RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 UBE2DNLQ8IWF7 75 aa5.22□□□□□ -1.57
CD46-208ENST00000367042 TLX1NBP0CAT3 122 aa5.21□□□□□ -1.58
CD46-208ENST00000367042 KRTAP7-1Q8IUC3 87 aa5.21□□□□□ -1.58
CD46-208ENST00000367042 hDV103S1A0JD37 113 aa5.21□□□□□ -1.58
CD46-208ENST00000367042 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.58
CD46-208ENST00000367042 TNP2Q05952 138 aa5.21□□□□□ -1.58
CD46-208ENST00000367042 SPRR4Q96PI1 79 aa5.21□□□□□ -1.58
CD46-208ENST00000367042 A0A1B0GW54 56 aa5.2□□□□□ -1.58
CD46-208ENST00000367042 CHTF8P0CG12 524 aa5.2□□□□□ -1.58
CD46-208ENST00000367042 DNAH3Q8TD57 4116 aa5.2□□□□□ -1.58
CD46-208ENST00000367042 SPRR1AP35321 89 aa5.2□□□□□ -1.58
CD46-208ENST00000367042 CASC2Q6XLA1 102 aa5.19□□□□□ -1.58
CD46-208ENST00000367042 PLA2G2DQ9UNK4 145 aa5.19□□□□□ -1.58
CD46-208ENST00000367042 H0Y9P7 68 aa5.18□□□□□ -1.58
CD46-208ENST00000367042 PHF5AQ7RTV0 110 aaKnown RBP5.18□□□□□ -1.58
CD46-208ENST00000367042 NDUFB1O75438 58 aa5.18□□□□□ -1.58
CD46-208ENST00000367042 STAB2Q8WWQ8 2551 aa5.17□□□□□ -1.58
CD46-208ENST00000367042 V9GYY9 64 aa5.17□□□□□ -1.58
CD46-208ENST00000367042 IGLV5-37A0A075B6J1 123 aa5.17□□□□□ -1.58
CD46-208ENST00000367042 A8MUN3 132 aa5.17□□□□□ -1.58
CD46-208ENST00000367042 TRAV22A0A0B4J277 110 aa5.16□□□□□ -1.58
CD46-208ENST00000367042 KRTAP24-1Q3LI83 254 aa5.16□□□□□ -1.58
CD46-208ENST00000367042 B9D2Q9BPU9 175 aa5.16□□□□□ -1.58
CD46-208ENST00000367042 NDUFS5O43920 106 aa5.16□□□□□ -1.58
CD46-208ENST00000367042 IGLV9-49A0A0B4J1Y8 123 aa5.15□□□□□ -1.59
CD46-208ENST00000367042 TENM2Q9NT68 2774 aa5.15□□□□□ -1.59
CD46-208ENST00000367042 PCOTHQ58A44 107 aa5.15□□□□□ -1.59
CD46-208ENST00000367042 C16orf90A8MZG2 172 aa5.14□□□□□ -1.59
CD46-208ENST00000367042 CHKB-CPT1BH3BT56 60 aa5.13□□□□□ -1.59
CD46-208ENST00000367042 SPTSSBQ8NFR3 76 aa5.13□□□□□ -1.59
CD46-208ENST00000367042 ZCCHC13Q8WW36 166 aaKnown RBP5.13□□□□□ -1.59
CD46-208ENST00000367042 PRR15LQ9BU68 103 aa5.12□□□□□ -1.59
CD46-208ENST00000367042 COL7A1Q02388 2944 aa5.12□□□□□ -1.59
CD46-208ENST00000367042 LCE6AA0A183 80 aa5.12□□□□□ -1.59
CD46-208ENST00000367042 Q1T7F1 81 aa5.12□□□□□ -1.59
CD46-208ENST00000367042 KRTAP1-5Q9BYS1 174 aa5.12□□□□□ -1.59
CD46-208ENST00000367042 PRR15Q8IV56 129 aa5.11□□□□□ -1.59
CD46-208ENST00000367042 A8MWP4 228 aa5.1□□□□□ -1.59
CD46-208ENST00000367042 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
CD46-208ENST00000367042 CNBPP62633 177 aaKnown RBP5.1□□□□□ -1.59
CD46-208ENST00000367042 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
CD46-208ENST00000367042 CYP4F30PQ9H0H9 118 aa5.09□□□□□ -1.59
CD46-208ENST00000367042 CDK2AP2O75956 126 aa5.09□□□□□ -1.59
CD46-208ENST00000367042 A8MU10 97 aa5.08□□□□□ -1.6
CD46-208ENST00000367042 IGHV6-1A0A0B4J1U7 121 aa5.08□□□□□ -1.6
CD46-208ENST00000367042 A6NED7 52 aa5.08□□□□□ -1.6
CD46-208ENST00000367042 K7EIL1 84 aa5.07□□□□□ -1.6
CD46-208ENST00000367042 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
CD46-208ENST00000367042 SEC61GP60059 68 aa5.07□□□□□ -1.6
CD46-208ENST00000367042 C14orf177Q52M58 125 aa5.07□□□□□ -1.6
CD46-208ENST00000367042 SPINK6Q6UWN8 80 aa5.06□□□□□ -1.6
CD46-208ENST00000367042 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
CD46-208ENST00000367042 SPAG11AQ6PDA7 123 aa5.05□□□□□ -1.6
CD46-208ENST00000367042 COA5Q86WW8 74 aa5.05□□□□□ -1.6
CD46-208ENST00000367042 LYSTQ99698 3801 aa5.05□□□□□ -1.6
CD46-208ENST00000367042 LINC00472Q9H8W2 130 aa5.05□□□□□ -1.6
CD46-208ENST00000367042 IGLV8-61A0A075B6I0 122 aa5.04□□□□□ -1.6
CD46-208ENST00000367042 ANAPC11Q9NYG5 84 aa5.04□□□□□ -1.6
CD46-208ENST00000367042 Q5VV11 94 aa5.04□□□□□ -1.6
CD46-208ENST00000367042 LIMD2Q9BT23 127 aa5.04□□□□□ -1.6
CD46-208ENST00000367042 Q8N9P0 234 aaPredicted RBP5.03□□□□□ -1.6
CD46-208ENST00000367042 HUWE1Q7Z6Z7 4374 aaKnown RBP5.03□□□□□ -1.6
CD46-208ENST00000367042 H3BPC8 53 aa5.03□□□□□ -1.6
CD46-208ENST00000367042 MMP24-AS1A0A0U1RRL7 71 aa5.03□□□□□ -1.6
CD46-208ENST00000367042 PANO1I0J062 215 aa5.03□□□□□ -1.6
CD46-208ENST00000367042 MOBPQ13875 183 aa5.02□□□□□ -1.61
CD46-208ENST00000367042 SPANXA2-OT1Q8N9U9 137 aa5.02□□□□□ -1.61
CD46-208ENST00000367042 C9orf163Q8N9P6 203 aa5.01□□□□□ -1.61
CD46-208ENST00000367042 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
CD46-208ENST00000367042 DNAH1Q9P2D7 4330 aa4.99□□□□□ -1.61
CD46-208ENST00000367042 CD164Q04900 197 aa4.98□□□□□ -1.61
CD46-208ENST00000367042 MDFIQ99750 246 aa4.98□□□□□ -1.61
CD46-208ENST00000367042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.98□□□□□ -1.61
CD46-208ENST00000367042 SPRR1BP22528 89 aa4.98□□□□□ -1.61
CD46-208ENST00000367042 IGLV7-46A0A075B6I9 117 aa4.97□□□□□ -1.61
CD46-208ENST00000367042 NBDYA0A0U1RRE5 68 aa4.97□□□□□ -1.61
CD46-208ENST00000367042 RETNLBQ9BQ08 111 aa4.97□□□□□ -1.61
CD46-208ENST00000367042 TP53AIP1Q9HCN2 124 aa4.97□□□□□ -1.61
CD46-208ENST00000367042 APLNQ9ULZ1 77 aa4.97□□□□□ -1.61
CD46-208ENST00000367042 CIRBP-AS1Q8TBR5 109 aa4.97□□□□□ -1.61
CD46-208ENST00000367042 DNAH9Q9NYC9 4486 aa4.96□□□□□ -1.62
CD46-208ENST00000367042 A0A1B0GVX0 72 aa4.95□□□□□ -1.62
CD46-208ENST00000367042 MRPL34Q9BQ48 92 aaKnown RBP4.95□□□□□ -1.62
CD46-208ENST00000367042 LOC101927531A0A1B0GV80 90 aa4.95□□□□□ -1.62
CD46-208ENST00000367042 A0A087X002 238 aa4.94□□□□□ -1.62
CD46-208ENST00000367042 NOTCH2NLQ7Z3S9 236 aa4.94□□□□□ -1.62
CD46-208ENST00000367042 PSORS1C2Q9UIG4 136 aa4.94□□□□□ -1.62
CD46-208ENST00000367042 ZNF706Q9Y5V0 76 aaPredicted RBP4.94□□□□□ -1.62
CD46-208ENST00000367042 LCA10Q71F78 164 aa4.94□□□□□ -1.62
CD46-208ENST00000367042 DYNC2H1Q8NCM8 4307 aaKnown RBP4.93□□□□□ -1.62
CD46-208ENST00000367042 PRR26Q8N8Z3 221 aa4.93□□□□□ -1.62
CD46-208ENST00000367042 Q96NJ1 140 aa4.92□□□□□ -1.62
CD46-208ENST00000367042 Q75L30 129 aa4.92□□□□□ -1.62
CD46-208ENST00000367042 HRES1P13985 223 aa4.92□□□□□ -1.62
CD46-208ENST00000367042 RTL8CO15255 209 aa4.91□□□□□ -1.62
CD46-208ENST00000367042 SPACA4Q8TDM5 124 aa4.91□□□□□ -1.62
CD46-208ENST00000367042 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.62
CD46-208ENST00000367042 TGP01266 2768 aa4.9□□□□□ -1.62
CD46-208ENST00000367042 SPINK7P58062 85 aa4.9□□□□□ -1.63
CD46-208ENST00000367042 KRTAP13-1Q8IUC0 172 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms