RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 KRTAP26-1Q6PEX3 210 aa7.77□□□□□ -1.17
SMC4-202ENST00000357388 Q8NDZ9 215 aa7.76□□□□□ -1.17
SMC4-202ENST00000357388 MAST4O15021 2626 aa7.74□□□□□ -1.17
SMC4-202ENST00000357388 A6NN06 94 aa7.74□□□□□ -1.17
SMC4-202ENST00000357388 Q5VSD8 79 aa7.73□□□□□ -1.17
SMC4-202ENST00000357388 ATRQ13535 2644 aa7.73□□□□□ -1.17
SMC4-202ENST00000357388 KRTAP25-1Q3LHN0 102 aa7.72□□□□□ -1.17
SMC4-202ENST00000357388 LCE6AA0A183 80 aa7.7□□□□□ -1.18
SMC4-202ENST00000357388 KRTAP29-1A8MX34 341 aaPredicted RBP7.69□□□□□ -1.18
SMC4-202ENST00000357388 M0QZ58 72 aa7.68□□□□□ -1.18
SMC4-202ENST00000357388 A0A087X002 238 aa7.67□□□□□ -1.18
SMC4-202ENST00000357388 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
SMC4-202ENST00000357388 FLG2Q5D862 2391 aaPredicted RBP7.67□□□□□ -1.18
SMC4-202ENST00000357388 STAB1Q9NY15 2570 aa7.66□□□□□ -1.18
SMC4-202ENST00000357388 ADM2Q7Z4H4 148 aa7.57□□□□□ -1.2
SMC4-202ENST00000357388 PANO1I0J062 215 aa7.57□□□□□ -1.2
SMC4-202ENST00000357388 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
SMC4-202ENST00000357388 HELZ2Q9BYK8 2649 aaKnown RBP7.55□□□□□ -1.2
SMC4-202ENST00000357388 FLNAP21333 2647 aaKnown RBP7.55□□□□□ -1.2
SMC4-202ENST00000357388 KRTAP4-16G5E9R7 235 aaPredicted RBP7.54□□□□□ -1.2
SMC4-202ENST00000357388 NDUFAF8A1L188 74 aa7.51□□□□□ -1.21
SMC4-202ENST00000357388 KRTAP1-5Q9BYS1 174 aa7.5□□□□□ -1.21
SMC4-202ENST00000357388 ITPR3Q14573 2671 aa7.5□□□□□ -1.21
SMC4-202ENST00000357388 KRTAP10-2P60368 255 aa7.48□□□□□ -1.21
SMC4-202ENST00000357388 C20orf166-AS1Q96NR2 134 aa7.47□□□□□ -1.21
SMC4-202ENST00000357388 CENPFP49454 3210 aa7.45□□□□□ -1.22
SMC4-202ENST00000357388 BPTFQ12830 3046 aa7.45□□□□□ -1.22
SMC4-202ENST00000357388 RPS29P62273 56 aaKnown RBP7.43□□□□□ -1.22
SMC4-202ENST00000357388 A8MU10 97 aa7.38□□□□□ -1.23
SMC4-202ENST00000357388 NOTCH2NLQ7Z3S9 236 aa7.34□□□□□ -1.23
SMC4-202ENST00000357388 A8MUU9 505 aa7.33□□□□□ -1.24
SMC4-202ENST00000357388 KRTAP11-1Q8IUC1 163 aa7.32□□□□□ -1.24
SMC4-202ENST00000357388 NBEAL1Q6ZS30 2694 aa7.32□□□□□ -1.24
SMC4-202ENST00000357388 CFAP46Q8IYW2 2715 aa7.32□□□□□ -1.24
SMC4-202ENST00000357388 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
SMC4-202ENST00000357388 SETXQ7Z333 2677 aaKnown RBP7.29□□□□□ -1.24
SMC4-202ENST00000357388 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
SMC4-202ENST00000357388 TNP1P09430 55 aa7.27□□□□□ -1.25
SMC4-202ENST00000357388 TEP1Q99973 2627 aaKnown RBP7.25□□□□□ -1.25
SMC4-202ENST00000357388 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.25
SMC4-202ENST00000357388 STAB2Q8WWQ8 2551 aa7.21□□□□□ -1.26
SMC4-202ENST00000357388 EP400Q96L91 3159 aa7.17□□□□□ -1.26
SMC4-202ENST00000357388 TEX15Q9BXT5 2789 aa7.16□□□□□ -1.26
SMC4-202ENST00000357388 PRRC2CQ9Y520 2896 aaKnown RBP7.16□□□□□ -1.26
SMC4-202ENST00000357388 AKAP13Q12802 2813 aa7.15□□□□□ -1.26
SMC4-202ENST00000357388 COL6A5A8TX70 2615 aa7.14□□□□□ -1.27
SMC4-202ENST00000357388 UNC79Q9P2D8 2635 aa7.14□□□□□ -1.27
SMC4-202ENST00000357388 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
SMC4-202ENST00000357388 Q6ZRN7 208 aaPredicted RBP7.12□□□□□ -1.27
SMC4-202ENST00000357388 KRTAP21-3Q3LHN1 58 aa7.11□□□□□ -1.27
SMC4-202ENST00000357388 SRCAPQ6ZRS2 3230 aa7.08□□□□□ -1.28
SMC4-202ENST00000357388 CHD6Q8TD26 2715 aa7.08□□□□□ -1.28
SMC4-202ENST00000357388 NOTCH1P46531 2555 aa7.07□□□□□ -1.28
SMC4-202ENST00000357388 KRTAP7-1Q8IUC3 87 aa7.07□□□□□ -1.28
SMC4-202ENST00000357388 P0C880 135 aa7.05□□□□□ -1.28
SMC4-202ENST00000357388 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
SMC4-202ENST00000357388 CENPEQ02224 2701 aa7.04□□□□□ -1.28
SMC4-202ENST00000357388 GOLGB1Q14789 3259 aaKnown RBP6.99□□□□□ -1.29
SMC4-202ENST00000357388 BAHCC1Q9P281 2608 aa6.97□□□□□ -1.29
SMC4-202ENST00000357388 H0YAA0 97 aa6.93□□□□□ -1.3
SMC4-202ENST00000357388 GCN1Q92616 2671 aaKnown RBP6.91□□□□□ -1.3
SMC4-202ENST00000357388 NSD1Q96L73 2696 aaPredicted RBP6.9□□□□□ -1.31
SMC4-202ENST00000357388 MAP1AP78559 2803 aaPredicted RBP6.88□□□□□ -1.31
SMC4-202ENST00000357388 KRTAP10-8P60410 259 aa6.87□□□□□ -1.31
SMC4-202ENST00000357388 ZNF292O60281 2723 aa6.84□□□□□ -1.31
SMC4-202ENST00000357388 IGSF10Q6WRI0 2623 aa6.83□□□□□ -1.32
SMC4-202ENST00000357388 USP34Q70CQ2 3546 aa6.8□□□□□ -1.32
SMC4-202ENST00000357388 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
SMC4-202ENST00000357388 XP32Q5T750 250 aa6.77□□□□□ -1.32
SMC4-202ENST00000357388 UBR5O95071 2799 aaPredicted RBP6.75□□□□□ -1.33
SMC4-202ENST00000357388 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
SMC4-202ENST00000357388 CEP350Q5VT06 3117 aa6.74□□□□□ -1.33
SMC4-202ENST00000357388 ITPR2Q14571 2701 aa6.72□□□□□ -1.33
SMC4-202ENST00000357388 KRTAP10-10P60014 251 aa6.71□□□□□ -1.33
SMC4-202ENST00000357388 A0A1B0GVY2 172 aa6.71□□□□□ -1.34
SMC4-202ENST00000357388 NBEAL2Q6ZNJ1 2754 aa6.69□□□□□ -1.34
SMC4-202ENST00000357388 KMT2BQ9UMN6 2715 aaPredicted RBP6.68□□□□□ -1.34
SMC4-202ENST00000357388 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
SMC4-202ENST00000357388 PCNTO95613 3336 aa6.66□□□□□ -1.34
SMC4-202ENST00000357388 C5orf42Q9H799 3197 aa6.63□□□□□ -1.35
SMC4-202ENST00000357388 UTRNP46939 3433 aa6.61□□□□□ -1.35
SMC4-202ENST00000357388 TENM4Q6N022 2769 aa6.53□□□□□ -1.36
SMC4-202ENST00000357388 MGAQ8IWI9 3026 aa6.53□□□□□ -1.36
SMC4-202ENST00000357388 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
SMC4-202ENST00000357388 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
SMC4-202ENST00000357388 ITPR1Q14643 2758 aa6.48□□□□□ -1.37
SMC4-202ENST00000357388 HIVEP1P15822 2718 aa6.47□□□□□ -1.37
SMC4-202ENST00000357388 FRYQ5TBA9 3013 aa6.45□□□□□ -1.38
SMC4-202ENST00000357388 CHD7Q9P2D1 2997 aa6.43□□□□□ -1.38
SMC4-202ENST00000357388 A0A0C4DFX4 3053 aa6.43□□□□□ -1.38
SMC4-202ENST00000357388 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
SMC4-202ENST00000357388 DSPP15924 2871 aaKnown RBP6.41□□□□□ -1.38
SMC4-202ENST00000357388 DNAH12Q6ZR08 3092 aa6.4□□□□□ -1.39
SMC4-202ENST00000357388 APCP25054 2843 aa6.38□□□□□ -1.39
SMC4-202ENST00000357388 INE1O15225 51 aa6.37□□□□□ -1.39
SMC4-202ENST00000357388 CHD9Q3L8U1 2897 aa6.36□□□□□ -1.39
SMC4-202ENST00000357388 FLNCQ14315 2725 aa6.36□□□□□ -1.39
SMC4-202ENST00000357388 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
SMC4-202ENST00000357388 UTP20O75691 2785 aaKnown RBP6.33□□□□□ -1.4
SMC4-202ENST00000357388 XIRP2A4UGR9 3374 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms