RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 LINC00304Q8N9R0 145 aa10.6□□□□□ -0.71
LMBR1-202ENST00000359422 UNC79Q9P2D8 2635 aa10.6□□□□□ -0.71
LMBR1-202ENST00000359422 CR1P17927 2039 aa10.6□□□□□ -0.71
LMBR1-202ENST00000359422 J3QL48 77 aa10.6□□□□□ -0.71
LMBR1-202ENST00000359422 CASC10Q5T4H9 136 aa10.59□□□□□ -0.71
LMBR1-202ENST00000359422 COL12A1Q99715 3063 aa10.59□□□□□ -0.71
LMBR1-202ENST00000359422 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
LMBR1-202ENST00000359422 CYP4F30PQ9H0H9 118 aa10.59□□□□□ -0.71
LMBR1-202ENST00000359422 LRBAP50851 2863 aa10.58□□□□□ -0.72
LMBR1-202ENST00000359422 PLA2G2DQ9UNK4 145 aa10.58□□□□□ -0.72
LMBR1-202ENST00000359422 DMXL1Q9Y485 3027 aa10.57□□□□□ -0.72
LMBR1-202ENST00000359422 A0A1W2PNM2 257 aa10.56□□□□□ -0.72
LMBR1-202ENST00000359422 ZFHX4Q86UP3 3567 aa10.56□□□□□ -0.72
LMBR1-202ENST00000359422 PSORS1C2Q9UIG4 136 aa10.55□□□□□ -0.72
LMBR1-202ENST00000359422 C9orf92A6NGG3 77 aa10.55□□□□□ -0.72
LMBR1-202ENST00000359422 H7BZZ5 65 aa10.54□□□□□ -0.72
LMBR1-202ENST00000359422 COX6B2Q6YFQ2 88 aa10.53□□□□□ -0.72
LMBR1-202ENST00000359422 IGLV7-43P04211 117 aa10.52□□□□□ -0.73
LMBR1-202ENST00000359422 SPINT4Q6UDR6 99 aa10.52□□□□□ -0.73
LMBR1-202ENST00000359422 KRTAP1-3Q8IUG1 177 aa10.5□□□□□ -0.73
LMBR1-202ENST00000359422 SPRR4Q96PI1 79 aa10.5□□□□□ -0.73
LMBR1-202ENST00000359422 CNBPP62633 177 aaKnown RBP10.48□□□□□ -0.73
LMBR1-202ENST00000359422 APLNQ9ULZ1 77 aa10.48□□□□□ -0.73
LMBR1-202ENST00000359422 MIR22HGQ0VDD5 57 aa10.47□□□□□ -0.73
LMBR1-202ENST00000359422 KRTAP1-1Q07627 177 aa10.47□□□□□ -0.73
LMBR1-202ENST00000359422 LINC00336Q6ZUF6 198 aa10.47□□□□□ -0.73
LMBR1-202ENST00000359422 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
LMBR1-202ENST00000359422 ZNF575Q86XF7 245 aa10.47□□□□□ -0.73
LMBR1-202ENST00000359422 STAB2Q8WWQ8 2551 aa10.45□□□□□ -0.74
LMBR1-202ENST00000359422 LAMA5O15230 3695 aa10.44□□□□□ -0.74
LMBR1-202ENST00000359422 IGLV5-48A0A075B6I7 105 aa10.43□□□□□ -0.74
LMBR1-202ENST00000359422 UBR5O95071 2799 aaPredicted RBP10.4□□□□□ -0.74
LMBR1-202ENST00000359422 CRIPTQ9P021 101 aa10.4□□□□□ -0.74
LMBR1-202ENST00000359422 IGLV5-37A0A075B6J1 123 aa10.39□□□□□ -0.75
LMBR1-202ENST00000359422 FLNCQ14315 2725 aa10.37□□□□□ -0.75
LMBR1-202ENST00000359422 Q8N1X5 172 aa10.37□□□□□ -0.75
LMBR1-202ENST00000359422 ASH1LQ9NR48 2969 aaKnown RBP10.36□□□□□ -0.75
LMBR1-202ENST00000359422 ITPR1Q14643 2758 aa10.35□□□□□ -0.75
LMBR1-202ENST00000359422 FAM104AQ969W3 186 aa10.34□□□□□ -0.75
LMBR1-202ENST00000359422 SPANXA2-OT1Q8N9U9 137 aa10.33□□□□□ -0.76
LMBR1-202ENST00000359422 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
LMBR1-202ENST00000359422 TNRC18O15417 2968 aaPredicted RBP10.33□□□□□ -0.76
LMBR1-202ENST00000359422 RELNP78509 3460 aa10.32□□□□□ -0.76
LMBR1-202ENST00000359422 TNP2Q05952 138 aa10.31□□□□□ -0.76
LMBR1-202ENST00000359422 PRR26Q8N8Z3 221 aa10.31□□□□□ -0.76
LMBR1-202ENST00000359422 LINC01554Q52M75 96 aa10.31□□□□□ -0.76
LMBR1-202ENST00000359422 NSD1Q96L73 2696 aaPredicted RBP10.31□□□□□ -0.76
LMBR1-202ENST00000359422 RBM12B-AS1Q9P1G2 102 aa10.29□□□□□ -0.76
LMBR1-202ENST00000359422 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
LMBR1-202ENST00000359422 OCR1Q9BZK8 76 aa10.29□□□□□ -0.76
LMBR1-202ENST00000359422 A0A0D9SG42 100 aa10.28□□□□□ -0.76
LMBR1-202ENST00000359422 SMG1Q96Q15 3661 aaKnown RBP10.27□□□□□ -0.76
LMBR1-202ENST00000359422 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
LMBR1-202ENST00000359422 CD164Q04900 197 aa10.24□□□□□ -0.77
LMBR1-202ENST00000359422 KTN1-AS1Q86SY8 53 aa10.2□□□□□ -0.78
LMBR1-202ENST00000359422 ZANQ9Y493 2812 aa10.2□□□□□ -0.78
LMBR1-202ENST00000359422 CDC42SE1Q9NRR8 79 aa10.18□□□□□ -0.78
LMBR1-202ENST00000359422 LCA10Q71F78 164 aa10.18□□□□□ -0.78
LMBR1-202ENST00000359422 WIPF1O43516 503 aa10.15□□□□□ -0.78
LMBR1-202ENST00000359422 Q8NDZ9 215 aa10.14□□□□□ -0.79
LMBR1-202ENST00000359422 CSMD1Q96PZ7 3565 aa10.13□□□□□ -0.79
LMBR1-202ENST00000359422 HRES1P13985 223 aa10.12□□□□□ -0.79
LMBR1-202ENST00000359422 IGSF10Q6WRI0 2623 aa10.12□□□□□ -0.79
LMBR1-202ENST00000359422 Q6ZSA8 131 aa10.12□□□□□ -0.79
LMBR1-202ENST00000359422 IGLV7-46A0A075B6I9 117 aa10.11□□□□□ -0.79
LMBR1-202ENST00000359422 SPENQ96T58 3664 aaKnown RBP10.1□□□□□ -0.79
LMBR1-202ENST00000359422 CRYBG3Q68DQ2 2970 aa10.1□□□□□ -0.79
LMBR1-202ENST00000359422 SPRR1AP35321 89 aa10.08□□□□□ -0.8
LMBR1-202ENST00000359422 Q1T7F1 81 aa10.08□□□□□ -0.8
LMBR1-202ENST00000359422 UTP20O75691 2785 aaKnown RBP10.07□□□□□ -0.8
LMBR1-202ENST00000359422 MMP24-AS1A0A0U1RRL7 71 aa10.06□□□□□ -0.8
LMBR1-202ENST00000359422 FAM229BQ4G0N7 80 aa10.06□□□□□ -0.8
LMBR1-202ENST00000359422 Q8N9P0 234 aaPredicted RBP10.05□□□□□ -0.8
LMBR1-202ENST00000359422 A0A1B0GU33 70 aa10.05□□□□□ -0.8
LMBR1-202ENST00000359422 SVEP1Q4LDE5 3571 aa10.04□□□□□ -0.8
LMBR1-202ENST00000359422 PLAC8Q9NZF1 115 aa10.04□□□□□ -0.8
LMBR1-202ENST00000359422 CUBNO60494 3623 aa10.03□□□□□ -0.8
LMBR1-202ENST00000359422 DCHS2Q6V1P9 2916 aa10.02□□□□□ -0.81
LMBR1-202ENST00000359422 NF1P21359 2839 aa10.02□□□□□ -0.81
LMBR1-202ENST00000359422 CAMK2N1Q7Z7J9 78 aa9.99□□□□□ -0.81
LMBR1-202ENST00000359422 FBN2P35556 2912 aa9.98□□□□□ -0.81
LMBR1-202ENST00000359422 ZCCHC13Q8WW36 166 aaKnown RBP9.97□□□□□ -0.81
LMBR1-202ENST00000359422 SPRR1BP22528 89 aa9.96□□□□□ -0.81
LMBR1-202ENST00000359422 KRTAP1-5Q9BYS1 174 aa9.96□□□□□ -0.82
LMBR1-202ENST00000359422 LINC00472Q9H8W2 130 aa9.96□□□□□ -0.82
LMBR1-202ENST00000359422 CELSR2Q9HCU4 2923 aa9.95□□□□□ -0.82
LMBR1-202ENST00000359422 HRNRQ86YZ3 2850 aaPredicted RBP9.95□□□□□ -0.82
LMBR1-202ENST00000359422 CYSTM1Q9H1C7 97 aa9.94□□□□□ -0.82
LMBR1-202ENST00000359422 LUZP6Q538Z0 58 aa9.93□□□□□ -0.82
LMBR1-202ENST00000359422 Q75L30 129 aa9.93□□□□□ -0.82
LMBR1-202ENST00000359422 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
LMBR1-202ENST00000359422 KMT2BQ9UMN6 2715 aaPredicted RBP9.9□□□□□ -0.82
LMBR1-202ENST00000359422 ITPR2Q14571 2701 aa9.9□□□□□ -0.83
LMBR1-202ENST00000359422 CELSR1Q9NYQ6 3014 aa9.89□□□□□ -0.83
LMBR1-202ENST00000359422 Q5W150 140 aa9.89□□□□□ -0.83
LMBR1-202ENST00000359422 M0R2T5 61 aa9.89□□□□□ -0.83
LMBR1-202ENST00000359422 CSAG1Q6PB30 78 aa9.89□□□□□ -0.83
LMBR1-202ENST00000359422 FP248Q71RG6 208 aaPredicted RBP9.88□□□□□ -0.83
LMBR1-202ENST00000359422 KRTAP26-1Q6PEX3 210 aa9.87□□□□□ -0.83
LMBR1-202ENST00000359422 SPINK7P58062 85 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms