RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 SERTAD4-AS1Q5TG53 156 aa6.85□□□□□ -1.31
CAPN3-205ENST00000357568 MGAM2Q2M2H8 2515 aa6.85□□□□□ -1.31
CAPN3-205ENST00000357568 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
CAPN3-205ENST00000357568 K7EQZ3 153 aa6.84□□□□□ -1.31
CAPN3-205ENST00000357568 MP68P56378 58 aa6.83□□□□□ -1.32
CAPN3-205ENST00000357568 PSPHP1O15172 72 aa6.83□□□□□ -1.32
CAPN3-205ENST00000357568 DNAH9Q9NYC9 4486 aa6.83□□□□□ -1.32
CAPN3-205ENST00000357568 IGLV8-61A0A075B6I0 122 aa6.82□□□□□ -1.32
CAPN3-205ENST00000357568 A8MU10 97 aa6.81□□□□□ -1.32
CAPN3-205ENST00000357568 ST20-AS1Q8NBB2 130 aa6.8□□□□□ -1.32
CAPN3-205ENST00000357568 KTN1-AS1Q86SY8 53 aa6.8□□□□□ -1.32
CAPN3-205ENST00000357568 LIMD2Q9BT23 127 aa6.8□□□□□ -1.32
CAPN3-205ENST00000357568 HUWE1Q7Z6Z7 4374 aaKnown RBP6.79□□□□□ -1.32
CAPN3-205ENST00000357568 RPL37AP8A6NKH3 93 aa6.79□□□□□ -1.32
CAPN3-205ENST00000357568 LINC00588Q9Y4M8 146 aa6.79□□□□□ -1.32
CAPN3-205ENST00000357568 IGKV2D-24A0A075B6R9 120 aa6.78□□□□□ -1.32
CAPN3-205ENST00000357568 KRTAP29-1A8MX34 341 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-205ENST00000357568 UBE2BP63146 152 aa6.78□□□□□ -1.32
CAPN3-205ENST00000357568 LINC00476Q8WZB0 136 aa6.78□□□□□ -1.32
CAPN3-205ENST00000357568 NBEAL1Q6ZS30 2694 aa6.78□□□□□ -1.32
CAPN3-205ENST00000357568 DNAH10OSP0CZ25 163 aa6.77□□□□□ -1.33
CAPN3-205ENST00000357568 NOTCH1P46531 2555 aa6.77□□□□□ -1.33
CAPN3-205ENST00000357568 UBE2AP49459 152 aa6.76□□□□□ -1.33
CAPN3-205ENST00000357568 Q5VV11 94 aa6.76□□□□□ -1.33
CAPN3-205ENST00000357568 FBN3Q75N90 2809 aa6.75□□□□□ -1.33
CAPN3-205ENST00000357568 PRKDCP78527 4128 aaKnown RBP6.75□□□□□ -1.33
CAPN3-205ENST00000357568 REG3GQ6UW15 175 aa6.74□□□□□ -1.33
CAPN3-205ENST00000357568 IGFL1Q6UW32 110 aa6.74□□□□□ -1.33
CAPN3-205ENST00000357568 LINC00208Q96KT6 92 aa6.74□□□□□ -1.33
CAPN3-205ENST00000357568 MEGF8Q7Z7M0 2845 aa6.74□□□□□ -1.33
CAPN3-205ENST00000357568 A8MUN3 132 aa6.74□□□□□ -1.33
CAPN3-205ENST00000357568 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
CAPN3-205ENST00000357568 Q8N9P0 234 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-205ENST00000357568 WWC2-AS2Q96NR7 200 aa6.73□□□□□ -1.33
CAPN3-205ENST00000357568 C9orf163Q8N9P6 203 aa6.72□□□□□ -1.33
CAPN3-205ENST00000357568 H0Y9P7 68 aa6.72□□□□□ -1.33
CAPN3-205ENST00000357568 LOC101927531A0A1B0GV80 90 aa6.71□□□□□ -1.34
CAPN3-205ENST00000357568 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
CAPN3-205ENST00000357568 Q75L30 129 aa6.71□□□□□ -1.34
CAPN3-205ENST00000357568 WFDC13Q8IUB5 93 aa6.7□□□□□ -1.34
CAPN3-205ENST00000357568 CASC2Q6XLA1 102 aa6.7□□□□□ -1.34
CAPN3-205ENST00000357568 SPRR1BP22528 89 aa6.69□□□□□ -1.34
CAPN3-205ENST00000357568 PRR4Q16378 134 aa6.69□□□□□ -1.34
CAPN3-205ENST00000357568 A8MWP4 228 aa6.69□□□□□ -1.34
CAPN3-205ENST00000357568 SPTSSBQ8NFR3 76 aa6.69□□□□□ -1.34
CAPN3-205ENST00000357568 A0A087WSZ3 146 aa6.68□□□□□ -1.34
CAPN3-205ENST00000357568 C16orf90A8MZG2 172 aa6.68□□□□□ -1.34
CAPN3-205ENST00000357568 C8orf87E5RJ46 101 aa6.68□□□□□ -1.34
CAPN3-205ENST00000357568 ATP11AUNQ6ZP68 121 aa6.68□□□□□ -1.34
CAPN3-205ENST00000357568 NUPR2A6NF83 97 aa6.68□□□□□ -1.34
CAPN3-205ENST00000357568 IGLV7-46A0A075B6I9 117 aa6.67□□□□□ -1.34
CAPN3-205ENST00000357568 NDUFS5O43920 106 aa6.67□□□□□ -1.34
CAPN3-205ENST00000357568 CNBPP62633 177 aaKnown RBP6.67□□□□□ -1.34
CAPN3-205ENST00000357568 DEFB131BA0A096LNP1 70 aa6.66□□□□□ -1.34
CAPN3-205ENST00000357568 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
CAPN3-205ENST00000357568 H0Y9J4 135 aa6.66□□□□□ -1.34
CAPN3-205ENST00000357568 LINC00472Q9H8W2 130 aa6.66□□□□□ -1.34
CAPN3-205ENST00000357568 PHF5AQ7RTV0 110 aaKnown RBP6.65□□□□□ -1.34
CAPN3-205ENST00000357568 A0A0A0MQY5 61 aa6.65□□□□□ -1.35
CAPN3-205ENST00000357568 PRR15LQ9BU68 103 aa6.64□□□□□ -1.35
CAPN3-205ENST00000357568 NBEAL2Q6ZNJ1 2754 aa6.64□□□□□ -1.35
CAPN3-205ENST00000357568 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
CAPN3-205ENST00000357568 DYNC2H1Q8NCM8 4307 aaKnown RBP6.63□□□□□ -1.35
CAPN3-205ENST00000357568 COA5Q86WW8 74 aa6.63□□□□□ -1.35
CAPN3-205ENST00000357568 DNAH7Q8WXX0 4024 aa6.63□□□□□ -1.35
CAPN3-205ENST00000357568 A6NN06 94 aa6.62□□□□□ -1.35
CAPN3-205ENST00000357568 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
CAPN3-205ENST00000357568 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
CAPN3-205ENST00000357568 DEFB116Q30KQ4 102 aa6.61□□□□□ -1.35
CAPN3-205ENST00000357568 ASB16-AS1Q495Z4 193 aa6.61□□□□□ -1.35
CAPN3-205ENST00000357568 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
CAPN3-205ENST00000357568 RPL37AP61513 92 aaKnown RBP6.61□□□□□ -1.35
CAPN3-205ENST00000357568 COL7A1Q02388 2944 aa6.6□□□□□ -1.35
CAPN3-205ENST00000357568 TENM3Q9P273 2699 aa6.6□□□□□ -1.35
CAPN3-205ENST00000357568 MMP24-AS1A0A0U1RRL7 71 aa6.6□□□□□ -1.35
CAPN3-205ENST00000357568 CASC10Q5T4H9 136 aa6.6□□□□□ -1.35
CAPN3-205ENST00000357568 LCA10Q71F78 164 aa6.6□□□□□ -1.35
CAPN3-205ENST00000357568 APLNQ9ULZ1 77 aa6.6□□□□□ -1.35
CAPN3-205ENST00000357568 MOBPQ13875 183 aa6.59□□□□□ -1.35
CAPN3-205ENST00000357568 A0A0G2JQZ4 141 aa6.58□□□□□ -1.36
CAPN3-205ENST00000357568 A0A1W2PNN7 141 aa6.58□□□□□ -1.36
CAPN3-205ENST00000357568 PRLHP81277 87 aa6.58□□□□□ -1.36
CAPN3-205ENST00000357568 Q6ZR54 194 aa6.58□□□□□ -1.36
CAPN3-205ENST00000357568 C7orf65Q6ZTY9 151 aa6.57□□□□□ -1.36
CAPN3-205ENST00000357568 A6NED7 52 aa6.57□□□□□ -1.36
CAPN3-205ENST00000357568 LCE2BO14633 110 aa6.55□□□□□ -1.36
CAPN3-205ENST00000357568 A0A096LNI7 61 aa6.55□□□□□ -1.36
CAPN3-205ENST00000357568 DNAH1Q9P2D7 4330 aa6.54□□□□□ -1.36
CAPN3-205ENST00000357568 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
CAPN3-205ENST00000357568 PRR26Q8N8Z3 221 aa6.52□□□□□ -1.37
CAPN3-205ENST00000357568 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
CAPN3-205ENST00000357568 C14orf177Q52M58 125 aa6.52□□□□□ -1.37
CAPN3-205ENST00000357568 STARD9Q9P2P6 4700 aa6.51□□□□□ -1.37
CAPN3-205ENST00000357568 STAB2Q8WWQ8 2551 aa6.5□□□□□ -1.37
CAPN3-205ENST00000357568 UBE2DNLQ8IWF7 75 aa6.5□□□□□ -1.37
CAPN3-205ENST00000357568 Q96NJ1 140 aa6.5□□□□□ -1.37
CAPN3-205ENST00000357568 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
CAPN3-205ENST00000357568 PLECQ15149 4684 aaKnown RBP6.49□□□□□ -1.37
CAPN3-205ENST00000357568 IGKV2-24A0A0C4DH68 120 aa6.49□□□□□ -1.37
CAPN3-205ENST00000357568 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms