 124 aa8.56□□□□□ -1.04
SHC1-202ENST00000368445 CYSTM1Q9H1C7 97 aa8.56□□□□□ -1.04
SHC1-202ENST00000368445 WFDC13Q8IUB5 93 aa8.55□□□□□ -1.04
SHC1-202ENST00000368445 WWC2-AS2Q96NR7 200 aa8.55□□□□□ -1.04
SHC1-202ENST00000368445 PSORS1C2Q9UIG4 136 aa8.55□□□□□ -1.04
SHC1-202ENST00000368445 TRAV7A0A075B6U4 112 aa8.54□□□□□ -1.04
SHC1-202ENST00000368445 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
SHC1-202ENST00000368445 Q6ZR54 194 aa8.54□□□□□ -1.04
SHC1-202ENST00000368445 FAM30AQ9NZY2 134 aa8.54□□□□□ -1.04
SHC1-202ENST00000368445 IGKV4-1P06312 121 aa8.53□□□□□ -1.04
SHC1-202ENST00000368445 CRYGAP11844 174 aa8.53□□□□□ -1.04
SHC1-202ENST00000368445 K7EQZ3 153 aa8.52□□□□□ -1.05
SHC1-202ENST00000368445 H0Y9J4 135 aa8.52□□□□□ -1.05
SHC1-202ENST00000368445 SPRR4Q96PI1 79 aa8.5□□□□□ -1.05
SHC1-202ENST00000368445 KMT2AQ03164 3969 aa8.48□□□□□ -1.05
SHC1-202ENST00000368445 MOBPQ13875 183 aa8.48□□□□□ -1.05
SHC1-202ENST00000368445 DNAH1Q9P2D7 4330 aa8.47□□□□□ -1.05
SHC1-202ENST00000368445 KRTAP10-2P60368 255 aa8.47□□□□□ -1.05
SHC1-202ENST00000368445 A0A1B0GW54 56 aa8.46□□□□□ -1.05
SHC1-202ENST00000368445 DSCR10P59022 87 aa8.46□□□□□ -1.05
SHC1-202ENST00000368445 ZNF861PO60384 105 aa8.43□□□□□ -1.06
SHC1-202ENST00000368445 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
SHC1-202ENST00000368445 ZNF706Q9Y5V0 76 aaPredicted RBP8.43□□□□□ -1.06
SHC1-202ENST00000368445 TMEM254Q8TBM7 123 aa8.42□□□□□ -1.06
SHC1-202ENST00000368445 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
SHC1-202ENST00000368445 HCG22E2RYF7 251 aa8.42□□□□□ -1.06
SHC1-202ENST00000368445 C5orf47Q569G3 176 aa8.42□□□□□ -1.06
SHC1-202ENST00000368445 TMEM258P61165 79 aa8.41□□□□□ -1.06
SHC1-202ENST00000368445 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
SHC1-202ENST00000368445 CDK2AP2O75956 126 aa8.41□□□□□ -1.06
SHC1-202ENST00000368445 NDUFB1O75438 58 aa8.4□□□□□ -1.06
SHC1-202ENST00000368445 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
SHC1-202ENST00000368445 SPRR1BP22528 89 aa8.39□□□□□ -1.07
SHC1-202ENST00000368445 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
SHC1-202ENST00000368445 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
SHC1-202ENST00000368445 KRTAP13-1Q8IUC0 172 aa8.38□□□□□ -1.07
SHC1-202ENST00000368445 NDUFS5O43920 106 aa8.37□□□□□ -1.07
SHC1-202ENST00000368445 IGLV7-43P04211 117 aa8.37□□□□□ -1.07
SHC1-202ENST00000368445 CASC2Q6XLA1 102 aa8.36□□□□□ -1.07
SHC1-202ENST00000368445 J3KT08 172 aa8.36□□□□□ -1.07
SHC1-202ENST00000368445 VPS13DQ5THJ4 4388 aa8.36□□□□□ -1.07
SHC1-202ENST00000368445 OCR1Q9BZK8 76 aa8.35□□□□□ -1.07
SHC1-202ENST00000368445 IGHV6-1A0A0B4J1U7 121 aa8.35□□□□□ -1.07
SHC1-202ENST00000368445 PRR4Q16378 134 aa8.34□□□□□ -1.07
SHC1-202ENST00000368445 KRTAP10-1P60331 282 aa8.34□□□□□ -1.07
SHC1-202ENST00000368445 H7BZZ5 65 aa8.33□□□□□ -1.08
SHC1-202ENST00000368445 KLKP1Q107X0 134 aa8.32□□□□□ -1.08
SHC1-202ENST00000368445 DYNC2H1Q8NCM8 4307 aaKnown RBP8.31□□□□□ -1.08
SHC1-202ENST00000368445 A8MWP4 228 aa8.31□□□□□ -1.08
SHC1-202ENST00000368445 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
SHC1-202ENST00000368445 MP68P56378 58 aa8.31□□□□□ -1.08
SHC1-202ENST00000368445 LINC00208Q96KT6 92 aa8.3□□□□□ -1.08
SHC1-202ENST00000368445 SEC61GP60059 68 aa8.3□□□□□ -1.08
SHC1-202ENST00000368445 LINC00472Q9H8W2 130 aa8.29□□□□□ -1.08
SHC1-202ENST00000368445 NDUFC1O43677 76 aa8.27□□□□□ -1.09
SHC1-202ENST00000368445 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
SHC1-202ENST00000368445 SMR3BP02814 79 aaPredicted RBP8.26□□□□□ -1.09
SHC1-202ENST00000368445 hDV103S1A0JD37 113 aa8.25□□□□□ -1.09
SHC1-202ENST00000368445 LINC00483Q53H64 154 aa8.24□□□□□ -1.09
SHC1-202ENST00000368445 A0A0U1RQV1 116 aa8.23□□□□□ -1.09
SHC1-202ENST00000368445 H0Y9P7 68 aa8.23□□□□□ -1.09
SHC1-202ENST00000368445 HECTD4Q9Y4D8 3996 aa8.22□□□□□ -1.09
SHC1-202ENST00000368445 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
SHC1-202ENST00000368445 DNAH11Q96DT5 4516 aa8.21□□□□□ -1.1
SHC1-202ENST00000368445 KRTAP21-3Q3LHN1 58 aa8.2□□□□□ -1.1
SHC1-202ENST00000368445 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
SHC1-202ENST00000368445 DNAH6Q9C0G6 4158 aa8.19□□□□□ -1.1
SHC1-202ENST00000368445 A0A087X002 238 aa8.19□□□□□ -1.1
SHC1-202ENST00000368445 PLA2G1BP04054 148 aaKnown RBP8.19□□□□□ -1.1
SHC1-202ENST00000368445 OXTP01178 125 aa8.17□□□□□ -1.1
SHC1-202ENST00000368445 RPS28P62857 69 aaKnown RBP8.17□□□□□ -1.1
SHC1-202ENST00000368445 C8orf17Q9NRJ1 99 aa8.17□□□□□ -1.1
SHC1-202ENST00000368445 SERP1Q9Y6X1 66 aa8.17□□□□□ -1.1
SHC1-202ENST00000368445 MMP24-AS1A0A0U1RRL7 71 aa8.16□□□□□ -1.1
SHC1-202ENST00000368445 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
SHC1-202ENST00000368445 PCOTHQ58A44 107 aa8.16□□□□□ -1.1
SHC1-202ENST00000368445 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
SHC1-202ENST00000368445 SSBP3-AS1Q7Z2R9 100 aa8.15□□□□□ -1.1
SHC1-202ENST00000368445 MPLKIPQ8TAP9 179 aa8.15□□□□□ -1.1
SHC1-202ENST00000368445 KRTAP29-1A8MX34 341 aaPredicted RBP8.15□□□□□ -1.11
SHC1-202ENST00000368445 RETNLBQ9BQ08 111 aa8.15□□□□□ -1.11
SHC1-202ENST00000368445 NOTCH2NLQ7Z3S9 236 aa8.14□□□□□ -1.11
SHC1-202ENST00000368445 Q96NJ1 140 aa8.14□□□□□ -1.11
SHC1-202ENST00000368445 C4orf26Q17RF5 130 aa8.14□□□□□ -1.11
SHC1-202ENST00000368445 DNAH17Q9UFH2 4485 aa8.14□□□□□ -1.11
SHC1-202ENST00000368445 TRAV22A0A0B4J277 110 aa8.12□□□□□ -1.11
SHC1-202ENST00000368445 HYDINQ4G0P3 5121 aa8.12□□□□□ -1.11
SHC1-202ENST00000368445 TYMSOSQ8TAI1 123 aa8.11□□□□□ -1.11
SHC1-202ENST00000368445 ATP5EP56381 51 aaPredicted RBP8.1□□□□□ -1.11
SHC1-202ENST00000368445 Q6ZSA8 131 aa8.1□□□□□ -1.11
SHC1-202ENST00000368445 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.11
SHC1-202ENST00000368445 KRTAP13-2Q52LG2 175 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms