RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 LINC01556Q5JQF7 62 aa9.16□□□□□ -0.94
APP-205ENST00000358918 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
APP-205ENST00000358918 LIMD2Q9BT23 127 aa9.15□□□□□ -0.95
APP-205ENST00000358918 TENM3Q9P273 2699 aa9.15□□□□□ -0.95
APP-205ENST00000358918 NOTCH1P46531 2555 aa9.14□□□□□ -0.95
APP-205ENST00000358918 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
APP-205ENST00000358918 IGFL1Q6UW32 110 aa9.14□□□□□ -0.95
APP-205ENST00000358918 H3BPC8 53 aa9.14□□□□□ -0.95
APP-205ENST00000358918 MRPL55Q7Z7F7 128 aaKnown RBP9.14□□□□□ -0.95
APP-205ENST00000358918 H0Y9P7 68 aa9.13□□□□□ -0.95
APP-205ENST00000358918 CD164Q04900 197 aa9.13□□□□□ -0.95
APP-205ENST00000358918 DNAH3Q8TD57 4116 aa9.13□□□□□ -0.95
APP-205ENST00000358918 A0A0G2JQZ4 141 aa9.13□□□□□ -0.95
APP-205ENST00000358918 A0A1W2PNN7 141 aa9.13□□□□□ -0.95
APP-205ENST00000358918 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
APP-205ENST00000358918 A8MU10 97 aa9.12□□□□□ -0.95
APP-205ENST00000358918 C11orf45Q8TAV5 145 aa9.12□□□□□ -0.95
APP-205ENST00000358918 A0A087WSZ3 146 aa9.12□□□□□ -0.95
APP-205ENST00000358918 REG3GQ6UW15 175 aa9.11□□□□□ -0.95
APP-205ENST00000358918 KRTAP7-1Q8IUC3 87 aa9.11□□□□□ -0.95
APP-205ENST00000358918 PRR15LQ9BU68 103 aa9.11□□□□□ -0.95
APP-205ENST00000358918 DEFB131BA0A096LNP1 70 aa9.1□□□□□ -0.95
APP-205ENST00000358918 KRTAP29-1A8MX34 341 aaPredicted RBP9.1□□□□□ -0.95
APP-205ENST00000358918 RPL37AP61513 92 aaKnown RBP9.09□□□□□ -0.95
APP-205ENST00000358918 CASC2Q6XLA1 102 aa9.09□□□□□ -0.95
APP-205ENST00000358918 C16orf90A8MZG2 172 aa9.07□□□□□ -0.96
APP-205ENST00000358918 K7EIL1 84 aa9.07□□□□□ -0.96
APP-205ENST00000358918 LINC00588Q9Y4M8 146 aa9.07□□□□□ -0.96
APP-205ENST00000358918 IGLV8-61A0A075B6I0 122 aa9.06□□□□□ -0.96
APP-205ENST00000358918 KTN1-AS1Q86SY8 53 aa9.05□□□□□ -0.96
APP-205ENST00000358918 NBEAL1Q6ZS30 2694 aa9.05□□□□□ -0.96
APP-205ENST00000358918 DNAH10OSP0CZ25 163 aa9.05□□□□□ -0.96
APP-205ENST00000358918 Q75L30 129 aa9.04□□□□□ -0.96
APP-205ENST00000358918 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
APP-205ENST00000358918 SPTSSBQ8NFR3 76 aa9.04□□□□□ -0.96
APP-205ENST00000358918 CNBPP62633 177 aaKnown RBP9.03□□□□□ -0.96
APP-205ENST00000358918 CASC10Q5T4H9 136 aa9.02□□□□□ -0.97
APP-205ENST00000358918 ATP11AUNQ6ZP68 121 aa9.02□□□□□ -0.97
APP-205ENST00000358918 A6NED7 52 aa9.01□□□□□ -0.97
APP-205ENST00000358918 COA5Q86WW8 74 aa9.01□□□□□ -0.97
APP-205ENST00000358918 A8MWP4 228 aa9.01□□□□□ -0.97
APP-205ENST00000358918 PRLHP81277 87 aa9.01□□□□□ -0.97
APP-205ENST00000358918 LOC101927531A0A1B0GV80 90 aa9□□□□□ -0.97
APP-205ENST00000358918 MGAM2Q2M2H8 2515 aa9□□□□□ -0.97
APP-205ENST00000358918 LCA10Q71F78 164 aa9□□□□□ -0.97
APP-205ENST00000358918 MDFIQ99750 246 aa8.99□□□□□ -0.97
APP-205ENST00000358918 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
APP-205ENST00000358918 IGLV7-46A0A075B6I9 117 aa8.97□□□□□ -0.97
APP-205ENST00000358918 NDUFS5O43920 106 aa8.97□□□□□ -0.97
APP-205ENST00000358918 LINC00472Q9H8W2 130 aa8.95□□□□□ -0.98
APP-205ENST00000358918 RBM12B-AS1Q9P1G2 102 aa8.95□□□□□ -0.98
APP-205ENST00000358918 CDC42SE1Q9NRR8 79 aa8.94□□□□□ -0.98
APP-205ENST00000358918 A6NN06 94 aa8.93□□□□□ -0.98
APP-205ENST00000358918 H0Y9J4 135 aa8.93□□□□□ -0.98
APP-205ENST00000358918 MMP24-AS1A0A0U1RRL7 71 aa8.92□□□□□ -0.98
APP-205ENST00000358918 PHF5AQ7RTV0 110 aaKnown RBP8.91□□□□□ -0.98
APP-205ENST00000358918 PCOTHQ58A44 107 aa8.9□□□□□ -0.98
APP-205ENST00000358918 IGKV2-24A0A0C4DH68 120 aa8.9□□□□□ -0.99
APP-205ENST00000358918 LINC01558Q9Y6Z2 57 aa8.9□□□□□ -0.99
APP-205ENST00000358918 A0A096LNI7 61 aa8.89□□□□□ -0.99
APP-205ENST00000358918 SPRR1BP22528 89 aa8.88□□□□□ -0.99
APP-205ENST00000358918 SPAG11AQ6PDA7 123 aa8.87□□□□□ -0.99
APP-205ENST00000358918 TP53AIP1Q9HCN2 124 aa8.86□□□□□ -0.99
APP-205ENST00000358918 PLAC8Q9NZF1 115 aa8.85□□□□□ -0.99
APP-205ENST00000358918 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
APP-205ENST00000358918 MOBPQ13875 183 aa8.84□□□□□ -0.99
APP-205ENST00000358918 COL7A1Q02388 2944 aa8.83□□□□□ -1
APP-205ENST00000358918 STAB2Q8WWQ8 2551 aa8.83□□□□□ -1
APP-205ENST00000358918 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
APP-205ENST00000358918 Q6ZR54 194 aa8.8□□□□□ -1
APP-205ENST00000358918 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
APP-205ENST00000358918 LYSTQ99698 3801 aa8.79□□□□□ -1
APP-205ENST00000358918 DNAH1Q9P2D7 4330 aa8.79□□□□□ -1
APP-205ENST00000358918 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
APP-205ENST00000358918 SPINK7P58062 85 aa8.78□□□□□ -1
APP-205ENST00000358918 HRES1P13985 223 aa8.78□□□□□ -1
APP-205ENST00000358918 C8orf17Q9NRJ1 99 aa8.77□□□□□ -1.01
APP-205ENST00000358918 KRTAP1-5Q9BYS1 174 aa8.77□□□□□ -1.01
APP-205ENST00000358918 UBE2DNLQ8IWF7 75 aa8.76□□□□□ -1.01
APP-205ENST00000358918 APLNQ9ULZ1 77 aa8.76□□□□□ -1.01
APP-205ENST00000358918 Q96NJ1 140 aa8.75□□□□□ -1.01
APP-205ENST00000358918 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
APP-205ENST00000358918 IGHV6-1A0A0B4J1U7 121 aa8.71□□□□□ -1.02
APP-205ENST00000358918 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
APP-205ENST00000358918 CSMD3Q7Z407 3707 aa8.7□□□□□ -1.02
APP-205ENST00000358918 DNAH10Q8IVF4 4471 aa8.69□□□□□ -1.02
APP-205ENST00000358918 IGLV9-49A0A0B4J1Y8 123 aa8.69□□□□□ -1.02
APP-205ENST00000358918 CDK2AP2O75956 126 aa8.69□□□□□ -1.02
APP-205ENST00000358918 MRPL34Q9BQ48 92 aaKnown RBP8.69□□□□□ -1.02
APP-205ENST00000358918 DNAH7Q8WXX0 4024 aa8.67□□□□□ -1.02
APP-205ENST00000358918 C14orf177Q52M58 125 aa8.67□□□□□ -1.02
APP-205ENST00000358918 DYNC2H1Q8NCM8 4307 aaKnown RBP8.66□□□□□ -1.02
APP-205ENST00000358918 TENM2Q9NT68 2774 aa8.65□□□□□ -1.02
APP-205ENST00000358918 NUPR2A6NF83 97 aa8.65□□□□□ -1.02
APP-205ENST00000358918 KRTAP13-1Q8IUC0 172 aa8.65□□□□□ -1.02
APP-205ENST00000358918 PLECQ15149 4684 aaKnown RBP8.64□□□□□ -1.03
APP-205ENST00000358918 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
APP-205ENST00000358918 PRKDCP78527 4128 aaKnown RBP8.63□□□□□ -1.03
APP-205ENST00000358918 LINC00313P59037 77 aa8.62□□□□□ -1.03
APP-205ENST00000358918 NBDYA0A0U1RRE5 68 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms