RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 PKIAP61925 76 aa-1.19□□□□□ -2.6
ECHDC1-201ENST00000368287 KALRNO60229 2985 aa-1.19□□□□□ -2.6
ECHDC1-201ENST00000368287 LRRK2Q5S007 2527 aa-1.19□□□□□ -2.6
ECHDC1-201ENST00000368287 PLECQ15149 4684 aaKnown RBP-1.19□□□□□ -2.6
ECHDC1-201ENST00000368287 ZNF831Q5JPB2 1677 aa-1.2□□□□□ -2.6
ECHDC1-201ENST00000368287 DOT1LQ8TEK3 1739 aa-1.2□□□□□ -2.6
ECHDC1-201ENST00000368287 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.2□□□□□ -2.6
ECHDC1-201ENST00000368287 UTP20O75691 2785 aaKnown RBP-1.2□□□□□ -2.6
ECHDC1-201ENST00000368287 SMIM11AP58511 58 aa-1.2□□□□□ -2.6
ECHDC1-201ENST00000368287 RPL38P63173 70 aaKnown RBP-1.2□□□□□ -2.6
ECHDC1-201ENST00000368287 NBEAQ8NFP9 2946 aa-1.2□□□□□ -2.6
ECHDC1-201ENST00000368287 CEP162Q5TB80 1403 aa-1.21□□□□□ -2.6
ECHDC1-201ENST00000368287 USP9XQ93008 2570 aaPredicted RBP-1.21□□□□□ -2.6
ECHDC1-201ENST00000368287 TMEM131LA2VDJ0 1609 aa-1.21□□□□□ -2.6
ECHDC1-201ENST00000368287 USP32Q8NFA0 1604 aa-1.21□□□□□ -2.6
ECHDC1-201ENST00000368287 GCN1Q92616 2671 aaKnown RBP-1.21□□□□□ -2.6
ECHDC1-201ENST00000368287 RIF1Q5UIP0 2472 aaKnown RBP-1.22□□□□□ -2.6
ECHDC1-201ENST00000368287 S100A8P05109 93 aa-1.22□□□□□ -2.6
ECHDC1-201ENST00000368287 WDR87Q6ZQQ6 2873 aa-1.22□□□□□ -2.61
ECHDC1-201ENST00000368287 WFDC9Q8NEX5 89 aa-1.23□□□□□ -2.61
ECHDC1-201ENST00000368287 DNAH1Q9P2D7 4330 aa-1.24□□□□□ -2.61
ECHDC1-201ENST00000368287 NESP48681 1621 aa-1.24□□□□□ -2.61
ECHDC1-201ENST00000368287 A0A0C4DFX4 3053 aa-1.24□□□□□ -2.61
ECHDC1-201ENST00000368287 K7EP34 96 aa-1.24□□□□□ -2.61
ECHDC1-201ENST00000368287 CYB5AP00167 134 aa-1.24□□□□□ -2.61
ECHDC1-201ENST00000368287 NBEAL2Q6ZNJ1 2754 aa-1.24□□□□□ -2.61
ECHDC1-201ENST00000368287 RYR2Q92736 4967 aa-1.25□□□□□ -2.61
ECHDC1-201ENST00000368287 MYMXA0A1B0GTQ4 84 aa-1.25□□□□□ -2.61
ECHDC1-201ENST00000368287 S4R3F8 94 aa-1.25□□□□□ -2.61
ECHDC1-201ENST00000368287 CEP290O15078 2479 aa-1.25□□□□□ -2.61
ECHDC1-201ENST00000368287 H0YAA0 97 aa-1.26□□□□□ -2.61
ECHDC1-201ENST00000368287 DEFB1P60022 68 aa-1.26□□□□□ -2.61
ECHDC1-201ENST00000368287 ACACBO00763 2458 aa-1.26□□□□□ -2.61
ECHDC1-201ENST00000368287 NWD1Q149M9 1564 aa-1.26□□□□□ -2.61
ECHDC1-201ENST00000368287 DEFB110Q30KQ9 67 aa-1.27□□□□□ -2.61
ECHDC1-201ENST00000368287 PRO3102Q9H379 93 aa-1.27□□□□□ -2.61
ECHDC1-201ENST00000368287 MAP3K1Q13233 1512 aa-1.27□□□□□ -2.61
ECHDC1-201ENST00000368287 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.27□□□□□ -2.61
ECHDC1-201ENST00000368287 RNF213Q63HN8 5207 aa-1.27□□□□□ -2.61
ECHDC1-201ENST00000368287 CMYA5Q8N3K9 4069 aa-1.28□□□□□ -2.61
ECHDC1-201ENST00000368287 TRIOO75962 3097 aa-1.28□□□□□ -2.61
ECHDC1-201ENST00000368287 PLXNC1O60486 1568 aa-1.28□□□□□ -2.61
ECHDC1-201ENST00000368287 DNHD1Q96M86 4753 aa-1.28□□□□□ -2.61
ECHDC1-201ENST00000368287 LINC00158P58513 81 aa-1.29□□□□□ -2.62
ECHDC1-201ENST00000368287 KRTAP19-5Q3LI72 72 aa-1.3□□□□□ -2.62
ECHDC1-201ENST00000368287 RELNP78509 3460 aa-1.3□□□□□ -2.62
ECHDC1-201ENST00000368287 NCOA2Q15596 1464 aa-1.31□□□□□ -2.62
ECHDC1-201ENST00000368287 WIZO95785 1651 aa-1.31□□□□□ -2.62
ECHDC1-201ENST00000368287 C3orf79P0CE67 100 aa-1.31□□□□□ -2.62
ECHDC1-201ENST00000368287 PYY3Q5JQD4 70 aa-1.31□□□□□ -2.62
ECHDC1-201ENST00000368287 SACSQ9NZJ4 4579 aa-1.31□□□□□ -2.62
ECHDC1-201ENST00000368287 PRLHP81277 87 aa-1.32□□□□□ -2.62
ECHDC1-201ENST00000368287 S100A16Q96FQ6 103 aaKnown RBP-1.32□□□□□ -2.62
ECHDC1-201ENST00000368287 CEBPZOSA8MTT3 80 aa-1.33□□□□□ -2.62
ECHDC1-201ENST00000368287 SNRPFP62306 86 aaKnown RBP-1.33□□□□□ -2.62
ECHDC1-201ENST00000368287 MT1XP80297 61 aa-1.33□□□□□ -2.62
ECHDC1-201ENST00000368287 LINC00643Q86TS7 51 aa-1.33□□□□□ -2.62
ECHDC1-201ENST00000368287 COL12A1Q99715 3063 aa-1.33□□□□□ -2.62
ECHDC1-201ENST00000368287 PLIN4Q96Q06 1357 aa-1.34□□□□□ -2.62
ECHDC1-201ENST00000368287 ARFGEF2Q9Y6D5 1785 aa-1.34□□□□□ -2.62
ECHDC1-201ENST00000368287 DNAH7Q8WXX0 4024 aa-1.34□□□□□ -2.62
ECHDC1-201ENST00000368287 Q9H521 79 aa-1.34□□□□□ -2.62
ECHDC1-201ENST00000368287 RABAC1Q9UI14 185 aa-1.34□□□□□ -2.62
ECHDC1-201ENST00000368287 FRYQ5TBA9 3013 aa-1.34□□□□□ -2.62
ECHDC1-201ENST00000368287 PPLO60437 1756 aa-1.34□□□□□ -2.62
ECHDC1-201ENST00000368287 CCNB3Q8WWL7 1395 aa-1.34□□□□□ -2.62
ECHDC1-201ENST00000368287 DNAH8Q96JB1 4490 aa-1.35□□□□□ -2.63
ECHDC1-201ENST00000368287 KIF14Q15058 1648 aa-1.36□□□□□ -2.63
ECHDC1-201ENST00000368287 ACYP1P07311 99 aa-1.36□□□□□ -2.63
ECHDC1-201ENST00000368287 TLN2Q9Y4G6 2542 aa-1.36□□□□□ -2.63
ECHDC1-201ENST00000368287 C5orf42Q9H799 3197 aa-1.37□□□□□ -2.63
ECHDC1-201ENST00000368287 ABCC3O15438 1527 aa-1.38□□□□□ -2.63
ECHDC1-201ENST00000368287 RANBP2P49792 3224 aaKnown RBP-1.38□□□□□ -2.63
ECHDC1-201ENST00000368287 NDUFB1O75438 58 aa-1.38□□□□□ -2.63
ECHDC1-201ENST00000368287 V9GYS6 101 aa-1.38□□□□□ -2.63
ECHDC1-201ENST00000368287 DIP2BQ9P265 1576 aa-1.38□□□□□ -2.63
ECHDC1-201ENST00000368287 URB2Q14146 1524 aaKnown RBP-1.39□□□□□ -2.63
ECHDC1-201ENST00000368287 CELSR3Q9NYQ7 3312 aa-1.39□□□□□ -2.63
ECHDC1-201ENST00000368287 CHD7Q9P2D1 2997 aa-1.39□□□□□ -2.63
ECHDC1-201ENST00000368287 PIK3C2BO00750 1634 aa-1.39□□□□□ -2.63
ECHDC1-201ENST00000368287 DEPDC5O75140 1603 aa-1.39□□□□□ -2.63
ECHDC1-201ENST00000368287 DDX60LQ5H9U9 1706 aaKnown RBP-1.39□□□□□ -2.63
ECHDC1-201ENST00000368287 MT1HL1P0DM35 61 aa-1.39□□□□□ -2.63
ECHDC1-201ENST00000368287 LCE6AA0A183 80 aa-1.4□□□□□ -2.63
ECHDC1-201ENST00000368287 TDRG1Q3Y452 100 aa-1.4□□□□□ -2.63
ECHDC1-201ENST00000368287 TTC37Q6PGP7 1564 aa-1.4□□□□□ -2.63
ECHDC1-201ENST00000368287 DYNC1H1Q14204 4646 aaKnown RBP-1.4□□□□□ -2.63
ECHDC1-201ENST00000368287 MAP3K4Q9Y6R4 1608 aa-1.4□□□□□ -2.63
ECHDC1-201ENST00000368287 MAGI3Q5TCQ9 1506 aa-1.4□□□□□ -2.63
ECHDC1-201ENST00000368287 PLCH1Q4KWH8 1693 aa-1.41□□□□□ -2.63
ECHDC1-201ENST00000368287 IFI6P09912 130 aa-1.41□□□□□ -2.64
ECHDC1-201ENST00000368287 ITPR1Q14643 2758 aa-1.42□□□□□ -2.64
ECHDC1-201ENST00000368287 COL6A5A8TX70 2615 aa-1.42□□□□□ -2.64
ECHDC1-201ENST00000368287 CEP295Q9C0D2 2601 aa-1.42□□□□□ -2.64
ECHDC1-201ENST00000368287 MYO9AB2RTY4 2548 aa-1.42□□□□□ -2.64
ECHDC1-201ENST00000368287 SRCAPQ6ZRS2 3230 aa-1.42□□□□□ -2.64
ECHDC1-201ENST00000368287 PVALEFA0A1B0GWK0 134 aa-1.42□□□□□ -2.64
ECHDC1-201ENST00000368287 UMAD1C9J7I0 102 aa-1.42□□□□□ -2.64
ECHDC1-201ENST00000368287 SMR3BP02814 79 aaPredicted RBP-1.42□□□□□ -2.64
ECHDC1-201ENST00000368287 DEFB130BP0DP73 79 aa-1.42□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms