RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 A0A1W2PNM2 257 aa5.72□□□□□ -1.49
THBS3-201ENST00000368378 K7EQZ3 153 aa5.72□□□□□ -1.49
THBS3-201ENST00000368378 CXCL6P80162 114 aa5.72□□□□□ -1.49
THBS3-201ENST00000368378 NDUFC1O43677 76 aa5.72□□□□□ -1.49
THBS3-201ENST00000368378 A0A087WSZ3 146 aa5.71□□□□□ -1.5
THBS3-201ENST00000368378 LINC01556Q5JQF7 62 aa5.71□□□□□ -1.5
THBS3-201ENST00000368378 H3BNG1 76 aa5.7□□□□□ -1.5
THBS3-201ENST00000368378 H3BQ85 93 aa5.7□□□□□ -1.5
THBS3-201ENST00000368378 UBE2DNLQ8IWF7 75 aa5.7□□□□□ -1.5
THBS3-201ENST00000368378 CMYA5Q8N3K9 4069 aa5.7□□□□□ -1.5
THBS3-201ENST00000368378 Q6ZRX8 168 aa5.7□□□□□ -1.5
THBS3-201ENST00000368378 PRYO14603 147 aa5.69□□□□□ -1.5
THBS3-201ENST00000368378 KRTAP7-1Q8IUC3 87 aa5.68□□□□□ -1.5
THBS3-201ENST00000368378 K7EIL1 84 aa5.68□□□□□ -1.5
THBS3-201ENST00000368378 LINC00476Q8WZB0 136 aa5.67□□□□□ -1.5
THBS3-201ENST00000368378 KCNQ1DNQ9H478 68 aa5.67□□□□□ -1.5
THBS3-201ENST00000368378 NDUFS5O43920 106 aa5.67□□□□□ -1.5
THBS3-201ENST00000368378 LINC00313P59037 77 aa5.67□□□□□ -1.5
THBS3-201ENST00000368378 PHF5AQ7RTV0 110 aaKnown RBP5.67□□□□□ -1.5
THBS3-201ENST00000368378 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
THBS3-201ENST00000368378 IGLV1-50A0A075B6I6 118 aa5.66□□□□□ -1.5
THBS3-201ENST00000368378 PRKDCP78527 4128 aaKnown RBP5.66□□□□□ -1.5
THBS3-201ENST00000368378 REG3GQ6UW15 175 aa5.65□□□□□ -1.5
THBS3-201ENST00000368378 ZNF706Q9Y5V0 76 aaPredicted RBP5.65□□□□□ -1.5
THBS3-201ENST00000368378 DNAH10OSP0CZ25 163 aa5.65□□□□□ -1.5
THBS3-201ENST00000368378 LCA10Q71F78 164 aa5.65□□□□□ -1.5
THBS3-201ENST00000368378 H0Y9J4 135 aa5.65□□□□□ -1.51
THBS3-201ENST00000368378 KRTAP1-5Q9BYS1 174 aa5.65□□□□□ -1.51
THBS3-201ENST00000368378 UBE2AP49459 152 aa5.64□□□□□ -1.51
THBS3-201ENST00000368378 OCR1Q9BZK8 76 aa5.64□□□□□ -1.51
THBS3-201ENST00000368378 DHRS4-AS1Q9P1J3 65 aa5.64□□□□□ -1.51
THBS3-201ENST00000368378 IGLV9-49A0A0B4J1Y8 123 aa5.64□□□□□ -1.51
THBS3-201ENST00000368378 LINC00208Q96KT6 92 aa5.63□□□□□ -1.51
THBS3-201ENST00000368378 Q8NBF4 154 aa5.63□□□□□ -1.51
THBS3-201ENST00000368378 DSCR10P59022 87 aa5.63□□□□□ -1.51
THBS3-201ENST00000368378 IGFL1Q6UW32 110 aa5.62□□□□□ -1.51
THBS3-201ENST00000368378 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
THBS3-201ENST00000368378 ANAPC11Q9NYG5 84 aa5.62□□□□□ -1.51
THBS3-201ENST00000368378 TRAV22A0A0B4J277 110 aa5.61□□□□□ -1.51
THBS3-201ENST00000368378 IGLV5-48A0A075B6I7 105 aa5.61□□□□□ -1.51
THBS3-201ENST00000368378 MP68P56378 58 aa5.61□□□□□ -1.51
THBS3-201ENST00000368378 DNAH9Q9NYC9 4486 aa5.6□□□□□ -1.51
THBS3-201ENST00000368378 DNAH7Q8WXX0 4024 aa5.6□□□□□ -1.51
THBS3-201ENST00000368378 KRTAP4-16G5E9R7 235 aaPredicted RBP5.59□□□□□ -1.51
THBS3-201ENST00000368378 HCG22E2RYF7 251 aa5.59□□□□□ -1.51
THBS3-201ENST00000368378 TLX1NBP0CAT3 122 aa5.59□□□□□ -1.51
THBS3-201ENST00000368378 PCOTHQ58A44 107 aa5.59□□□□□ -1.51
THBS3-201ENST00000368378 hDV103S1A0JD37 113 aa5.59□□□□□ -1.52
THBS3-201ENST00000368378 C1orf64Q8NEQ6 169 aa5.58□□□□□ -1.52
THBS3-201ENST00000368378 HUWE1Q7Z6Z7 4374 aaKnown RBP5.58□□□□□ -1.52
THBS3-201ENST00000368378 Q1T7F1 81 aa5.57□□□□□ -1.52
THBS3-201ENST00000368378 C7orf65Q6ZTY9 151 aa5.57□□□□□ -1.52
THBS3-201ENST00000368378 PANO1I0J062 215 aa5.57□□□□□ -1.52
THBS3-201ENST00000368378 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
THBS3-201ENST00000368378 SPRR1AP35321 89 aa5.57□□□□□ -1.52
THBS3-201ENST00000368378 SPINK6Q6UWN8 80 aa5.57□□□□□ -1.52
THBS3-201ENST00000368378 PLA2G2DQ9UNK4 145 aa5.56□□□□□ -1.52
THBS3-201ENST00000368378 CHKB-CPT1BH3BT56 60 aa5.56□□□□□ -1.52
THBS3-201ENST00000368378 C16orf90A8MZG2 172 aa5.55□□□□□ -1.52
THBS3-201ENST00000368378 IGLV5-37A0A075B6J1 123 aa5.54□□□□□ -1.52
THBS3-201ENST00000368378 CASC2Q6XLA1 102 aa5.54□□□□□ -1.52
THBS3-201ENST00000368378 FRAS1Q86XX4 4008 aa5.53□□□□□ -1.52
THBS3-201ENST00000368378 A6NN06 94 aa5.53□□□□□ -1.52
THBS3-201ENST00000368378 H0Y9P7 68 aa5.52□□□□□ -1.53
THBS3-201ENST00000368378 RETNLBQ9BQ08 111 aa5.52□□□□□ -1.53
THBS3-201ENST00000368378 DNAH1Q9P2D7 4330 aa5.52□□□□□ -1.53
THBS3-201ENST00000368378 KRTAP21-3Q3LHN1 58 aa5.52□□□□□ -1.53
THBS3-201ENST00000368378 Q5VV11 94 aa5.52□□□□□ -1.53
THBS3-201ENST00000368378 SPRR4Q96PI1 79 aa5.52□□□□□ -1.53
THBS3-201ENST00000368378 DNAH3Q8TD57 4116 aa5.51□□□□□ -1.53
THBS3-201ENST00000368378 IGHV6-1A0A0B4J1U7 121 aa5.51□□□□□ -1.53
THBS3-201ENST00000368378 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
THBS3-201ENST00000368378 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
THBS3-201ENST00000368378 PLECQ15149 4684 aaKnown RBP5.5□□□□□ -1.53
THBS3-201ENST00000368378 ATP11AUNQ6ZP68 121 aa5.48□□□□□ -1.53
THBS3-201ENST00000368378 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
THBS3-201ENST00000368378 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
THBS3-201ENST00000368378 B9D2Q9BPU9 175 aa5.48□□□□□ -1.53
THBS3-201ENST00000368378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
THBS3-201ENST00000368378 Q75L30 129 aa5.48□□□□□ -1.53
THBS3-201ENST00000368378 A0A1B0GW54 56 aa5.47□□□□□ -1.53
THBS3-201ENST00000368378 A6NED7 52 aa5.47□□□□□ -1.53
THBS3-201ENST00000368378 MOBPQ13875 183 aa5.47□□□□□ -1.53
THBS3-201ENST00000368378 CNBPP62633 177 aaKnown RBP5.46□□□□□ -1.54
THBS3-201ENST00000368378 KMT2AQ03164 3969 aa5.44□□□□□ -1.54
THBS3-201ENST00000368378 LCE2DQ5TA82 110 aaPredicted RBP5.44□□□□□ -1.54
THBS3-201ENST00000368378 NDUFB1O75438 58 aa5.44□□□□□ -1.54
THBS3-201ENST00000368378 SPAG11AQ6PDA7 123 aa5.43□□□□□ -1.54
THBS3-201ENST00000368378 CDK2AP2O75956 126 aa5.43□□□□□ -1.54
THBS3-201ENST00000368378 CIRBP-AS1Q8TBR5 109 aa5.43□□□□□ -1.54
THBS3-201ENST00000368378 A0A087X002 238 aa5.42□□□□□ -1.54
THBS3-201ENST00000368378 LY6G6CO95867 125 aa5.42□□□□□ -1.54
THBS3-201ENST00000368378 NOTCH2NLQ7Z3S9 236 aa5.42□□□□□ -1.54
THBS3-201ENST00000368378 APLNQ9ULZ1 77 aa5.42□□□□□ -1.54
THBS3-201ENST00000368378 STARD9Q9P2P6 4700 aa5.41□□□□□ -1.54
THBS3-201ENST00000368378 A8MWP4 228 aa5.41□□□□□ -1.54
THBS3-201ENST00000368378 CYP4F30PQ9H0H9 118 aa5.41□□□□□ -1.54
THBS3-201ENST00000368378 NBDYA0A0U1RRE5 68 aa5.41□□□□□ -1.54
THBS3-201ENST00000368378 LCE6AA0A183 80 aa5.41□□□□□ -1.54
THBS3-201ENST00000368378 ZCCHC13Q8WW36 166 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms