RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 NDUFB1O75438 58 aa9.67□□□□□ -0.86
VAT1-201ENST00000355653 PRLHP81277 87 aa9.67□□□□□ -0.86
VAT1-201ENST00000355653 C11orf45Q8TAV5 145 aa9.67□□□□□ -0.86
VAT1-201ENST00000355653 FLNBO75369 2602 aaKnown RBP9.66□□□□□ -0.86
VAT1-201ENST00000355653 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
VAT1-201ENST00000355653 PMAIP1Q13794 54 aa9.65□□□□□ -0.86
VAT1-201ENST00000355653 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
VAT1-201ENST00000355653 B9D2Q9BPU9 175 aa9.64□□□□□ -0.87
VAT1-201ENST00000355653 A8MU10 97 aa9.62□□□□□ -0.87
VAT1-201ENST00000355653 IGKV2-24A0A0C4DH68 120 aa9.62□□□□□ -0.87
VAT1-201ENST00000355653 H0Y9P7 68 aa9.61□□□□□ -0.87
VAT1-201ENST00000355653 LINC00588Q9Y4M8 146 aa9.61□□□□□ -0.87
VAT1-201ENST00000355653 CASC2Q6XLA1 102 aa9.59□□□□□ -0.87
VAT1-201ENST00000355653 STAB1Q9NY15 2570 aa9.58□□□□□ -0.88
VAT1-201ENST00000355653 UBE2AP49459 152 aa9.58□□□□□ -0.88
VAT1-201ENST00000355653 MAST4O15021 2626 aa9.57□□□□□ -0.88
VAT1-201ENST00000355653 Q5VV11 94 aa9.56□□□□□ -0.88
VAT1-201ENST00000355653 FBN1P35555 2871 aaKnown RBP9.56□□□□□ -0.88
VAT1-201ENST00000355653 KRTAP29-1A8MX34 341 aaPredicted RBP9.56□□□□□ -0.88
VAT1-201ENST00000355653 CHKB-CPT1BH3BT56 60 aa9.55□□□□□ -0.88
VAT1-201ENST00000355653 NOTCH1P46531 2555 aa9.55□□□□□ -0.88
VAT1-201ENST00000355653 A0A096LNI7 61 aa9.54□□□□□ -0.88
VAT1-201ENST00000355653 CNBPP62633 177 aaKnown RBP9.54□□□□□ -0.88
VAT1-201ENST00000355653 PRR15LQ9BU68 103 aa9.53□□□□□ -0.88
VAT1-201ENST00000355653 DNAH1Q9P2D7 4330 aa9.53□□□□□ -0.88
VAT1-201ENST00000355653 CSMD3Q7Z407 3707 aa9.52□□□□□ -0.89
VAT1-201ENST00000355653 Q8N9P0 234 aaPredicted RBP9.52□□□□□ -0.89
VAT1-201ENST00000355653 DNAH10Q8IVF4 4471 aa9.51□□□□□ -0.89
VAT1-201ENST00000355653 IGLV8-61A0A075B6I0 122 aa9.51□□□□□ -0.89
VAT1-201ENST00000355653 H0Y9J4 135 aa9.5□□□□□ -0.89
VAT1-201ENST00000355653 SPANXA2-OT1Q8N9U9 137 aa9.5□□□□□ -0.89
VAT1-201ENST00000355653 CMYA5Q8N3K9 4069 aa9.5□□□□□ -0.89
VAT1-201ENST00000355653 CD164Q04900 197 aa9.49□□□□□ -0.89
VAT1-201ENST00000355653 A8MWP4 228 aa9.48□□□□□ -0.89
VAT1-201ENST00000355653 KRTAP24-1Q3LI83 254 aa9.48□□□□□ -0.89
VAT1-201ENST00000355653 LYSTQ99698 3801 aa9.48□□□□□ -0.89
VAT1-201ENST00000355653 COL6A5A8TX70 2615 aa9.48□□□□□ -0.89
VAT1-201ENST00000355653 SPTSSBQ8NFR3 76 aa9.47□□□□□ -0.89
VAT1-201ENST00000355653 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
VAT1-201ENST00000355653 H3BPC8 53 aa9.47□□□□□ -0.89
VAT1-201ENST00000355653 C16orf90A8MZG2 172 aa9.46□□□□□ -0.9
VAT1-201ENST00000355653 PHF5AQ7RTV0 110 aaKnown RBP9.46□□□□□ -0.9
VAT1-201ENST00000355653 KRTAP11-1Q8IUC1 163 aa9.46□□□□□ -0.9
VAT1-201ENST00000355653 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
VAT1-201ENST00000355653 CHTF8P0CG12 524 aa9.45□□□□□ -0.9
VAT1-201ENST00000355653 LINC00472Q9H8W2 130 aa9.45□□□□□ -0.9
VAT1-201ENST00000355653 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
VAT1-201ENST00000355653 C9orf163Q8N9P6 203 aa9.45□□□□□ -0.9
VAT1-201ENST00000355653 COA5Q86WW8 74 aa9.44□□□□□ -0.9
VAT1-201ENST00000355653 A6NED7 52 aa9.42□□□□□ -0.9
VAT1-201ENST00000355653 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
VAT1-201ENST00000355653 MMP24-AS1A0A0U1RRL7 71 aa9.4□□□□□ -0.9
VAT1-201ENST00000355653 TENM2Q9NT68 2774 aa9.39□□□□□ -0.91
VAT1-201ENST00000355653 KRTAP1-5Q9BYS1 174 aa9.39□□□□□ -0.91
VAT1-201ENST00000355653 DNAH3Q8TD57 4116 aa9.38□□□□□ -0.91
VAT1-201ENST00000355653 LCA10Q71F78 164 aa9.38□□□□□ -0.91
VAT1-201ENST00000355653 IGLV7-46A0A075B6I9 117 aa9.36□□□□□ -0.91
VAT1-201ENST00000355653 SPAG11AQ6PDA7 123 aa9.35□□□□□ -0.91
VAT1-201ENST00000355653 Q75L30 129 aa9.35□□□□□ -0.91
VAT1-201ENST00000355653 SPRR1BP22528 89 aa9.35□□□□□ -0.91
VAT1-201ENST00000355653 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
VAT1-201ENST00000355653 IGLV9-49A0A0B4J1Y8 123 aa9.33□□□□□ -0.92
VAT1-201ENST00000355653 NDUFS5O43920 106 aa9.33□□□□□ -0.92
VAT1-201ENST00000355653 DNAH9Q9NYC9 4486 aa9.32□□□□□ -0.92
VAT1-201ENST00000355653 LOC101927531A0A1B0GV80 90 aa9.31□□□□□ -0.92
VAT1-201ENST00000355653 KTN1-AS1Q86SY8 53 aa9.31□□□□□ -0.92
VAT1-201ENST00000355653 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
VAT1-201ENST00000355653 RBM12B-AS1Q9P1G2 102 aa9.3□□□□□ -0.92
VAT1-201ENST00000355653 IGHV6-1A0A0B4J1U7 121 aa9.28□□□□□ -0.92
VAT1-201ENST00000355653 K7EIL1 84 aa9.28□□□□□ -0.92
VAT1-201ENST00000355653 UBE2DNLQ8IWF7 75 aa9.27□□□□□ -0.93
VAT1-201ENST00000355653 STAB2Q8WWQ8 2551 aa9.26□□□□□ -0.93
VAT1-201ENST00000355653 Q96NJ1 140 aa9.26□□□□□ -0.93
VAT1-201ENST00000355653 TP53AIP1Q9HCN2 124 aa9.26□□□□□ -0.93
VAT1-201ENST00000355653 C8orf17Q9NRJ1 99 aa9.26□□□□□ -0.93
VAT1-201ENST00000355653 MGAM2Q2M2H8 2515 aa9.26□□□□□ -0.93
VAT1-201ENST00000355653 MOBPQ13875 183 aa9.25□□□□□ -0.93
VAT1-201ENST00000355653 CDC42SE1Q9NRR8 79 aa9.25□□□□□ -0.93
VAT1-201ENST00000355653 PANO1I0J062 215 aa9.24□□□□□ -0.93
VAT1-201ENST00000355653 LINC01558Q9Y6Z2 57 aa9.23□□□□□ -0.93
VAT1-201ENST00000355653 A6NN06 94 aa9.22□□□□□ -0.93
VAT1-201ENST00000355653 HRES1P13985 223 aa9.22□□□□□ -0.93
VAT1-201ENST00000355653 C14orf177Q52M58 125 aa9.21□□□□□ -0.93
VAT1-201ENST00000355653 Q6ZR54 194 aa9.21□□□□□ -0.93
VAT1-201ENST00000355653 CDK2AP2O75956 126 aa9.2□□□□□ -0.94
VAT1-201ENST00000355653 SPINK7P58062 85 aa9.2□□□□□ -0.94
VAT1-201ENST00000355653 ASB16-AS1Q495Z4 193 aa9.2□□□□□ -0.94
VAT1-201ENST00000355653 DNAH7Q8WXX0 4024 aa9.2□□□□□ -0.94
VAT1-201ENST00000355653 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
VAT1-201ENST00000355653 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
VAT1-201ENST00000355653 KRTAP13-1Q8IUC0 172 aa9.18□□□□□ -0.94
VAT1-201ENST00000355653 A0A087X002 238 aa9.18□□□□□ -0.94
VAT1-201ENST00000355653 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
VAT1-201ENST00000355653 PLAC8Q9NZF1 115 aa9.17□□□□□ -0.94
VAT1-201ENST00000355653 MRPL34Q9BQ48 92 aaKnown RBP9.16□□□□□ -0.94
VAT1-201ENST00000355653 ANAPC11Q9NYG5 84 aa9.16□□□□□ -0.94
VAT1-201ENST00000355653 PRR26Q8N8Z3 221 aa9.13□□□□□ -0.95
VAT1-201ENST00000355653 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.12□□□□□ -0.95
VAT1-201ENST00000355653 SPINK6Q6UWN8 80 aa9.11□□□□□ -0.95
VAT1-201ENST00000355653 C7orf65Q6ZTY9 151 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms