RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 FBN2P35556 2912 aa7.48□□□□□ -1.21
RD3-201ENST00000367002 ACYP2P14621 99 aa7.47□□□□□ -1.21
RD3-201ENST00000367002 A0A1W2PNM2 257 aa7.47□□□□□ -1.21
RD3-201ENST00000367002 K7EIL1 84 aa7.47□□□□□ -1.21
RD3-201ENST00000367002 NIPBLQ6KC79 2804 aaeCLIP7.47□□□□□ -1.21
RD3-201ENST00000367002 TLX1NBP0CAT3 122 aa7.46□□□□□ -1.22
RD3-201ENST00000367002 CASC10Q5T4H9 136 aa7.46□□□□□ -1.22
RD3-201ENST00000367002 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
RD3-201ENST00000367002 A8MUN3 132 aa7.45□□□□□ -1.22
RD3-201ENST00000367002 A0A1B0GU69 56 aa7.45□□□□□ -1.22
RD3-201ENST00000367002 PLA2G2DQ9UNK4 145 aa7.43□□□□□ -1.22
RD3-201ENST00000367002 LINC00313P59037 77 aa7.43□□□□□ -1.22
RD3-201ENST00000367002 APCP25054 2843 aa7.43□□□□□ -1.22
RD3-201ENST00000367002 LINC00336Q6ZUF6 198 aa7.43□□□□□ -1.22
RD3-201ENST00000367002 C9orf163Q8N9P6 203 aa7.42□□□□□ -1.22
RD3-201ENST00000367002 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
RD3-201ENST00000367002 MRPL34Q9BQ48 92 aaKnown RBP7.42□□□□□ -1.22
RD3-201ENST00000367002 HIVEP1P15822 2718 aa7.41□□□□□ -1.22
RD3-201ENST00000367002 IGLV5-48A0A075B6I7 105 aa7.41□□□□□ -1.22
RD3-201ENST00000367002 STAB2Q8WWQ8 2551 aa7.39□□□□□ -1.23
RD3-201ENST00000367002 LOC101927531A0A1B0GV80 90 aa7.39□□□□□ -1.23
RD3-201ENST00000367002 COA5Q86WW8 74 aa7.39□□□□□ -1.23
RD3-201ENST00000367002 C8orf17Q9NRJ1 99 aa7.38□□□□□ -1.23
RD3-201ENST00000367002 HRNRQ86YZ3 2850 aaPredicted RBP7.37□□□□□ -1.23
RD3-201ENST00000367002 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
RD3-201ENST00000367002 FAM229AH3BQW9 127 aa7.36□□□□□ -1.23
RD3-201ENST00000367002 Q8NDZ9 215 aa7.36□□□□□ -1.23
RD3-201ENST00000367002 ZNF861PO60384 105 aa7.35□□□□□ -1.23
RD3-201ENST00000367002 ANAPC11Q9NYG5 84 aa7.35□□□□□ -1.23
RD3-201ENST00000367002 ATP11AUNQ6ZP68 121 aa7.35□□□□□ -1.23
RD3-201ENST00000367002 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.23
RD3-201ENST00000367002 OCR1Q9BZK8 76 aa7.34□□□□□ -1.23
RD3-201ENST00000367002 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
RD3-201ENST00000367002 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
RD3-201ENST00000367002 KMT2BQ9UMN6 2715 aaPredicted RBP7.33□□□□□ -1.24
RD3-201ENST00000367002 A0A087WTM6 91 aa7.32□□□□□ -1.24
RD3-201ENST00000367002 CNBPP62633 177 aaKnown RBP7.32□□□□□ -1.24
RD3-201ENST00000367002 CYP4F30PQ9H0H9 118 aa7.32□□□□□ -1.24
RD3-201ENST00000367002 SMG1Q96Q15 3661 aaKnown RBP7.31□□□□□ -1.24
RD3-201ENST00000367002 IGLV5-37A0A075B6J1 123 aa7.31□□□□□ -1.24
RD3-201ENST00000367002 PLA2G1BP04054 148 aaKnown RBP7.31□□□□□ -1.24
RD3-201ENST00000367002 Q96NJ1 140 aa7.31□□□□□ -1.24
RD3-201ENST00000367002 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
RD3-201ENST00000367002 DSCR10P59022 87 aa7.29□□□□□ -1.24
RD3-201ENST00000367002 PSORS1C2Q9UIG4 136 aa7.29□□□□□ -1.24
RD3-201ENST00000367002 CUBNO60494 3623 aa7.29□□□□□ -1.24
RD3-201ENST00000367002 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
RD3-201ENST00000367002 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
RD3-201ENST00000367002 APLNQ9ULZ1 77 aa7.27□□□□□ -1.25
RD3-201ENST00000367002 CELSR1Q9NYQ6 3014 aa7.26□□□□□ -1.25
RD3-201ENST00000367002 MXRA5Q9NR99 2828 aa7.26□□□□□ -1.25
RD3-201ENST00000367002 WWC2-AS2Q96NR7 200 aa7.25□□□□□ -1.25
RD3-201ENST00000367002 FLG2Q5D862 2391 aaPredicted RBP7.25□□□□□ -1.25
RD3-201ENST00000367002 TENM4Q6N022 2769 aa7.25□□□□□ -1.25
RD3-201ENST00000367002 WIPF1O43516 503 aa7.24□□□□□ -1.25
RD3-201ENST00000367002 SPANXA2-OT1Q8N9U9 137 aa7.24□□□□□ -1.25
RD3-201ENST00000367002 UQCR11O14957 56 aa7.23□□□□□ -1.25
RD3-201ENST00000367002 IGLV7-43P04211 117 aa7.22□□□□□ -1.25
RD3-201ENST00000367002 SPRR1AP35321 89 aa7.2□□□□□ -1.26
RD3-201ENST00000367002 SVEP1Q4LDE5 3571 aa7.18□□□□□ -1.26
RD3-201ENST00000367002 CSMD1Q96PZ7 3565 aa7.18□□□□□ -1.26
RD3-201ENST00000367002 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
RD3-201ENST00000367002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
RD3-201ENST00000367002 LINC00304Q8N9R0 145 aa7.15□□□□□ -1.26
RD3-201ENST00000367002 MIR22HGQ0VDD5 57 aa7.14□□□□□ -1.27
RD3-201ENST00000367002 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
RD3-201ENST00000367002 KRTAP26-1Q6PEX3 210 aa7.14□□□□□ -1.27
RD3-201ENST00000367002 Q5XG85 94 aa7.13□□□□□ -1.27
RD3-201ENST00000367002 FP248Q71RG6 208 aaPredicted RBP7.13□□□□□ -1.27
RD3-201ENST00000367002 DMBT1Q9UGM3 2413 aaPredicted RBP7.13□□□□□ -1.27
RD3-201ENST00000367002 Q1T7F1 81 aa7.13□□□□□ -1.27
RD3-201ENST00000367002 C9orf92A6NGG3 77 aa7.11□□□□□ -1.27
RD3-201ENST00000367002 FAM229BQ4G0N7 80 aa7.1□□□□□ -1.27
RD3-201ENST00000367002 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
RD3-201ENST00000367002 TNP2Q05952 138 aa7.1□□□□□ -1.27
RD3-201ENST00000367002 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
RD3-201ENST00000367002 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
RD3-201ENST00000367002 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
RD3-201ENST00000367002 OXTP01178 125 aa7.07□□□□□ -1.28
RD3-201ENST00000367002 CD164Q04900 197 aa7.07□□□□□ -1.28
RD3-201ENST00000367002 Q8N1X5 172 aa7.07□□□□□ -1.28
RD3-201ENST00000367002 CDC42SE1Q9NRR8 79 aa7.07□□□□□ -1.28
RD3-201ENST00000367002 FBN1P35555 2871 aaKnown RBP7.06□□□□□ -1.28
RD3-201ENST00000367002 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
RD3-201ENST00000367002 SPRR1BP22528 89 aa7.05□□□□□ -1.28
RD3-201ENST00000367002 Q8N9P0 234 aaPredicted RBP7.05□□□□□ -1.28
RD3-201ENST00000367002 ZFHX3Q15911 3703 aa7.04□□□□□ -1.28
RD3-201ENST00000367002 CSMD2Q7Z408 3487 aa7.03□□□□□ -1.28
RD3-201ENST00000367002 HRES1P13985 223 aa7.02□□□□□ -1.29
RD3-201ENST00000367002 PKD1L1Q8TDX9 2849 aa7□□□□□ -1.29
RD3-201ENST00000367002 KRTAP4-16G5E9R7 235 aaPredicted RBP6.99□□□□□ -1.29
RD3-201ENST00000367002 LCA10Q71F78 164 aa6.99□□□□□ -1.29
RD3-201ENST00000367002 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
RD3-201ENST00000367002 TENM1Q9UKZ4 2725 aa6.99□□□□□ -1.29
RD3-201ENST00000367002 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
RD3-201ENST00000367002 Q75L30 129 aa6.97□□□□□ -1.29
RD3-201ENST00000367002 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
RD3-201ENST00000367002 LINC01558Q9Y6Z2 57 aa6.96□□□□□ -1.3
RD3-201ENST00000367002 SPENQ96T58 3664 aaKnown RBP6.95□□□□□ -1.3
RD3-201ENST00000367002 Q5VV11 94 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms