RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 H0Y9P7 68 aa4.22□□□□□ -1.73
CSDE1-203ENST00000358528 NDUFB1O75438 58 aa4.22□□□□□ -1.73
CSDE1-203ENST00000358528 IGFL1Q6UW32 110 aa4.22□□□□□ -1.73
CSDE1-203ENST00000358528 V9GYY9 64 aa4.22□□□□□ -1.73
CSDE1-203ENST00000358528 WIPF1O43516 503 aa4.22□□□□□ -1.73
CSDE1-203ENST00000358528 DSCR10P59022 87 aa4.22□□□□□ -1.73
CSDE1-203ENST00000358528 PHF5AQ7RTV0 110 aaKnown RBP4.22□□□□□ -1.73
CSDE1-203ENST00000358528 DNAH10OSP0CZ25 163 aa4.21□□□□□ -1.73
CSDE1-203ENST00000358528 TRRAPQ9Y4A5 3859 aa4.21□□□□□ -1.74
CSDE1-203ENST00000358528 CHKB-CPT1BH3BT56 60 aa4.21□□□□□ -1.74
CSDE1-203ENST00000358528 B9D2Q9BPU9 175 aa4.21□□□□□ -1.74
CSDE1-203ENST00000358528 A8MUN3 132 aa4.2□□□□□ -1.74
CSDE1-203ENST00000358528 F8WDY8 70 aa4.2□□□□□ -1.74
CSDE1-203ENST00000358528 PRR15LQ9BU68 103 aa4.2□□□□□ -1.74
CSDE1-203ENST00000358528 KRTAP24-1Q3LI83 254 aa4.19□□□□□ -1.74
CSDE1-203ENST00000358528 SPINK6Q6UWN8 80 aa4.19□□□□□ -1.74
CSDE1-203ENST00000358528 hDV103S1A0JD37 113 aa4.18□□□□□ -1.74
CSDE1-203ENST00000358528 STAB2Q8WWQ8 2551 aa4.18□□□□□ -1.74
CSDE1-203ENST00000358528 A6NED7 52 aa4.17□□□□□ -1.74
CSDE1-203ENST00000358528 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
CSDE1-203ENST00000358528 IGHV6-1A0A0B4J1U7 121 aa4.17□□□□□ -1.74
CSDE1-203ENST00000358528 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
CSDE1-203ENST00000358528 TLX1NBP0CAT3 122 aa4.17□□□□□ -1.74
CSDE1-203ENST00000358528 A0A1B0GW54 56 aa4.16□□□□□ -1.74
CSDE1-203ENST00000358528 SPRR4Q96PI1 79 aa4.16□□□□□ -1.74
CSDE1-203ENST00000358528 C16orf90A8MZG2 172 aa4.15□□□□□ -1.75
CSDE1-203ENST00000358528 PLA2G2DQ9UNK4 145 aa4.15□□□□□ -1.75
CSDE1-203ENST00000358528 SPRR1AP35321 89 aa4.14□□□□□ -1.75
CSDE1-203ENST00000358528 KRTAP7-1Q8IUC3 87 aa4.14□□□□□ -1.75
CSDE1-203ENST00000358528 KRTAP4-16G5E9R7 235 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-203ENST00000358528 TNP2Q05952 138 aa4.14□□□□□ -1.75
CSDE1-203ENST00000358528 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
CSDE1-203ENST00000358528 SRRM2Q9UQ35 2752 aaKnown RBP4.13□□□□□ -1.75
CSDE1-203ENST00000358528 SPAG11AQ6PDA7 123 aa4.13□□□□□ -1.75
CSDE1-203ENST00000358528 PRR15Q8IV56 129 aa4.13□□□□□ -1.75
CSDE1-203ENST00000358528 IGLV5-37A0A075B6J1 123 aa4.12□□□□□ -1.75
CSDE1-203ENST00000358528 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
CSDE1-203ENST00000358528 ANK3Q12955 4377 aaKnown RBP4.12□□□□□ -1.75
CSDE1-203ENST00000358528 A8MWP4 228 aa4.12□□□□□ -1.75
CSDE1-203ENST00000358528 SEC61GP60059 68 aa4.12□□□□□ -1.75
CSDE1-203ENST00000358528 RETNLBQ9BQ08 111 aa4.12□□□□□ -1.75
CSDE1-203ENST00000358528 TENM2Q9NT68 2774 aa4.11□□□□□ -1.75
CSDE1-203ENST00000358528 KRTAP1-5Q9BYS1 174 aa4.11□□□□□ -1.75
CSDE1-203ENST00000358528 K7EIL1 84 aa4.11□□□□□ -1.75
CSDE1-203ENST00000358528 MOBPQ13875 183 aa4.11□□□□□ -1.75
CSDE1-203ENST00000358528 CNBPP62633 177 aaKnown RBP4.1□□□□□ -1.75
CSDE1-203ENST00000358528 COA5Q86WW8 74 aa4.1□□□□□ -1.75
CSDE1-203ENST00000358528 CIRBP-AS1Q8TBR5 109 aa4.09□□□□□ -1.75
CSDE1-203ENST00000358528 Q1T7F1 81 aa4.09□□□□□ -1.75
CSDE1-203ENST00000358528 A8MU10 97 aa4.09□□□□□ -1.76
CSDE1-203ENST00000358528 LIMD2Q9BT23 127 aa4.09□□□□□ -1.76
CSDE1-203ENST00000358528 KRTAP11-1Q8IUC1 163 aa4.08□□□□□ -1.76
CSDE1-203ENST00000358528 ZCCHC13Q8WW36 166 aaKnown RBP4.08□□□□□ -1.76
CSDE1-203ENST00000358528 CYP4F30PQ9H0H9 118 aa4.07□□□□□ -1.76
CSDE1-203ENST00000358528 MDFIQ99750 246 aa4.07□□□□□ -1.76
CSDE1-203ENST00000358528 H3BPC8 53 aa4.05□□□□□ -1.76
CSDE1-203ENST00000358528 C9orf163Q8N9P6 203 aa4.05□□□□□ -1.76
CSDE1-203ENST00000358528 Q8N9P0 234 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-203ENST00000358528 C8orf17Q9NRJ1 99 aa4.05□□□□□ -1.76
CSDE1-203ENST00000358528 PANO1I0J062 215 aa4.05□□□□□ -1.76
CSDE1-203ENST00000358528 Q5VV11 94 aa4.05□□□□□ -1.76
CSDE1-203ENST00000358528 NBDYA0A0U1RRE5 68 aa4.04□□□□□ -1.76
CSDE1-203ENST00000358528 LINC00472Q9H8W2 130 aa4.04□□□□□ -1.76
CSDE1-203ENST00000358528 CSMD3Q7Z407 3707 aa4.04□□□□□ -1.76
CSDE1-203ENST00000358528 MMP24-AS1A0A0U1RRL7 71 aa4.04□□□□□ -1.76
CSDE1-203ENST00000358528 LCE6AA0A183 80 aa4.04□□□□□ -1.76
CSDE1-203ENST00000358528 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-203ENST00000358528 ZNF706Q9Y5V0 76 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-203ENST00000358528 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-203ENST00000358528 COL7A1Q02388 2944 aa4.03□□□□□ -1.76
CSDE1-203ENST00000358528 TP53AIP1Q9HCN2 124 aa4.03□□□□□ -1.76
CSDE1-203ENST00000358528 SPANXA2-OT1Q8N9U9 137 aa4.02□□□□□ -1.77
CSDE1-203ENST00000358528 MRPL34Q9BQ48 92 aaKnown RBP4.02□□□□□ -1.77
CSDE1-203ENST00000358528 IGLV8-61A0A075B6I0 122 aa4.02□□□□□ -1.77
CSDE1-203ENST00000358528 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
CSDE1-203ENST00000358528 A0A1B0GVX0 72 aa4.01□□□□□ -1.77
CSDE1-203ENST00000358528 CD164Q04900 197 aa4.01□□□□□ -1.77
CSDE1-203ENST00000358528 APLNQ9ULZ1 77 aa4.01□□□□□ -1.77
CSDE1-203ENST00000358528 LOC101927531A0A1B0GV80 90 aa4.01□□□□□ -1.77
CSDE1-203ENST00000358528 PSORS1C2Q9UIG4 136 aa4.01□□□□□ -1.77
CSDE1-203ENST00000358528 IGLV5-52A0A0A0MRZ9 124 aa4□□□□□ -1.77
CSDE1-203ENST00000358528 RTL8CO15255 209 aa4□□□□□ -1.77
CSDE1-203ENST00000358528 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
CSDE1-203ENST00000358528 LY6G6CO95867 125 aa4□□□□□ -1.77
CSDE1-203ENST00000358528 NUPR2A6NF83 97 aa3.99□□□□□ -1.77
CSDE1-203ENST00000358528 A0A087X002 238 aa3.98□□□□□ -1.77
CSDE1-203ENST00000358528 NOTCH2NLQ7Z3S9 236 aa3.98□□□□□ -1.77
CSDE1-203ENST00000358528 SPINK1P00995 79 aa3.98□□□□□ -1.77
CSDE1-203ENST00000358528 SPRR1BP22528 89 aa3.98□□□□□ -1.77
CSDE1-203ENST00000358528 IGKV2D-30A0A075B6S6 120 aa3.98□□□□□ -1.77
CSDE1-203ENST00000358528 IGKV2-30P06310 120 aa3.98□□□□□ -1.77
CSDE1-203ENST00000358528 A0A087WTM6 91 aa3.97□□□□□ -1.77
CSDE1-203ENST00000358528 LCE2BO14633 110 aa3.97□□□□□ -1.77
CSDE1-203ENST00000358528 HRES1P13985 223 aa3.96□□□□□ -1.77
CSDE1-203ENST00000358528 ZNF861PO60384 105 aa3.96□□□□□ -1.78
CSDE1-203ENST00000358528 SPINK7P58062 85 aa3.96□□□□□ -1.78
CSDE1-203ENST00000358528 ATP11AUNQ6ZP68 121 aa3.96□□□□□ -1.78
CSDE1-203ENST00000358528 LCA10Q71F78 164 aa3.96□□□□□ -1.78
CSDE1-203ENST00000358528 SPACA4Q8TDM5 124 aa3.95□□□□□ -1.78
CSDE1-203ENST00000358528 ACYP2P14621 99 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms