RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 FAM229BQ4G0N7 80 aa9.85□□□□□ -0.83
TRAPPC11-202ENST00000357207 COL6A5A8TX70 2615 aa9.84□□□□□ -0.83
TRAPPC11-202ENST00000357207 IGLV7-46A0A075B6I9 117 aa9.83□□□□□ -0.84
TRAPPC11-202ENST00000357207 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
TRAPPC11-202ENST00000357207 KALRNO60229 2985 aa9.82□□□□□ -0.84
TRAPPC11-202ENST00000357207 CELSR3Q9NYQ7 3312 aa9.82□□□□□ -0.84
TRAPPC11-202ENST00000357207 SPRR1AP35321 89 aa9.81□□□□□ -0.84
TRAPPC11-202ENST00000357207 UBR5O95071 2799 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC11-202ENST00000357207 OXTP01178 125 aa9.81□□□□□ -0.84
TRAPPC11-202ENST00000357207 APLNQ9ULZ1 77 aa9.8□□□□□ -0.84
TRAPPC11-202ENST00000357207 Q8N9P0 234 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC11-202ENST00000357207 LAMA1P25391 3075 aa9.78□□□□□ -0.84
TRAPPC11-202ENST00000357207 SPINT4Q6UDR6 99 aa9.77□□□□□ -0.85
TRAPPC11-202ENST00000357207 SETXQ7Z333 2677 aaKnown RBP9.76□□□□□ -0.85
TRAPPC11-202ENST00000357207 LINC00304Q8N9R0 145 aa9.75□□□□□ -0.85
TRAPPC11-202ENST00000357207 CDH23Q9H251 3354 aa9.74□□□□□ -0.85
TRAPPC11-202ENST00000357207 Q75L30 129 aa9.74□□□□□ -0.85
TRAPPC11-202ENST00000357207 WWC2-AS2Q96NR7 200 aa9.73□□□□□ -0.85
TRAPPC11-202ENST00000357207 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
TRAPPC11-202ENST00000357207 Q8N1X5 172 aa9.69□□□□□ -0.86
TRAPPC11-202ENST00000357207 LINC01558Q9Y6Z2 57 aa9.69□□□□□ -0.86
TRAPPC11-202ENST00000357207 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
TRAPPC11-202ENST00000357207 LINC00472Q9H8W2 130 aa9.66□□□□□ -0.86
TRAPPC11-202ENST00000357207 ADGRG4Q8IZF6 3080 aa9.66□□□□□ -0.86
TRAPPC11-202ENST00000357207 VCANP13611 3396 aa9.66□□□□□ -0.86
TRAPPC11-202ENST00000357207 HRES1P13985 223 aa9.66□□□□□ -0.86
TRAPPC11-202ENST00000357207 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC11-202ENST00000357207 IGSF10Q6WRI0 2623 aa9.66□□□□□ -0.86
TRAPPC11-202ENST00000357207 KRTAP26-1Q6PEX3 210 aa9.65□□□□□ -0.86
TRAPPC11-202ENST00000357207 Q5VV11 94 aa9.65□□□□□ -0.86
TRAPPC11-202ENST00000357207 SPRR1BP22528 89 aa9.65□□□□□ -0.87
TRAPPC11-202ENST00000357207 RBM12B-AS1Q9P1G2 102 aa9.64□□□□□ -0.87
TRAPPC11-202ENST00000357207 DMXL2Q8TDJ6 3036 aa9.63□□□□□ -0.87
TRAPPC11-202ENST00000357207 ITPR1Q14643 2758 aa9.63□□□□□ -0.87
TRAPPC11-202ENST00000357207 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
TRAPPC11-202ENST00000357207 FLNCQ14315 2725 aa9.63□□□□□ -0.87
TRAPPC11-202ENST00000357207 TNP2Q05952 138 aa9.6□□□□□ -0.87
TRAPPC11-202ENST00000357207 TACC2O95359 2948 aa9.6□□□□□ -0.87
TRAPPC11-202ENST00000357207 ATMQ13315 3056 aa9.59□□□□□ -0.87
TRAPPC11-202ENST00000357207 FLG2Q5D862 2391 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC11-202ENST00000357207 STAB2Q8WWQ8 2551 aa9.59□□□□□ -0.87
TRAPPC11-202ENST00000357207 FRYLO94915 3013 aa9.58□□□□□ -0.88
TRAPPC11-202ENST00000357207 ASH1LQ9NR48 2969 aaKnown RBP9.58□□□□□ -0.88
TRAPPC11-202ENST00000357207 NSD1Q96L73 2696 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC11-202ENST00000357207 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC11-202ENST00000357207 BOD1L1Q8NFC6 3051 aa9.56□□□□□ -0.88
TRAPPC11-202ENST00000357207 DNAH14Q0VDD8 3507 aa9.55□□□□□ -0.88
TRAPPC11-202ENST00000357207 BAHCC1Q9P281 2608 aa9.54□□□□□ -0.88
TRAPPC11-202ENST00000357207 KRTAP4-16G5E9R7 235 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC11-202ENST00000357207 SPINK7P58062 85 aa9.51□□□□□ -0.89
TRAPPC11-202ENST00000357207 SZT2Q5T011 3432 aa9.51□□□□□ -0.89
TRAPPC11-202ENST00000357207 A0A0D9SG42 100 aa9.5□□□□□ -0.89
TRAPPC11-202ENST00000357207 LRBAP50851 2863 aa9.5□□□□□ -0.89
TRAPPC11-202ENST00000357207 COL12A1Q99715 3063 aa9.48□□□□□ -0.89
TRAPPC11-202ENST00000357207 A0A1B0GU33 70 aa9.48□□□□□ -0.89
TRAPPC11-202ENST00000357207 PLAC8Q9NZF1 115 aa9.48□□□□□ -0.89
TRAPPC11-202ENST00000357207 PRAC1Q96KF2 57 aa9.48□□□□□ -0.89
TRAPPC11-202ENST00000357207 KRTAP1-5Q9BYS1 174 aa9.48□□□□□ -0.89
TRAPPC11-202ENST00000357207 LINC01554Q52M75 96 aa9.48□□□□□ -0.89
TRAPPC11-202ENST00000357207 DMBT1Q9UGM3 2413 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC11-202ENST00000357207 Q5W150 140 aa9.46□□□□□ -0.9
TRAPPC11-202ENST00000357207 ZCCHC13Q8WW36 166 aaKnown RBP9.46□□□□□ -0.9
TRAPPC11-202ENST00000357207 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC11-202ENST00000357207 CFAP47Q6ZTR5 3102 aa9.41□□□□□ -0.9
TRAPPC11-202ENST00000357207 UTP20O75691 2785 aaKnown RBP9.38□□□□□ -0.91
TRAPPC11-202ENST00000357207 ITPR2Q14571 2701 aa9.38□□□□□ -0.91
TRAPPC11-202ENST00000357207 ZZEF1O43149 2961 aa9.37□□□□□ -0.91
TRAPPC11-202ENST00000357207 APCP25054 2843 aa9.37□□□□□ -0.91
TRAPPC11-202ENST00000357207 Q6ZR54 194 aa9.35□□□□□ -0.91
TRAPPC11-202ENST00000357207 COL6A3P12111 3177 aa9.35□□□□□ -0.91
TRAPPC11-202ENST00000357207 CELSR2Q9HCU4 2923 aa9.33□□□□□ -0.92
TRAPPC11-202ENST00000357207 CSAG1Q6PB30 78 aa9.31□□□□□ -0.92
TRAPPC11-202ENST00000357207 DMAC1Q96GE9 116 aa9.31□□□□□ -0.92
TRAPPC11-202ENST00000357207 NIPBLQ6KC79 2804 aaeCLIP9.3□□□□□ -0.92
TRAPPC11-202ENST00000357207 ZANQ9Y493 2812 aa9.3□□□□□ -0.92
TRAPPC11-202ENST00000357207 HIVEP1P15822 2718 aa9.3□□□□□ -0.92
TRAPPC11-202ENST00000357207 LINC00483Q53H64 154 aa9.29□□□□□ -0.92
TRAPPC11-202ENST00000357207 COX6B2Q6YFQ2 88 aa9.29□□□□□ -0.92
TRAPPC11-202ENST00000357207 LCE6AA0A183 80 aa9.28□□□□□ -0.92
TRAPPC11-202ENST00000357207 PANO1I0J062 215 aa9.26□□□□□ -0.93
TRAPPC11-202ENST00000357207 SPEGQ15772 3267 aa9.25□□□□□ -0.93
TRAPPC11-202ENST00000357207 J3QL48 77 aa9.22□□□□□ -0.93
TRAPPC11-202ENST00000357207 REV3LO60673 3130 aa9.21□□□□□ -0.94
TRAPPC11-202ENST00000357207 KRTAP7-1Q8IUC3 87 aa9.19□□□□□ -0.94
TRAPPC11-202ENST00000357207 H3BS24 57 aa9.19□□□□□ -0.94
TRAPPC11-202ENST00000357207 A0A087X002 238 aa9.18□□□□□ -0.94
TRAPPC11-202ENST00000357207 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
TRAPPC11-202ENST00000357207 KRTAP11-1Q8IUC1 163 aa9.16□□□□□ -0.94
TRAPPC11-202ENST00000357207 DCHS2Q6V1P9 2916 aa9.15□□□□□ -0.94
TRAPPC11-202ENST00000357207 EYSQ5T1H1 3165 aa9.15□□□□□ -0.95
TRAPPC11-202ENST00000357207 Q6ZSA8 131 aa9.15□□□□□ -0.95
TRAPPC11-202ENST00000357207 LUZP6Q538Z0 58 aa9.13□□□□□ -0.95
TRAPPC11-202ENST00000357207 ASB16-AS1Q495Z4 193 aa9.13□□□□□ -0.95
TRAPPC11-202ENST00000357207 KMT2BQ9UMN6 2715 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC11-202ENST00000357207 NF1P21359 2839 aa9.12□□□□□ -0.95
TRAPPC11-202ENST00000357207 SPATA8Q6RVD6 105 aa9.1□□□□□ -0.95
TRAPPC11-202ENST00000357207 A6NN06 94 aa9.09□□□□□ -0.95
TRAPPC11-202ENST00000357207 KRTAP10-1P60331 282 aa9.08□□□□□ -0.96
TRAPPC11-202ENST00000357207 KRTAP10-2P60368 255 aa9.08□□□□□ -0.96
TRAPPC11-202ENST00000357207 RPL37P61927 97 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms