RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 SERTAD4-AS1Q5TG53 156 aa6.51□□□□□ -1.37
RNF40-202ENST00000357890 FAM168BA1KXE4 195 aa6.5□□□□□ -1.37
RNF40-202ENST00000357890 UBE2DNLQ8IWF7 75 aa6.5□□□□□ -1.37
RNF40-202ENST00000357890 LINC00476Q8WZB0 136 aa6.5□□□□□ -1.37
RNF40-202ENST00000357890 Q6ZRX8 168 aa6.48□□□□□ -1.37
RNF40-202ENST00000357890 COA5Q86WW8 74 aa6.47□□□□□ -1.37
RNF40-202ENST00000357890 DSCR10P59022 87 aa6.46□□□□□ -1.37
RNF40-202ENST00000357890 KRTAP10-11P60412 298 aa6.46□□□□□ -1.37
RNF40-202ENST00000357890 C16orf90A8MZG2 172 aa6.46□□□□□ -1.38
RNF40-202ENST00000357890 Q5VV11 94 aa6.46□□□□□ -1.38
RNF40-202ENST00000357890 Q9BRP9 147 aa6.45□□□□□ -1.38
RNF40-202ENST00000357890 REG3GQ6UW15 175 aa6.44□□□□□ -1.38
RNF40-202ENST00000357890 KCNQ1DNQ9H478 68 aa6.44□□□□□ -1.38
RNF40-202ENST00000357890 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
RNF40-202ENST00000357890 IGLV9-49A0A0B4J1Y8 123 aa6.43□□□□□ -1.38
RNF40-202ENST00000357890 DNAH10OSP0CZ25 163 aa6.42□□□□□ -1.38
RNF40-202ENST00000357890 SPINK6Q6UWN8 80 aa6.42□□□□□ -1.38
RNF40-202ENST00000357890 Q8N9P0 234 aaPredicted RBP6.42□□□□□ -1.38
RNF40-202ENST00000357890 LOC101927531A0A1B0GV80 90 aa6.42□□□□□ -1.38
RNF40-202ENST00000357890 KRTAP26-1Q6PEX3 210 aa6.41□□□□□ -1.38
RNF40-202ENST00000357890 OTOGQ6ZRI0 2925 aa6.41□□□□□ -1.38
RNF40-202ENST00000357890 IGHV6-1A0A0B4J1U7 121 aa6.41□□□□□ -1.38
RNF40-202ENST00000357890 CASC10Q5T4H9 136 aa6.41□□□□□ -1.38
RNF40-202ENST00000357890 PKD1L1Q8TDX9 2849 aa6.41□□□□□ -1.38
RNF40-202ENST00000357890 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
RNF40-202ENST00000357890 IGFL1Q6UW32 110 aa6.4□□□□□ -1.38
RNF40-202ENST00000357890 CYP4F30PQ9H0H9 118 aa6.4□□□□□ -1.38
RNF40-202ENST00000357890 LINC00588Q9Y4M8 146 aa6.4□□□□□ -1.39
RNF40-202ENST00000357890 C7orf65Q6ZTY9 151 aa6.4□□□□□ -1.39
RNF40-202ENST00000357890 ANK3Q12955 4377 aaKnown RBP6.4□□□□□ -1.39
RNF40-202ENST00000357890 IGLV1-50A0A075B6I6 118 aa6.39□□□□□ -1.39
RNF40-202ENST00000357890 TENM3Q9P273 2699 aa6.39□□□□□ -1.39
RNF40-202ENST00000357890 MDFIQ99750 246 aa6.38□□□□□ -1.39
RNF40-202ENST00000357890 A0A1B0GW54 56 aa6.38□□□□□ -1.39
RNF40-202ENST00000357890 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
RNF40-202ENST00000357890 TRRAPQ9Y4A5 3859 aa6.36□□□□□ -1.39
RNF40-202ENST00000357890 TLX1NBP0CAT3 122 aa6.36□□□□□ -1.39
RNF40-202ENST00000357890 RETNLBQ9BQ08 111 aa6.36□□□□□ -1.39
RNF40-202ENST00000357890 PLA2G2DQ9UNK4 145 aa6.35□□□□□ -1.39
RNF40-202ENST00000357890 FBN1P35555 2871 aaKnown RBP6.34□□□□□ -1.39
RNF40-202ENST00000357890 C4orf48Q5BLP8 95 aa6.34□□□□□ -1.39
RNF40-202ENST00000357890 LCA10Q71F78 164 aa6.34□□□□□ -1.39
RNF40-202ENST00000357890 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
RNF40-202ENST00000357890 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
RNF40-202ENST00000357890 H3BPC8 53 aa6.32□□□□□ -1.4
RNF40-202ENST00000357890 A8MWP4 228 aa6.31□□□□□ -1.4
RNF40-202ENST00000357890 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
RNF40-202ENST00000357890 CHTF8P0CG12 524 aa6.31□□□□□ -1.4
RNF40-202ENST00000357890 SPRR4Q96PI1 79 aa6.31□□□□□ -1.4
RNF40-202ENST00000357890 PRR26Q8N8Z3 221 aa6.31□□□□□ -1.4
RNF40-202ENST00000357890 STAB2Q8WWQ8 2551 aa6.31□□□□□ -1.4
RNF40-202ENST00000357890 SPINK7P58062 85 aa6.31□□□□□ -1.4
RNF40-202ENST00000357890 Q75L30 129 aa6.31□□□□□ -1.4
RNF40-202ENST00000357890 SPANXA2-OT1Q8N9U9 137 aa6.31□□□□□ -1.4
RNF40-202ENST00000357890 IGLV8-61A0A075B6I0 122 aa6.3□□□□□ -1.4
RNF40-202ENST00000357890 IGLV5-37A0A075B6J1 123 aa6.3□□□□□ -1.4
RNF40-202ENST00000357890 MOBPQ13875 183 aa6.29□□□□□ -1.4
RNF40-202ENST00000357890 PHF5AQ7RTV0 110 aaKnown RBP6.29□□□□□ -1.4
RNF40-202ENST00000357890 H3BS24 57 aa6.28□□□□□ -1.4
RNF40-202ENST00000357890 A0A1B0GU69 56 aa6.27□□□□□ -1.41
RNF40-202ENST00000357890 SPRR1AP35321 89 aa6.27□□□□□ -1.41
RNF40-202ENST00000357890 K7EIL1 84 aa6.26□□□□□ -1.41
RNF40-202ENST00000357890 CNBPP62633 177 aaKnown RBP6.26□□□□□ -1.41
RNF40-202ENST00000357890 LINC00313P59037 77 aa6.26□□□□□ -1.41
RNF40-202ENST00000357890 C8orf87E5RJ46 101 aa6.25□□□□□ -1.41
RNF40-202ENST00000357890 SPINK1P00995 79 aa6.25□□□□□ -1.41
RNF40-202ENST00000357890 CSMD3Q7Z407 3707 aa6.24□□□□□ -1.41
RNF40-202ENST00000357890 KRTAP4-16G5E9R7 235 aaPredicted RBP6.23□□□□□ -1.41
RNF40-202ENST00000357890 TP53AIP1Q9HCN2 124 aa6.23□□□□□ -1.41
RNF40-202ENST00000357890 TNP2Q05952 138 aa6.23□□□□□ -1.41
RNF40-202ENST00000357890 IGLV7-46A0A075B6I9 117 aa6.22□□□□□ -1.41
RNF40-202ENST00000357890 LCE6AA0A183 80 aa6.22□□□□□ -1.41
RNF40-202ENST00000357890 A6NN06 94 aa6.21□□□□□ -1.42
RNF40-202ENST00000357890 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
RNF40-202ENST00000357890 ACYP2P14621 99 aa6.19□□□□□ -1.42
RNF40-202ENST00000357890 KRTAP21-3Q3LHN1 58 aa6.19□□□□□ -1.42
RNF40-202ENST00000357890 ADM2Q7Z4H4 148 aa6.19□□□□□ -1.42
RNF40-202ENST00000357890 C8orf17Q9NRJ1 99 aa6.19□□□□□ -1.42
RNF40-202ENST00000357890 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
RNF40-202ENST00000357890 HRES1P13985 223 aa6.18□□□□□ -1.42
RNF40-202ENST00000357890 CIRBP-AS1Q8TBR5 109 aa6.18□□□□□ -1.42
RNF40-202ENST00000357890 LINC01554Q52M75 96 aa6.18□□□□□ -1.42
RNF40-202ENST00000357890 KRTAP1-5Q9BYS1 174 aa6.17□□□□□ -1.42
RNF40-202ENST00000357890 MMP24-AS1A0A0U1RRL7 71 aa6.17□□□□□ -1.42
RNF40-202ENST00000357890 MRPL34Q9BQ48 92 aaKnown RBP6.17□□□□□ -1.42
RNF40-202ENST00000357890 ANK2Q01484 3957 aa6.16□□□□□ -1.42
RNF40-202ENST00000357890 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
RNF40-202ENST00000357890 KRTAP29-1A8MX34 341 aaPredicted RBP6.16□□□□□ -1.42
RNF40-202ENST00000357890 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.43
RNF40-202ENST00000357890 IGKV2-30P06310 120 aa6.15□□□□□ -1.43
RNF40-202ENST00000357890 SRRM2Q9UQ35 2752 aaKnown RBP6.15□□□□□ -1.43
RNF40-202ENST00000357890 NUPR2A6NF83 97 aa6.15□□□□□ -1.43
RNF40-202ENST00000357890 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.43
RNF40-202ENST00000357890 C9orf163Q8N9P6 203 aa6.15□□□□□ -1.43
RNF40-202ENST00000357890 TENM2Q9NT68 2774 aa6.14□□□□□ -1.43
RNF40-202ENST00000357890 APLNQ9ULZ1 77 aa6.14□□□□□ -1.43
RNF40-202ENST00000357890 NBDYA0A0U1RRE5 68 aa6.13□□□□□ -1.43
RNF40-202ENST00000357890 LINC00472Q9H8W2 130 aa6.12□□□□□ -1.43
RNF40-202ENST00000357890 FLG2Q5D862 2391 aaPredicted RBP6.12□□□□□ -1.43
RNF40-202ENST00000357890 UQCR11O14957 56 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms