RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 ATRQ13535 2644 aa7.47□□□□□ -1.21
CCDC144A-204ENST00000360524 HTTP42858 3142 aa7.46□□□□□ -1.22
CCDC144A-204ENST00000360524 SPRR1AP35321 89 aa7.45□□□□□ -1.22
CCDC144A-204ENST00000360524 RANBP2P49792 3224 aaKnown RBP7.45□□□□□ -1.22
CCDC144A-204ENST00000360524 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
CCDC144A-204ENST00000360524 HELZ2Q9BYK8 2649 aaKnown RBP7.44□□□□□ -1.22
CCDC144A-204ENST00000360524 S4R3F8 94 aa7.43□□□□□ -1.22
CCDC144A-204ENST00000360524 MAST4O15021 2626 aa7.43□□□□□ -1.22
CCDC144A-204ENST00000360524 Q5W150 140 aa7.42□□□□□ -1.22
CCDC144A-204ENST00000360524 CFAP46Q8IYW2 2715 aa7.41□□□□□ -1.22
CCDC144A-204ENST00000360524 CENPEQ02224 2701 aa7.41□□□□□ -1.22
CCDC144A-204ENST00000360524 M0R2T5 61 aa7.4□□□□□ -1.22
CCDC144A-204ENST00000360524 LINC00472Q9H8W2 130 aa7.4□□□□□ -1.23
CCDC144A-204ENST00000360524 ASB16-AS1Q495Z4 193 aa7.39□□□□□ -1.23
CCDC144A-204ENST00000360524 ROMO1P60602 79 aa7.39□□□□□ -1.23
CCDC144A-204ENST00000360524 SPRR1BP22528 89 aa7.38□□□□□ -1.23
CCDC144A-204ENST00000360524 CFAP54Q96N23 3096 aa7.38□□□□□ -1.23
CCDC144A-204ENST00000360524 LAMA3Q16787 3333 aa7.37□□□□□ -1.23
CCDC144A-204ENST00000360524 KRTAP1-5Q9BYS1 174 aa7.37□□□□□ -1.23
CCDC144A-204ENST00000360524 MKI67P46013 3256 aaKnown RBP7.36□□□□□ -1.23
CCDC144A-204ENST00000360524 KRTAP16-1A8MUX0 517 aa7.35□□□□□ -1.23
CCDC144A-204ENST00000360524 MGAQ8IWI9 3026 aa7.33□□□□□ -1.24
CCDC144A-204ENST00000360524 A6NN06 94 aa7.33□□□□□ -1.24
CCDC144A-204ENST00000360524 KRTAP26-1Q6PEX3 210 aa7.33□□□□□ -1.24
CCDC144A-204ENST00000360524 RPL37P61927 97 aaKnown RBP7.32□□□□□ -1.24
CCDC144A-204ENST00000360524 Q5VSD8 79 aa7.31□□□□□ -1.24
CCDC144A-204ENST00000360524 A0A0C4DFX4 3053 aa7.31□□□□□ -1.24
CCDC144A-204ENST00000360524 LCE6AA0A183 80 aa7.3□□□□□ -1.24
CCDC144A-204ENST00000360524 BRCA2P51587 3418 aa7.3□□□□□ -1.24
CCDC144A-204ENST00000360524 TRANK1O15050 2925 aa7.29□□□□□ -1.24
CCDC144A-204ENST00000360524 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
CCDC144A-204ENST00000360524 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
CCDC144A-204ENST00000360524 AKAP13Q12802 2813 aa7.27□□□□□ -1.25
CCDC144A-204ENST00000360524 LAMA2P24043 3122 aaKnown RBP7.27□□□□□ -1.25
CCDC144A-204ENST00000360524 KRTAP10-2P60368 255 aa7.26□□□□□ -1.25
CCDC144A-204ENST00000360524 SEC61BP60468 96 aaKnown RBP7.25□□□□□ -1.25
CCDC144A-204ENST00000360524 CHD6Q8TD26 2715 aa7.25□□□□□ -1.25
CCDC144A-204ENST00000360524 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
CCDC144A-204ENST00000360524 R4GN34 69 aa7.25□□□□□ -1.25
CCDC144A-204ENST00000360524 Q6ZR54 194 aa7.23□□□□□ -1.25
CCDC144A-204ENST00000360524 WDFY4Q6ZS81 3184 aa7.22□□□□□ -1.25
CCDC144A-204ENST00000360524 ZNF292O60281 2723 aa7.21□□□□□ -1.25
CCDC144A-204ENST00000360524 KRTAP29-1A8MX34 341 aaPredicted RBP7.21□□□□□ -1.25
CCDC144A-204ENST00000360524 KRTAP25-1Q3LHN0 102 aa7.21□□□□□ -1.25
CCDC144A-204ENST00000360524 ADM2Q7Z4H4 148 aa7.21□□□□□ -1.26
CCDC144A-204ENST00000360524 TEX15Q9BXT5 2789 aa7.19□□□□□ -1.26
CCDC144A-204ENST00000360524 PRUNE2Q8WUY3 3088 aa7.19□□□□□ -1.26
CCDC144A-204ENST00000360524 PANO1I0J062 215 aa7.18□□□□□ -1.26
CCDC144A-204ENST00000360524 TEP1Q99973 2627 aaKnown RBP7.18□□□□□ -1.26
CCDC144A-204ENST00000360524 A8MU10 97 aa7.17□□□□□ -1.26
CCDC144A-204ENST00000360524 M0QZ58 72 aa7.16□□□□□ -1.26
CCDC144A-204ENST00000360524 UNC80Q8N2C7 3258 aa7.16□□□□□ -1.26
CCDC144A-204ENST00000360524 STAB1Q9NY15 2570 aa7.15□□□□□ -1.26
CCDC144A-204ENST00000360524 NDUFAF8A1L188 74 aa7.14□□□□□ -1.27
CCDC144A-204ENST00000360524 KRTAP4-16G5E9R7 235 aaPredicted RBP7.14□□□□□ -1.27
CCDC144A-204ENST00000360524 XIRP2A4UGR9 3374 aa7.14□□□□□ -1.27
CCDC144A-204ENST00000360524 TRIOO75962 3097 aa7.14□□□□□ -1.27
CCDC144A-204ENST00000360524 GCN1Q92616 2671 aaKnown RBP7.12□□□□□ -1.27
CCDC144A-204ENST00000360524 A0A087X002 238 aa7.1□□□□□ -1.27
CCDC144A-204ENST00000360524 NOTCH2NLQ7Z3S9 236 aa7.1□□□□□ -1.27
CCDC144A-204ENST00000360524 DSPP15924 2871 aaKnown RBP7.09□□□□□ -1.27
CCDC144A-204ENST00000360524 NBEAL1Q6ZS30 2694 aa7.08□□□□□ -1.28
CCDC144A-204ENST00000360524 COL6A5A8TX70 2615 aa7.07□□□□□ -1.28
CCDC144A-204ENST00000360524 UNC79Q9P2D8 2635 aa7.07□□□□□ -1.28
CCDC144A-204ENST00000360524 MAP1AP78559 2803 aaPredicted RBP7.06□□□□□ -1.28
CCDC144A-204ENST00000360524 VPS13AQ96RL7 3174 aa7.05□□□□□ -1.28
CCDC144A-204ENST00000360524 CDH23Q9H251 3354 aa7.05□□□□□ -1.28
CCDC144A-204ENST00000360524 SETXQ7Z333 2677 aaKnown RBP7.05□□□□□ -1.28
CCDC144A-204ENST00000360524 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
CCDC144A-204ENST00000360524 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
CCDC144A-204ENST00000360524 FRYQ5TBA9 3013 aa7.02□□□□□ -1.29
CCDC144A-204ENST00000360524 NBEAL2Q6ZNJ1 2754 aa7.01□□□□□ -1.29
CCDC144A-204ENST00000360524 IGSF10Q6WRI0 2623 aa7.01□□□□□ -1.29
CCDC144A-204ENST00000360524 Q6ZRN7 208 aaPredicted RBP6.98□□□□□ -1.29
CCDC144A-204ENST00000360524 FLG2Q5D862 2391 aaPredicted RBP6.98□□□□□ -1.29
CCDC144A-204ENST00000360524 PLAC4Q8WY50 150 aa6.97□□□□□ -1.29
CCDC144A-204ENST00000360524 CELSR3Q9NYQ7 3312 aa6.97□□□□□ -1.29
CCDC144A-204ENST00000360524 RPS29P62273 56 aaKnown RBP6.96□□□□□ -1.3
CCDC144A-204ENST00000360524 UBR5O95071 2799 aaPredicted RBP6.94□□□□□ -1.3
CCDC144A-204ENST00000360524 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
CCDC144A-204ENST00000360524 A8MUU9 505 aa6.92□□□□□ -1.3
CCDC144A-204ENST00000360524 FREM2Q5SZK8 3169 aa6.91□□□□□ -1.3
CCDC144A-204ENST00000360524 C20orf166-AS1Q96NR2 134 aa6.89□□□□□ -1.31
CCDC144A-204ENST00000360524 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
CCDC144A-204ENST00000360524 SZT2Q5T011 3432 aa6.86□□□□□ -1.31
CCDC144A-204ENST00000360524 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
CCDC144A-204ENST00000360524 BAHCC1Q9P281 2608 aa6.85□□□□□ -1.31
CCDC144A-204ENST00000360524 VCANP13611 3396 aa6.85□□□□□ -1.31
CCDC144A-204ENST00000360524 KALRNO60229 2985 aa6.84□□□□□ -1.31
CCDC144A-204ENST00000360524 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
CCDC144A-204ENST00000360524 LAMA1P25391 3075 aa6.83□□□□□ -1.32
CCDC144A-204ENST00000360524 DNAH14Q0VDD8 3507 aa6.83□□□□□ -1.32
CCDC144A-204ENST00000360524 ITPR2Q14571 2701 aa6.83□□□□□ -1.32
CCDC144A-204ENST00000360524 ITPR1Q14643 2758 aa6.82□□□□□ -1.32
CCDC144A-204ENST00000360524 ATMQ13315 3056 aa6.8□□□□□ -1.32
CCDC144A-204ENST00000360524 STAB2Q8WWQ8 2551 aa6.8□□□□□ -1.32
CCDC144A-204ENST00000360524 TACC2O95359 2948 aa6.78□□□□□ -1.32
CCDC144A-204ENST00000360524 KRTAP21-3Q3LHN1 58 aa6.78□□□□□ -1.32
CCDC144A-204ENST00000360524 NSD1Q96L73 2696 aaPredicted RBP6.78□□□□□ -1.32
CCDC144A-204ENST00000360524 FLNCQ14315 2725 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms