RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 RBP2P50120 134 aa-1.8□□□□□ -2.7
RNU6-560P-201ENST00000364007 ITPR2Q14571 2701 aa-1.8□□□□□ -2.7
RNU6-560P-201ENST00000364007 COX6B2Q6YFQ2 88 aa-1.81□□□□□ -2.7
RNU6-560P-201ENST00000364007 CHD7Q9P2D1 2997 aa-1.81□□□□□ -2.7
RNU6-560P-201ENST00000364007 KALRNO60229 2985 aa-1.82□□□□□ -2.7
RNU6-560P-201ENST00000364007 EYSQ5T1H1 3165 aa-1.82□□□□□ -2.7
RNU6-560P-201ENST00000364007 NCMAPQ5T1S8 102 aa-1.82□□□□□ -2.7
RNU6-560P-201ENST00000364007 ATP10BO94823 1461 aa-1.82□□□□□ -2.7
RNU6-560P-201ENST00000364007 DNAH5Q8TE73 4624 aa-1.82□□□□□ -2.7
RNU6-560P-201ENST00000364007 NESP48681 1621 aa-1.83□□□□□ -2.7
RNU6-560P-201ENST00000364007 PKD1L2Q7Z442 2459 aa-1.83□□□□□ -2.7
RNU6-560P-201ENST00000364007 CFAP46Q8IYW2 2715 aa-1.84□□□□□ -2.7
RNU6-560P-201ENST00000364007 RPL38P63173 70 aaKnown RBP-1.84□□□□□ -2.7
RNU6-560P-201ENST00000364007 DOT1LQ8TEK3 1739 aa-1.84□□□□□ -2.7
RNU6-560P-201ENST00000364007 ATP7BP35670 1465 aa-1.84□□□□□ -2.7
RNU6-560P-201ENST00000364007 KRTAP20-1Q3LI63 56 aa-1.85□□□□□ -2.71
RNU6-560P-201ENST00000364007 ACBD7Q8N6N7 88 aa-1.85□□□□□ -2.71
RNU6-560P-201ENST00000364007 GAFA1Q96PS6 74 aa-1.85□□□□□ -2.71
RNU6-560P-201ENST00000364007 CSMD1Q96PZ7 3565 aa-1.85□□□□□ -2.71
RNU6-560P-201ENST00000364007 USP32Q8NFA0 1604 aa-1.87□□□□□ -2.71
RNU6-560P-201ENST00000364007 A0A1B0GUT8 65 aa-1.87□□□□□ -2.71
RNU6-560P-201ENST00000364007 IQCF6A8MYZ5 107 aa-1.87□□□□□ -2.71
RNU6-560P-201ENST00000364007 HMGN2P05204 90 aaKnown RBP-1.87□□□□□ -2.71
RNU6-560P-201ENST00000364007 DNAH17Q9UFH2 4485 aa-1.87□□□□□ -2.71
RNU6-560P-201ENST00000364007 DEFA5Q01523 94 aa-1.88□□□□□ -2.71
RNU6-560P-201ENST00000364007 PLGLAQ15195 96 aa-1.88□□□□□ -2.71
RNU6-560P-201ENST00000364007 ACACBO00763 2458 aa-1.89□□□□□ -2.71
RNU6-560P-201ENST00000364007 PLXNC1O60486 1568 aa-1.89□□□□□ -2.71
RNU6-560P-201ENST00000364007 NWD1Q149M9 1564 aa-1.9□□□□□ -2.71
RNU6-560P-201ENST00000364007 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-560P-201ENST00000364007 ANKRD50Q9ULJ7 1429 aa-1.91□□□□□ -2.71
RNU6-560P-201ENST00000364007 NEXMIFQ5QGS0 1516 aa-1.91□□□□□ -2.71
RNU6-560P-201ENST00000364007 TMEM131LA2VDJ0 1609 aa-1.91□□□□□ -2.71
RNU6-560P-201ENST00000364007 C9orf92A6NGG3 77 aa-1.91□□□□□ -2.72
RNU6-560P-201ENST00000364007 ABCC10Q5T3U5 1492 aa-1.91□□□□□ -2.72
RNU6-560P-201ENST00000364007 C5orf42Q9H799 3197 aa-1.91□□□□□ -2.72
RNU6-560P-201ENST00000364007 DNAH8Q96JB1 4490 aa-1.91□□□□□ -2.72
RNU6-560P-201ENST00000364007 ZNF831Q5JPB2 1677 aa-1.92□□□□□ -2.72
RNU6-560P-201ENST00000364007 SPENQ96T58 3664 aaKnown RBP-1.92□□□□□ -2.72
RNU6-560P-201ENST00000364007 TRRAPQ9Y4A5 3859 aa-1.92□□□□□ -2.72
RNU6-560P-201ENST00000364007 M0R143 59 aa-1.93□□□□□ -2.72
RNU6-560P-201ENST00000364007 PEA15Q15121 130 aa-1.93□□□□□ -2.72
RNU6-560P-201ENST00000364007 C20orf78Q9BR46 151 aa-1.93□□□□□ -2.72
RNU6-560P-201ENST00000364007 FAM186AA6NE01 2351 aa-1.93□□□□□ -2.72
RNU6-560P-201ENST00000364007 MT1HP80294 61 aa-1.94□□□□□ -2.72
RNU6-560P-201ENST00000364007 TRAV21A0A0B4J279 112 aa-1.95□□□□□ -2.72
RNU6-560P-201ENST00000364007 SMIM11AP58511 58 aa-1.95□□□□□ -2.72
RNU6-560P-201ENST00000364007 DNAH10Q8IVF4 4471 aa-1.96□□□□□ -2.72
RNU6-560P-201ENST00000364007 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-560P-201ENST00000364007 CYB5AP00167 134 aa-1.96□□□□□ -2.72
RNU6-560P-201ENST00000364007 WFDC9Q8NEX5 89 aa-1.96□□□□□ -2.72
RNU6-560P-201ENST00000364007 FRYQ5TBA9 3013 aa-1.97□□□□□ -2.72
RNU6-560P-201ENST00000364007 CEP162Q5TB80 1403 aa-1.97□□□□□ -2.72
RNU6-560P-201ENST00000364007 PRO3102Q9H379 93 aa-1.97□□□□□ -2.72
RNU6-560P-201ENST00000364007 WIZO95785 1651 aa-1.97□□□□□ -2.73
RNU6-560P-201ENST00000364007 DMXL2Q8TDJ6 3036 aa-1.98□□□□□ -2.73
RNU6-560P-201ENST00000364007 GYPAP02724 150 aa-1.99□□□□□ -2.73
RNU6-560P-201ENST00000364007 MAP3K1Q13233 1512 aa-2□□□□□ -2.73
RNU6-560P-201ENST00000364007 MYO9AB2RTY4 2548 aa-2□□□□□ -2.73
RNU6-560P-201ENST00000364007 C3orf79P0CE67 100 aa-2□□□□□ -2.73
RNU6-560P-201ENST00000364007 MT1HL1P0DM35 61 aa-2□□□□□ -2.73
RNU6-560P-201ENST00000364007 LINC00158P58513 81 aa-2□□□□□ -2.73
RNU6-560P-201ENST00000364007 MT1XP80297 61 aa-2□□□□□ -2.73
RNU6-560P-201ENST00000364007 SNHG12Q9BXW3 62 aa-2□□□□□ -2.73
RNU6-560P-201ENST00000364007 ARFGEF2Q9Y6D5 1785 aa-2□□□□□ -2.73
RNU6-560P-201ENST00000364007 TRIOO75962 3097 aa-2.01□□□□□ -2.73
RNU6-560P-201ENST00000364007 KRTAP19-6Q3LI70 58 aa-2.01□□□□□ -2.73
RNU6-560P-201ENST00000364007 DDX60LQ5H9U9 1706 aaKnown RBP-2.01□□□□□ -2.73
RNU6-560P-201ENST00000364007 ATMQ13315 3056 aa-2.01□□□□□ -2.73
RNU6-560P-201ENST00000364007 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.02□□□□□ -2.73
RNU6-560P-201ENST00000364007 ZFHX4Q86UP3 3567 aa-2.03□□□□□ -2.73
RNU6-560P-201ENST00000364007 TLN1Q9Y490 2541 aaKnown RBP-2.03□□□□□ -2.74
RNU6-560P-201ENST00000364007 LRBAP50851 2863 aa-2.04□□□□□ -2.74
RNU6-560P-201ENST00000364007 CEP290O15078 2479 aa-2.04□□□□□ -2.74
RNU6-560P-201ENST00000364007 DEPDC5O75140 1603 aa-2.04□□□□□ -2.74
RNU6-560P-201ENST00000364007 VPS8Q8N3P4 1428 aa-2.04□□□□□ -2.74
RNU6-560P-201ENST00000364007 ADGRG4Q8IZF6 3080 aa-2.04□□□□□ -2.74
RNU6-560P-201ENST00000364007 BOD1L1Q8NFC6 3051 aa-2.04□□□□□ -2.74
RNU6-560P-201ENST00000364007 MYMXA0A1B0GTQ4 84 aa-2.05□□□□□ -2.74
RNU6-560P-201ENST00000364007 H0YAA0 97 aa-2.05□□□□□ -2.74
RNU6-560P-201ENST00000364007 PPLO60437 1756 aa-2.06□□□□□ -2.74
RNU6-560P-201ENST00000364007 S4R3F8 94 aa-2.08□□□□□ -2.74
RNU6-560P-201ENST00000364007 PLCH1Q4KWH8 1693 aa-2.09□□□□□ -2.74
RNU6-560P-201ENST00000364007 PLIN4Q96Q06 1357 aa-2.09□□□□□ -2.74
RNU6-560P-201ENST00000364007 MT1GP13640 62 aa-2.09□□□□□ -2.74
RNU6-560P-201ENST00000364007 MYO15AQ9UKN7 3530 aa-2.09□□□□□ -2.74
RNU6-560P-201ENST00000364007 NCOA2Q15596 1464 aa-2.09□□□□□ -2.74
RNU6-560P-201ENST00000364007 MT1BP07438 61 aa-2.1□□□□□ -2.75
RNU6-560P-201ENST00000364007 PKIAP61925 76 aa-2.1□□□□□ -2.75
RNU6-560P-201ENST00000364007 PRLHP81277 87 aa-2.1□□□□□ -2.75
RNU6-560P-201ENST00000364007 ANKRD36CQ5JPF3 1778 aa-2.11□□□□□ -2.75
RNU6-560P-201ENST00000364007 DIP2BQ9P265 1576 aa-2.11□□□□□ -2.75
RNU6-560P-201ENST00000364007 BPTFQ12830 3046 aa-2.12□□□□□ -2.75
RNU6-560P-201ENST00000364007 SPTBN5Q9NRC6 3674 aaKnown RBP-2.12□□□□□ -2.75
RNU6-560P-201ENST00000364007 MAGI3Q5TCQ9 1506 aa-2.12□□□□□ -2.75
RNU6-560P-201ENST00000364007 PIK3C2BO00750 1634 aa-2.13□□□□□ -2.75
RNU6-560P-201ENST00000364007 NDUFB1O75438 58 aa-2.13□□□□□ -2.75
RNU6-560P-201ENST00000364007 S100A8P05109 93 aa-2.13□□□□□ -2.75
RNU6-560P-201ENST00000364007 ACYP1P07311 99 aa-2.13□□□□□ -2.75
RNU6-560P-201ENST00000364007 KIF14Q15058 1648 aa-2.13□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms