RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 CELSR2Q9HCU4 2923 aa7.12□□□□□ -1.27
CNOT4-203ENST00000361528 TENM4Q6N022 2769 aa7.11□□□□□ -1.27
CNOT4-203ENST00000361528 HELZ2Q9BYK8 2649 aaKnown RBP7.11□□□□□ -1.27
CNOT4-203ENST00000361528 VPS13CQ709C8 3753 aa7.11□□□□□ -1.27
CNOT4-203ENST00000361528 USP9YO00507 2555 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-203ENST00000361528 ZNF861PO60384 105 aa7.1□□□□□ -1.27
CNOT4-203ENST00000361528 C8orf17Q9NRJ1 99 aa7.08□□□□□ -1.28
CNOT4-203ENST00000361528 SPRR1BP22528 89 aa7.08□□□□□ -1.28
CNOT4-203ENST00000361528 POLQO75417 2590 aa7.08□□□□□ -1.28
CNOT4-203ENST00000361528 FAM168BA1KXE4 195 aa7.07□□□□□ -1.28
CNOT4-203ENST00000361528 FBN2P35556 2912 aa7.06□□□□□ -1.28
CNOT4-203ENST00000361528 SPART-AS1P0CW21 52 aa7.06□□□□□ -1.28
CNOT4-203ENST00000361528 KRTAP7-1Q8IUC3 87 aa7.06□□□□□ -1.28
CNOT4-203ENST00000361528 PTPN13Q12923 2485 aa7.06□□□□□ -1.28
CNOT4-203ENST00000361528 FASNP49327 2511 aaKnown RBP7.06□□□□□ -1.28
CNOT4-203ENST00000361528 ABCA12Q86UK0 2595 aa7.05□□□□□ -1.28
CNOT4-203ENST00000361528 ALMS1Q8TCU4 4167 aa7.05□□□□□ -1.28
CNOT4-203ENST00000361528 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
CNOT4-203ENST00000361528 DMAC1Q96GE9 116 aa7.05□□□□□ -1.28
CNOT4-203ENST00000361528 GCN1Q92616 2671 aaKnown RBP7.04□□□□□ -1.28
CNOT4-203ENST00000361528 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
CNOT4-203ENST00000361528 OXLD1Q5BKU9 147 aa7.04□□□□□ -1.28
CNOT4-203ENST00000361528 H3BNG1 76 aa7.03□□□□□ -1.28
CNOT4-203ENST00000361528 MRPL34Q9BQ48 92 aaKnown RBP7.03□□□□□ -1.28
CNOT4-203ENST00000361528 HTN3P15516 51 aa7.03□□□□□ -1.28
CNOT4-203ENST00000361528 CSPG4Q6UVK1 2322 aa7.02□□□□□ -1.29
CNOT4-203ENST00000361528 J3QKU1 62 aa7.02□□□□□ -1.29
CNOT4-203ENST00000361528 DEFB4AO15263 64 aa7.02□□□□□ -1.29
CNOT4-203ENST00000361528 A0A1B0GVX0 72 aa6.99□□□□□ -1.29
CNOT4-203ENST00000361528 LINC01556Q5JQF7 62 aa6.99□□□□□ -1.29
CNOT4-203ENST00000361528 Q96NJ1 140 aa6.99□□□□□ -1.29
CNOT4-203ENST00000361528 SETXQ7Z333 2677 aaKnown RBP6.99□□□□□ -1.29
CNOT4-203ENST00000361528 APCP25054 2843 aa6.99□□□□□ -1.29
CNOT4-203ENST00000361528 KRTAP10-9P60411 292 aa6.99□□□□□ -1.29
CNOT4-203ENST00000361528 DEFB135Q30KP9 77 aa6.99□□□□□ -1.29
CNOT4-203ENST00000361528 HECTD1Q9ULT8 2610 aa6.98□□□□□ -1.29
CNOT4-203ENST00000361528 NAV2Q8IVL1 2488 aa6.98□□□□□ -1.29
CNOT4-203ENST00000361528 PRLHP81277 87 aa6.97□□□□□ -1.29
CNOT4-203ENST00000361528 ANKRD17O75179 2603 aaKnown RBP6.96□□□□□ -1.29
CNOT4-203ENST00000361528 ITPR2Q14571 2701 aa6.96□□□□□ -1.3
CNOT4-203ENST00000361528 CCDC168Q8NDH2 2452 aa6.95□□□□□ -1.3
CNOT4-203ENST00000361528 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
CNOT4-203ENST00000361528 MAPK1IP1LQ8NDC0 245 aa6.95□□□□□ -1.3
CNOT4-203ENST00000361528 TLN2Q9Y4G6 2542 aa6.95□□□□□ -1.3
CNOT4-203ENST00000361528 NOTCH2Q04721 2471 aa6.94□□□□□ -1.3
CNOT4-203ENST00000361528 CDK2AP2O75956 126 aa6.94□□□□□ -1.3
CNOT4-203ENST00000361528 OTOGQ6ZRI0 2925 aa6.94□□□□□ -1.3
CNOT4-203ENST00000361528 ZANQ9Y493 2812 aa6.94□□□□□ -1.3
CNOT4-203ENST00000361528 IGLV7-43P04211 117 aa6.93□□□□□ -1.3
CNOT4-203ENST00000361528 UNC79Q9P2D8 2635 aa6.92□□□□□ -1.3
CNOT4-203ENST00000361528 ZNF469Q96JG9 3925 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-203ENST00000361528 IGLV5-52A0A0A0MRZ9 124 aa6.91□□□□□ -1.3
CNOT4-203ENST00000361528 JMJD1CQ15652 2540 aa6.9□□□□□ -1.3
CNOT4-203ENST00000361528 A8MUU9 505 aa6.89□□□□□ -1.31
CNOT4-203ENST00000361528 P0C880 135 aa6.89□□□□□ -1.31
CNOT4-203ENST00000361528 FLNBO75369 2602 aaKnown RBP6.88□□□□□ -1.31
CNOT4-203ENST00000361528 PDZD2O15018 2839 aa6.88□□□□□ -1.31
CNOT4-203ENST00000361528 TEX15Q9BXT5 2789 aa6.87□□□□□ -1.31
CNOT4-203ENST00000361528 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
CNOT4-203ENST00000361528 Q5W150 140 aa6.87□□□□□ -1.31
CNOT4-203ENST00000361528 DNAH10OSP0CZ25 163 aa6.86□□□□□ -1.31
CNOT4-203ENST00000361528 DEFB113Q30KQ7 82 aa6.86□□□□□ -1.31
CNOT4-203ENST00000361528 LINC00483Q53H64 154 aa6.86□□□□□ -1.31
CNOT4-203ENST00000361528 K7EIL1 84 aa6.86□□□□□ -1.31
CNOT4-203ENST00000361528 MXRA5Q9NR99 2828 aa6.86□□□□□ -1.31
CNOT4-203ENST00000361528 TENM2Q9NT68 2774 aa6.85□□□□□ -1.31
CNOT4-203ENST00000361528 ACANP16112 2415 aa6.85□□□□□ -1.31
CNOT4-203ENST00000361528 ITPR3Q14573 2671 aa6.85□□□□□ -1.31
CNOT4-203ENST00000361528 NF1P21359 2839 aa6.85□□□□□ -1.31
CNOT4-203ENST00000361528 FN1P02751 2386 aaKnown RBP6.84□□□□□ -1.31
CNOT4-203ENST00000361528 FLNAP21333 2647 aaKnown RBP6.83□□□□□ -1.32
CNOT4-203ENST00000361528 MYO9AB2RTY4 2548 aa6.83□□□□□ -1.32
CNOT4-203ENST00000361528 KRTAP1-3Q8IUG1 177 aa6.82□□□□□ -1.32
CNOT4-203ENST00000361528 LINC00304Q8N9R0 145 aa6.82□□□□□ -1.32
CNOT4-203ENST00000361528 SONP18583 2426 aaKnown RBP6.82□□□□□ -1.32
CNOT4-203ENST00000361528 A0A096LNI7 61 aa6.81□□□□□ -1.32
CNOT4-203ENST00000361528 NBEAL2Q6ZNJ1 2754 aa6.8□□□□□ -1.32
CNOT4-203ENST00000361528 LY6G6CO95867 125 aa6.78□□□□□ -1.32
CNOT4-203ENST00000361528 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
CNOT4-203ENST00000361528 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-203ENST00000361528 INAFM1C9JVW0 142 aa6.77□□□□□ -1.33
CNOT4-203ENST00000361528 CUBNO60494 3623 aa6.77□□□□□ -1.33
CNOT4-203ENST00000361528 IGKV2-30P06310 120 aa6.76□□□□□ -1.33
CNOT4-203ENST00000361528 CASC10Q5T4H9 136 aa6.76□□□□□ -1.33
CNOT4-203ENST00000361528 MTORP42345 2549 aa6.75□□□□□ -1.33
CNOT4-203ENST00000361528 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
CNOT4-203ENST00000361528 NIPBLQ6KC79 2804 aaeCLIP6.75□□□□□ -1.33
CNOT4-203ENST00000361528 SMR3AQ99954 134 aa6.73□□□□□ -1.33
CNOT4-203ENST00000361528 KRTAP13-1Q8IUC0 172 aa6.73□□□□□ -1.33
CNOT4-203ENST00000361528 IGLV9-49A0A0B4J1Y8 123 aa6.72□□□□□ -1.33
CNOT4-203ENST00000361528 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
CNOT4-203ENST00000361528 CHTF8P0CG12 524 aa6.72□□□□□ -1.33
CNOT4-203ENST00000361528 HIVEP1P15822 2718 aa6.71□□□□□ -1.34
CNOT4-203ENST00000361528 NUPR2A6NF83 97 aa6.7□□□□□ -1.34
CNOT4-203ENST00000361528 KRTAP11-1Q8IUC1 163 aa6.7□□□□□ -1.34
CNOT4-203ENST00000361528 H0YAA0 97 aa6.7□□□□□ -1.34
CNOT4-203ENST00000361528 KRTAP1-1Q07627 177 aa6.69□□□□□ -1.34
CNOT4-203ENST00000361528 HIVEP2P31629 2446 aa6.69□□□□□ -1.34
CNOT4-203ENST00000361528 ANK3Q12955 4377 aaKnown RBP6.68□□□□□ -1.34
CNOT4-203ENST00000361528 PANO1I0J062 215 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms