RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 A0A1W2PNM2 257 aa3.43□□□□□ -1.86
CDC42BPA-204ENST00000366767 Q8NDZ9 215 aa3.43□□□□□ -1.86
CDC42BPA-204ENST00000366767 IGLV7-46A0A075B6I9 117 aa3.43□□□□□ -1.86
CDC42BPA-204ENST00000366767 ASPMQ8IZT6 3477 aa3.43□□□□□ -1.86
CDC42BPA-204ENST00000366767 ASH1LQ9NR48 2969 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-204ENST00000366767 LRBAP50851 2863 aa3.43□□□□□ -1.86
CDC42BPA-204ENST00000366767 TNRC18O15417 2968 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-204ENST00000366767 MAP1AP78559 2803 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-204ENST00000366767 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
CDC42BPA-204ENST00000366767 CHTF8P0CG12 524 aa3.42□□□□□ -1.86
CDC42BPA-204ENST00000366767 LAMA5O15230 3695 aa3.41□□□□□ -1.86
CDC42BPA-204ENST00000366767 KMT2BQ9UMN6 2715 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-204ENST00000366767 CENPEQ02224 2701 aa3.41□□□□□ -1.86
CDC42BPA-204ENST00000366767 DMDP11532 3685 aa3.41□□□□□ -1.86
CDC42BPA-204ENST00000366767 CHD6Q8TD26 2715 aa3.41□□□□□ -1.86
CDC42BPA-204ENST00000366767 DMAC1Q96GE9 116 aa3.41□□□□□ -1.86
CDC42BPA-204ENST00000366767 A0A0G2JQZ4 141 aa3.41□□□□□ -1.86
CDC42BPA-204ENST00000366767 A0A1W2PNN7 141 aa3.41□□□□□ -1.86
CDC42BPA-204ENST00000366767 PRR26Q8N8Z3 221 aa3.4□□□□□ -1.86
CDC42BPA-204ENST00000366767 FASNP49327 2511 aaKnown RBP3.4□□□□□ -1.86
CDC42BPA-204ENST00000366767 A0A0D9SG42 100 aa3.4□□□□□ -1.87
CDC42BPA-204ENST00000366767 DCHS1Q96JQ0 3298 aa3.4□□□□□ -1.87
CDC42BPA-204ENST00000366767 RTL8CO15255 209 aa3.39□□□□□ -1.87
CDC42BPA-204ENST00000366767 CFAP46Q8IYW2 2715 aa3.39□□□□□ -1.87
CDC42BPA-204ENST00000366767 TACC2O95359 2948 aa3.39□□□□□ -1.87
CDC42BPA-204ENST00000366767 SPINK7P58062 85 aa3.39□□□□□ -1.87
CDC42BPA-204ENST00000366767 SPRR1BP22528 89 aa3.39□□□□□ -1.87
CDC42BPA-204ENST00000366767 FLNAP21333 2647 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-204ENST00000366767 CASC10Q5T4H9 136 aa3.38□□□□□ -1.87
CDC42BPA-204ENST00000366767 BAHCC1Q9P281 2608 aa3.38□□□□□ -1.87
CDC42BPA-204ENST00000366767 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
CDC42BPA-204ENST00000366767 ITPR3Q14573 2671 aa3.37□□□□□ -1.87
CDC42BPA-204ENST00000366767 TYMSOSQ8TAI1 123 aa3.37□□□□□ -1.87
CDC42BPA-204ENST00000366767 ZNF861PO60384 105 aa3.37□□□□□ -1.87
CDC42BPA-204ENST00000366767 NBEAQ8NFP9 2946 aa3.37□□□□□ -1.87
CDC42BPA-204ENST00000366767 TNP2Q05952 138 aa3.37□□□□□ -1.87
CDC42BPA-204ENST00000366767 DMXL1Q9Y485 3027 aa3.36□□□□□ -1.87
CDC42BPA-204ENST00000366767 ASB16-AS1Q495Z4 193 aa3.36□□□□□ -1.87
CDC42BPA-204ENST00000366767 A0A087WTM6 91 aa3.36□□□□□ -1.87
CDC42BPA-204ENST00000366767 KRTAP4-16G5E9R7 235 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-204ENST00000366767 ADGRG4Q8IZF6 3080 aa3.36□□□□□ -1.87
CDC42BPA-204ENST00000366767 CFAP47Q6ZTR5 3102 aa3.36□□□□□ -1.87
CDC42BPA-204ENST00000366767 A0A1B0GU33 70 aa3.36□□□□□ -1.87
CDC42BPA-204ENST00000366767 KRTAP16-1A8MUX0 517 aa3.35□□□□□ -1.87
CDC42BPA-204ENST00000366767 Q8N1X5 172 aa3.35□□□□□ -1.87
CDC42BPA-204ENST00000366767 HRES1P13985 223 aa3.35□□□□□ -1.87
CDC42BPA-204ENST00000366767 RELNP78509 3460 aa3.33□□□□□ -1.88
CDC42BPA-204ENST00000366767 ZNF292O60281 2723 aa3.33□□□□□ -1.88
CDC42BPA-204ENST00000366767 APCP25054 2843 aa3.33□□□□□ -1.88
CDC42BPA-204ENST00000366767 TEX15Q9BXT5 2789 aa3.32□□□□□ -1.88
CDC42BPA-204ENST00000366767 LINC00483Q53H64 154 aa3.32□□□□□ -1.88
CDC42BPA-204ENST00000366767 IGLV7-43P04211 117 aa3.32□□□□□ -1.88
CDC42BPA-204ENST00000366767 GCN1Q92616 2671 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-204ENST00000366767 A6NN06 94 aa3.32□□□□□ -1.88
CDC42BPA-204ENST00000366767 PSORS1C2Q9UIG4 136 aa3.31□□□□□ -1.88
CDC42BPA-204ENST00000366767 STAB1Q9NY15 2570 aa3.31□□□□□ -1.88
CDC42BPA-204ENST00000366767 ZZEF1O43149 2961 aa3.31□□□□□ -1.88
CDC42BPA-204ENST00000366767 ATRQ13535 2644 aa3.31□□□□□ -1.88
CDC42BPA-204ENST00000366767 LINC00472Q9H8W2 130 aa3.31□□□□□ -1.88
CDC42BPA-204ENST00000366767 LOC400499M0QZD8 3231 aa3.31□□□□□ -1.88
CDC42BPA-204ENST00000366767 DMBT1Q9UGM3 2413 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-204ENST00000366767 C9orf92A6NGG3 77 aa3.3□□□□□ -1.88
CDC42BPA-204ENST00000366767 PLAC8Q9NZF1 115 aa3.3□□□□□ -1.88
CDC42BPA-204ENST00000366767 NBEAL1Q6ZS30 2694 aa3.3□□□□□ -1.88
CDC42BPA-204ENST00000366767 WWC2-AS2Q96NR7 200 aa3.3□□□□□ -1.88
CDC42BPA-204ENST00000366767 MMP24-AS1A0A0U1RRL7 71 aa3.29□□□□□ -1.88
CDC42BPA-204ENST00000366767 ROMO1P60602 79 aa3.29□□□□□ -1.88
CDC42BPA-204ENST00000366767 COL12A1Q99715 3063 aa3.29□□□□□ -1.88
CDC42BPA-204ENST00000366767 SPENQ96T58 3664 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-204ENST00000366767 CSMD1Q96PZ7 3565 aa3.29□□□□□ -1.88
CDC42BPA-204ENST00000366767 LCE6AA0A183 80 aa3.29□□□□□ -1.88
CDC42BPA-204ENST00000366767 HECTD1Q9ULT8 2610 aa3.28□□□□□ -1.88
CDC42BPA-204ENST00000366767 ZFHX4Q86UP3 3567 aa3.28□□□□□ -1.88
CDC42BPA-204ENST00000366767 ITPR2Q14571 2701 aa3.28□□□□□ -1.88
CDC42BPA-204ENST00000366767 ATMQ13315 3056 aa3.28□□□□□ -1.88
CDC42BPA-204ENST00000366767 M0R2T5 61 aa3.27□□□□□ -1.89
CDC42BPA-204ENST00000366767 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
CDC42BPA-204ENST00000366767 ZCCHC13Q8WW36 166 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-204ENST00000366767 LINC00304Q8N9R0 145 aa3.26□□□□□ -1.89
CDC42BPA-204ENST00000366767 KRTAP29-1A8MX34 341 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-204ENST00000366767 COL6A5A8TX70 2615 aa3.26□□□□□ -1.89
CDC42BPA-204ENST00000366767 KRTAP1-5Q9BYS1 174 aa3.25□□□□□ -1.89
CDC42BPA-204ENST00000366767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.25□□□□□ -1.89
CDC42BPA-204ENST00000366767 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
CDC42BPA-204ENST00000366767 KRTAP7-1Q8IUC3 87 aa3.25□□□□□ -1.89
CDC42BPA-204ENST00000366767 DMXL2Q8TDJ6 3036 aa3.25□□□□□ -1.89
CDC42BPA-204ENST00000366767 MAST4O15021 2626 aa3.25□□□□□ -1.89
CDC42BPA-204ENST00000366767 HELZ2Q9BYK8 2649 aaKnown RBP3.25□□□□□ -1.89
CDC42BPA-204ENST00000366767 MGAM2Q2M2H8 2515 aa3.24□□□□□ -1.89
CDC42BPA-204ENST00000366767 UNC79Q9P2D8 2635 aa3.24□□□□□ -1.89
CDC42BPA-204ENST00000366767 ITPR1Q14643 2758 aa3.24□□□□□ -1.89
CDC42BPA-204ENST00000366767 ANK3Q12955 4377 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-204ENST00000366767 BSNQ9UPA5 3926 aa3.23□□□□□ -1.89
CDC42BPA-204ENST00000366767 Q5W150 140 aa3.23□□□□□ -1.89
CDC42BPA-204ENST00000366767 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
CDC42BPA-204ENST00000366767 Q6ZR54 194 aa3.23□□□□□ -1.89
CDC42BPA-204ENST00000366767 NBEAL2Q6ZNJ1 2754 aa3.22□□□□□ -1.89
CDC42BPA-204ENST00000366767 H1FX-AS1Q4G0G2 97 aa3.22□□□□□ -1.89
CDC42BPA-204ENST00000366767 NBPF19A0A087WUL8 3843 aa3.22□□□□□ -1.89
CDC42BPA-204ENST00000366767 RPL37P61927 97 aaKnown RBP3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms