RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 ZFHX2Q9C0A1 2572 aaPredicted RBP2.23□□□□□ -2.05
RNU1-87P-201ENST00000363727 SPTBN2O15020 2390 aa2.23□□□□□ -2.05
RNU1-87P-201ENST00000363727 TPRP12270 2363 aaKnown RBP2.23□□□□□ -2.05
RNU1-87P-201ENST00000363727 EP400Q96L91 3159 aa2.22□□□□□ -2.05
RNU1-87P-201ENST00000363727 SPART-AS1P0CW21 52 aa2.22□□□□□ -2.05
RNU1-87P-201ENST00000363727 CEP250Q9BV73 2442 aa2.22□□□□□ -2.05
RNU1-87P-201ENST00000363727 DEFB130BP0DP73 79 aa2.21□□□□□ -2.06
RNU1-87P-201ENST00000363727 DEFB130AP0DP74 79 aa2.21□□□□□ -2.06
RNU1-87P-201ENST00000363727 LINC01556Q5JQF7 62 aa2.21□□□□□ -2.06
RNU1-87P-201ENST00000363727 CRIPTQ9P021 101 aa2.21□□□□□ -2.06
RNU1-87P-201ENST00000363727 COL6A3P12111 3177 aa2.2□□□□□ -2.06
RNU1-87P-201ENST00000363727 A0A087WTM6 91 aa2.2□□□□□ -2.06
RNU1-87P-201ENST00000363727 SSBP3-AS1Q7Z2R9 100 aa2.2□□□□□ -2.06
RNU1-87P-201ENST00000363727 PKDREJQ9NTG1 2253 aa2.2□□□□□ -2.06
RNU1-87P-201ENST00000363727 FRYQ5TBA9 3013 aa2.18□□□□□ -2.06
RNU1-87P-201ENST00000363727 VPS13AQ96RL7 3174 aa2.18□□□□□ -2.06
RNU1-87P-201ENST00000363727 Q6ZRN7 208 aaPredicted RBP2.18□□□□□ -2.06
RNU1-87P-201ENST00000363727 Q96NJ1 140 aa2.18□□□□□ -2.06
RNU1-87P-201ENST00000363727 KALRNO60229 2985 aa2.18□□□□□ -2.06
RNU1-87P-201ENST00000363727 ANKHD1Q8IWZ3 2542 aaKnown RBP2.18□□□□□ -2.06
RNU1-87P-201ENST00000363727 H1FX-AS1Q4G0G2 97 aa2.17□□□□□ -2.06
RNU1-87P-201ENST00000363727 RP1L1Q8IWN7 2480 aaPredicted RBP2.17□□□□□ -2.06
RNU1-87P-201ENST00000363727 AKAP13Q12802 2813 aa2.17□□□□□ -2.06
RNU1-87P-201ENST00000363727 EP300Q09472 2414 aaPredicted RBP2.17□□□□□ -2.06
RNU1-87P-201ENST00000363727 APC2O95996 2303 aa2.17□□□□□ -2.06
RNU1-87P-201ENST00000363727 ANKRD17O75179 2603 aaKnown RBP2.16□□□□□ -2.06
RNU1-87P-201ENST00000363727 HIVEP2P31629 2446 aa2.16□□□□□ -2.06
RNU1-87P-201ENST00000363727 UNC80Q8N2C7 3258 aa2.16□□□□□ -2.06
RNU1-87P-201ENST00000363727 A0A096LPF7 62 aa2.16□□□□□ -2.06
RNU1-87P-201ENST00000363727 CHD9Q3L8U1 2897 aa2.16□□□□□ -2.06
RNU1-87P-201ENST00000363727 MAP1AP78559 2803 aaPredicted RBP2.16□□□□□ -2.06
RNU1-87P-201ENST00000363727 CFAP54Q96N23 3096 aa2.16□□□□□ -2.06
RNU1-87P-201ENST00000363727 CREBBPQ92793 2442 aa2.16□□□□□ -2.06
RNU1-87P-201ENST00000363727 ROS1P08922 2347 aa2.16□□□□□ -2.06
RNU1-87P-201ENST00000363727 NBDYA0A0U1RRE5 68 aa2.15□□□□□ -2.07
RNU1-87P-201ENST00000363727 RPL37P61927 97 aaKnown RBP2.15□□□□□ -2.07
RNU1-87P-201ENST00000363727 FRYLO94915 3013 aa2.15□□□□□ -2.07
RNU1-87P-201ENST00000363727 COL6A6A6NMZ7 2263 aa2.15□□□□□ -2.07
RNU1-87P-201ENST00000363727 DEFB136Q30KP8 78 aa2.14□□□□□ -2.07
RNU1-87P-201ENST00000363727 Q6ZSA8 131 aa2.14□□□□□ -2.07
RNU1-87P-201ENST00000363727 DEFB124Q8NES8 71 aa2.14□□□□□ -2.07
RNU1-87P-201ENST00000363727 CNOT1A5YKK6 2376 aaKnown RBP2.14□□□□□ -2.07
RNU1-87P-201ENST00000363727 PTPRZ1P23471 2315 aaPredicted RBP2.13□□□□□ -2.07
RNU1-87P-201ENST00000363727 AKAP6Q13023 2319 aa2.13□□□□□ -2.07
RNU1-87P-201ENST00000363727 H0YAA0 97 aa2.13□□□□□ -2.07
RNU1-87P-201ENST00000363727 CHD7Q9P2D1 2997 aa2.13□□□□□ -2.07
RNU1-87P-201ENST00000363727 LAMA2P24043 3122 aaKnown RBP2.13□□□□□ -2.07
RNU1-87P-201ENST00000363727 ACACAQ13085 2346 aa2.12□□□□□ -2.07
RNU1-87P-201ENST00000363727 SZT2Q5T011 3432 aa2.12□□□□□ -2.07
RNU1-87P-201ENST00000363727 PRRC2CQ9Y520 2896 aaKnown RBP2.12□□□□□ -2.07
RNU1-87P-201ENST00000363727 PCNX1Q96RV3 2341 aa2.12□□□□□ -2.07
RNU1-87P-201ENST00000363727 CACNA1HO95180 2353 aa2.12□□□□□ -2.07
RNU1-87P-201ENST00000363727 CHD6Q8TD26 2715 aa2.11□□□□□ -2.07
RNU1-87P-201ENST00000363727 HTTP42858 3142 aa2.11□□□□□ -2.07
RNU1-87P-201ENST00000363727 SPTA1P02549 2419 aa2.11□□□□□ -2.07
RNU1-87P-201ENST00000363727 XIRP2A4UGR9 3374 aa2.11□□□□□ -2.07
RNU1-87P-201ENST00000363727 DSPP15924 2871 aaKnown RBP2.11□□□□□ -2.07
RNU1-87P-201ENST00000363727 TRIOO75962 3097 aa2.11□□□□□ -2.07
RNU1-87P-201ENST00000363727 TACC2O95359 2948 aa2.11□□□□□ -2.07
RNU1-87P-201ENST00000363727 INE1O15225 51 aa2.1□□□□□ -2.07
RNU1-87P-201ENST00000363727 C10orf99Q6UWK7 81 aa2.1□□□□□ -2.07
RNU1-87P-201ENST00000363727 KRTAP13-1Q8IUC0 172 aa2.1□□□□□ -2.07
RNU1-87P-201ENST00000363727 PLAC4Q8WY50 150 aa2.1□□□□□ -2.07
RNU1-87P-201ENST00000363727 C2CD3Q4AC94 2353 aa2.09□□□□□ -2.07
RNU1-87P-201ENST00000363727 DNAH14Q0VDD8 3507 aa2.09□□□□□ -2.07
RNU1-87P-201ENST00000363727 K7EIL1 84 aa2.09□□□□□ -2.07
RNU1-87P-201ENST00000363727 PRLHP81277 87 aa2.09□□□□□ -2.07
RNU1-87P-201ENST00000363727 SPTBN5Q9NRC6 3674 aaKnown RBP2.09□□□□□ -2.08
RNU1-87P-201ENST00000363727 TRIOBPQ9H2D6 2365 aa2.09□□□□□ -2.08
RNU1-87P-201ENST00000363727 MKI67P46013 3256 aaKnown RBP2.08□□□□□ -2.08
RNU1-87P-201ENST00000363727 PRUNE2Q8WUY3 3088 aa2.08□□□□□ -2.08
RNU1-87P-201ENST00000363727 LAMA1P25391 3075 aa2.07□□□□□ -2.08
RNU1-87P-201ENST00000363727 TENM2Q9NT68 2774 aa2.07□□□□□ -2.08
RNU1-87P-201ENST00000363727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.06□□□□□ -2.08
RNU1-87P-201ENST00000363727 USP34Q70CQ2 3546 aa2.06□□□□□ -2.08
RNU1-87P-201ENST00000363727 C5orf42Q9H799 3197 aa2.06□□□□□ -2.08
RNU1-87P-201ENST00000363727 FN1P02751 2386 aaKnown RBP2.06□□□□□ -2.08
RNU1-87P-201ENST00000363727 WDFY4Q6ZS81 3184 aa2.06□□□□□ -2.08
RNU1-87P-201ENST00000363727 NCOR2Q9Y618 2525 aa2.06□□□□□ -2.08
RNU1-87P-201ENST00000363727 CFAP47Q6ZTR5 3102 aa2.05□□□□□ -2.08
RNU1-87P-201ENST00000363727 NCOR1O75376 2440 aa2.05□□□□□ -2.08
RNU1-87P-201ENST00000363727 HTN3P15516 51 aa2.05□□□□□ -2.08
RNU1-87P-201ENST00000363727 DEFB135Q30KP9 77 aa2.05□□□□□ -2.08
RNU1-87P-201ENST00000363727 SPTAN1Q13813 2472 aaKnown RBP2.05□□□□□ -2.08
RNU1-87P-201ENST00000363727 ITPR1Q14643 2758 aa2.04□□□□□ -2.08
RNU1-87P-201ENST00000363727 LRBAP50851 2863 aa2.04□□□□□ -2.08
RNU1-87P-201ENST00000363727 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
RNU1-87P-201ENST00000363727 SPTBN4Q9H254 2564 aa2.04□□□□□ -2.08
RNU1-87P-201ENST00000363727 A0A096LNI7 61 aa2.03□□□□□ -2.08
RNU1-87P-201ENST00000363727 RPS29P62273 56 aaKnown RBP2.03□□□□□ -2.08
RNU1-87P-201ENST00000363727 DEFB123Q8N688 67 aa2.03□□□□□ -2.08
RNU1-87P-201ENST00000363727 CELSR2Q9HCU4 2923 aa2.03□□□□□ -2.08
RNU1-87P-201ENST00000363727 CSPG4Q6UVK1 2322 aa2.02□□□□□ -2.09
RNU1-87P-201ENST00000363727 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
RNU1-87P-201ENST00000363727 UBE2DNLQ8IWF7 75 aa2.02□□□□□ -2.09
RNU1-87P-201ENST00000363727 DMXL2Q8TDJ6 3036 aa2.02□□□□□ -2.09
RNU1-87P-201ENST00000363727 ASH1LQ9NR48 2969 aaKnown RBP2.02□□□□□ -2.09
RNU1-87P-201ENST00000363727 SPG11Q96JI7 2443 aa2.01□□□□□ -2.09
RNU1-87P-201ENST00000363727 SPINK1P00995 79 aa2.01□□□□□ -2.09
RNU1-87P-201ENST00000363727 VCANP13611 3396 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms