RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 A0A087WSZ3 146 aa11.11□□□□□ -0.63
RTN4-204ENST00000357732 C1orf64Q8NEQ6 169 aa11.11□□□□□ -0.63
RTN4-204ENST00000357732 H3BPC8 53 aa11.1□□□□□ -0.63
RTN4-204ENST00000357732 PRLHP81277 87 aa11.1□□□□□ -0.63
RTN4-204ENST00000357732 Q1T7F1 81 aa11.1□□□□□ -0.63
RTN4-204ENST00000357732 C14orf177Q52M58 125 aa11.1□□□□□ -0.63
RTN4-204ENST00000357732 K7EIL1 84 aa11.1□□□□□ -0.63
RTN4-204ENST00000357732 UBE2AP49459 152 aa11.09□□□□□ -0.63
RTN4-204ENST00000357732 A0A1W2PNN7 141 aa11.09□□□□□ -0.63
RTN4-204ENST00000357732 PKIGQ9Y2B9 76 aa11.09□□□□□ -0.63
RTN4-204ENST00000357732 KRTAP29-1A8MX34 341 aaPredicted RBP11.08□□□□□ -0.64
RTN4-204ENST00000357732 BRK1Q8WUW1 75 aa11.08□□□□□ -0.64
RTN4-204ENST00000357732 NBEAL1Q6ZS30 2694 aa11.06□□□□□ -0.64
RTN4-204ENST00000357732 IGKV2-24A0A0C4DH68 120 aa11.06□□□□□ -0.64
RTN4-204ENST00000357732 TRAV22A0A0B4J277 110 aa11.04□□□□□ -0.64
RTN4-204ENST00000357732 LYSTQ99698 3801 aa11.04□□□□□ -0.64
RTN4-204ENST00000357732 WFDC13Q8IUB5 93 aa11.04□□□□□ -0.64
RTN4-204ENST00000357732 KRTAP1-5Q9BYS1 174 aa11.04□□□□□ -0.64
RTN4-204ENST00000357732 PRR15Q8IV56 129 aa11.03□□□□□ -0.64
RTN4-204ENST00000357732 SPANXA2-OT1Q8N9U9 137 aa11.03□□□□□ -0.64
RTN4-204ENST00000357732 A0A0G2JQZ4 141 aa11.03□□□□□ -0.64
RTN4-204ENST00000357732 DNAH10Q8IVF4 4471 aa11.03□□□□□ -0.64
RTN4-204ENST00000357732 A8MWP4 228 aa11.02□□□□□ -0.65
RTN4-204ENST00000357732 DEFB116Q30KQ4 102 aa11.01□□□□□ -0.65
RTN4-204ENST00000357732 CASC2Q6XLA1 102 aa11.01□□□□□ -0.65
RTN4-204ENST00000357732 LINC00472Q9H8W2 130 aa11□□□□□ -0.65
RTN4-204ENST00000357732 V9GYY9 64 aa11□□□□□ -0.65
RTN4-204ENST00000357732 COL6A5A8TX70 2615 aa10.99□□□□□ -0.65
RTN4-204ENST00000357732 B9D2Q9BPU9 175 aa10.98□□□□□ -0.65
RTN4-204ENST00000357732 LINC00208Q96KT6 92 aa10.97□□□□□ -0.65
RTN4-204ENST00000357732 PHF5AQ7RTV0 110 aaKnown RBP10.96□□□□□ -0.65
RTN4-204ENST00000357732 H0Y9P7 68 aa10.96□□□□□ -0.66
RTN4-204ENST00000357732 RPL37AP61513 92 aaKnown RBP10.95□□□□□ -0.66
RTN4-204ENST00000357732 C9orf163Q8N9P6 203 aa10.95□□□□□ -0.66
RTN4-204ENST00000357732 UBE2DNLQ8IWF7 75 aa10.94□□□□□ -0.66
RTN4-204ENST00000357732 DNAH9Q9NYC9 4486 aa10.93□□□□□ -0.66
RTN4-204ENST00000357732 KRTAP11-1Q8IUC1 163 aa10.92□□□□□ -0.66
RTN4-204ENST00000357732 LRCOL1A6NCL2 159 aa10.9□□□□□ -0.66
RTN4-204ENST00000357732 APLNQ9ULZ1 77 aa10.9□□□□□ -0.66
RTN4-204ENST00000357732 CHTF8P0CG12 524 aa10.9□□□□□ -0.66
RTN4-204ENST00000357732 COL7A1Q02388 2944 aa10.9□□□□□ -0.67
RTN4-204ENST00000357732 KRTAP13-1Q8IUC0 172 aa10.89□□□□□ -0.67
RTN4-204ENST00000357732 PRR4Q16378 134 aa10.88□□□□□ -0.67
RTN4-204ENST00000357732 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
RTN4-204ENST00000357732 STAB2Q8WWQ8 2551 aa10.87□□□□□ -0.67
RTN4-204ENST00000357732 MMP24-AS1A0A0U1RRL7 71 aa10.87□□□□□ -0.67
RTN4-204ENST00000357732 MGAM2Q2M2H8 2515 aa10.86□□□□□ -0.67
RTN4-204ENST00000357732 TP53AIP1Q9HCN2 124 aa10.85□□□□□ -0.67
RTN4-204ENST00000357732 DNAH7Q8WXX0 4024 aa10.84□□□□□ -0.67
RTN4-204ENST00000357732 MOBPQ13875 183 aa10.83□□□□□ -0.68
RTN4-204ENST00000357732 ASB16-AS1Q495Z4 193 aa10.83□□□□□ -0.68
RTN4-204ENST00000357732 LIMD2Q9BT23 127 aa10.82□□□□□ -0.68
RTN4-204ENST00000357732 PSPHP1O15172 72 aa10.81□□□□□ -0.68
RTN4-204ENST00000357732 LINC00483Q53H64 154 aa10.8□□□□□ -0.68
RTN4-204ENST00000357732 DYNC2H1Q8NCM8 4307 aaKnown RBP10.79□□□□□ -0.68
RTN4-204ENST00000357732 CSMD3Q7Z407 3707 aa10.79□□□□□ -0.68
RTN4-204ENST00000357732 SRRM2Q9UQ35 2752 aaKnown RBP10.79□□□□□ -0.68
RTN4-204ENST00000357732 IGLV7-46A0A075B6I9 117 aa10.79□□□□□ -0.68
RTN4-204ENST00000357732 NBDYA0A0U1RRE5 68 aa10.79□□□□□ -0.68
RTN4-204ENST00000357732 Q96NJ1 140 aa10.78□□□□□ -0.68
RTN4-204ENST00000357732 ZNF706Q9Y5V0 76 aaPredicted RBP10.77□□□□□ -0.69
RTN4-204ENST00000357732 Q6ZRN7 208 aaPredicted RBP10.76□□□□□ -0.69
RTN4-204ENST00000357732 Q8N9P0 234 aaPredicted RBP10.76□□□□□ -0.69
RTN4-204ENST00000357732 TENM2Q9NT68 2774 aa10.76□□□□□ -0.69
RTN4-204ENST00000357732 SPACA4Q8TDM5 124 aa10.75□□□□□ -0.69
RTN4-204ENST00000357732 A8MUN3 132 aa10.75□□□□□ -0.69
RTN4-204ENST00000357732 PANO1I0J062 215 aa10.75□□□□□ -0.69
RTN4-204ENST00000357732 Q6ZR54 194 aa10.74□□□□□ -0.69
RTN4-204ENST00000357732 Q5VV11 94 aa10.74□□□□□ -0.69
RTN4-204ENST00000357732 PLECQ15149 4684 aaKnown RBP10.73□□□□□ -0.69
RTN4-204ENST00000357732 C8orf17Q9NRJ1 99 aa10.72□□□□□ -0.69
RTN4-204ENST00000357732 NUPR2A6NF83 97 aa10.71□□□□□ -0.69
RTN4-204ENST00000357732 IGLV9-49A0A0B4J1Y8 123 aa10.7□□□□□ -0.7
RTN4-204ENST00000357732 COA5Q86WW8 74 aa10.69□□□□□ -0.7
RTN4-204ENST00000357732 A0A1B0GVX0 72 aa10.69□□□□□ -0.7
RTN4-204ENST00000357732 MDFIQ99750 246 aa10.68□□□□□ -0.7
RTN4-204ENST00000357732 LOC101927531A0A1B0GV80 90 aa10.67□□□□□ -0.7
RTN4-204ENST00000357732 WWC2-AS2Q96NR7 200 aa10.66□□□□□ -0.7
RTN4-204ENST00000357732 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.66□□□□□ -0.7
RTN4-204ENST00000357732 CDK2AP2O75956 126 aa10.66□□□□□ -0.7
RTN4-204ENST00000357732 Q75L30 129 aa10.64□□□□□ -0.71
RTN4-204ENST00000357732 MRPL34Q9BQ48 92 aaKnown RBP10.63□□□□□ -0.71
RTN4-204ENST00000357732 PRR15LQ9BU68 103 aa10.63□□□□□ -0.71
RTN4-204ENST00000357732 CHKB-CPT1BH3BT56 60 aa10.62□□□□□ -0.71
RTN4-204ENST00000357732 PMAIP1Q13794 54 aa10.62□□□□□ -0.71
RTN4-204ENST00000357732 IGLV5-52A0A0A0MRZ9 124 aa10.62□□□□□ -0.71
RTN4-204ENST00000357732 CD164Q04900 197 aa10.62□□□□□ -0.71
RTN4-204ENST00000357732 IGHV6-1A0A0B4J1U7 121 aa10.6□□□□□ -0.71
RTN4-204ENST00000357732 A0A087WTM6 91 aa10.6□□□□□ -0.71
RTN4-204ENST00000357732 PCOTHQ58A44 107 aa10.59□□□□□ -0.71
RTN4-204ENST00000357732 ZNF861PO60384 105 aa10.59□□□□□ -0.71
RTN4-204ENST00000357732 PLAC8Q9NZF1 115 aa10.58□□□□□ -0.72
RTN4-204ENST00000357732 PSORS1C2Q9UIG4 136 aa10.58□□□□□ -0.72
RTN4-204ENST00000357732 NDUFS5O43920 106 aa10.57□□□□□ -0.72
RTN4-204ENST00000357732 STARD9Q9P2P6 4700 aa10.57□□□□□ -0.72
RTN4-204ENST00000357732 LINC01558Q9Y6Z2 57 aa10.56□□□□□ -0.72
RTN4-204ENST00000357732 RTL8CO15255 209 aa10.53□□□□□ -0.72
RTN4-204ENST00000357732 VPS13DQ5THJ4 4388 aa10.53□□□□□ -0.72
RTN4-204ENST00000357732 HECTD4Q9Y4D8 3996 aa10.53□□□□□ -0.72
RTN4-204ENST00000357732 ATP11AUNQ6ZP68 121 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms