RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 FBN3Q75N90 2809 aa4.89□□□□□ -1.63
BRCA1-201ENST00000352993 IGLV1-50A0A075B6I6 118 aa4.89□□□□□ -1.63
BRCA1-201ENST00000352993 IGFL1Q6UW32 110 aa4.89□□□□□ -1.63
BRCA1-201ENST00000352993 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
BRCA1-201ENST00000352993 FLNBO75369 2602 aaKnown RBP4.88□□□□□ -1.63
BRCA1-201ENST00000352993 KRTAP10-3P60369 221 aa4.88□□□□□ -1.63
BRCA1-201ENST00000352993 PRLHP81277 87 aa4.88□□□□□ -1.63
BRCA1-201ENST00000352993 KRTAP26-1Q6PEX3 210 aa4.88□□□□□ -1.63
BRCA1-201ENST00000352993 ATP11AUNQ6ZP68 121 aa4.88□□□□□ -1.63
BRCA1-201ENST00000352993 COA5Q86WW8 74 aa4.88□□□□□ -1.63
BRCA1-201ENST00000352993 LCA10Q71F78 164 aa4.87□□□□□ -1.63
BRCA1-201ENST00000352993 NDUFS5O43920 106 aa4.87□□□□□ -1.63
BRCA1-201ENST00000352993 REG3GQ6UW15 175 aa4.87□□□□□ -1.63
BRCA1-201ENST00000352993 IGKV2-24A0A0C4DH68 120 aa4.86□□□□□ -1.63
BRCA1-201ENST00000352993 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
BRCA1-201ENST00000352993 KRTAP4-16G5E9R7 235 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-201ENST00000352993 LOC101927531A0A1B0GV80 90 aa4.84□□□□□ -1.63
BRCA1-201ENST00000352993 DNAH1Q9P2D7 4330 aa4.84□□□□□ -1.64
BRCA1-201ENST00000352993 Q75L30 129 aa4.84□□□□□ -1.64
BRCA1-201ENST00000352993 SMR3AQ99954 134 aa4.84□□□□□ -1.64
BRCA1-201ENST00000352993 VWFP04275 2813 aa4.84□□□□□ -1.64
BRCA1-201ENST00000352993 H3BPC8 53 aa4.83□□□□□ -1.64
BRCA1-201ENST00000352993 SPRR1AP35321 89 aa4.83□□□□□ -1.64
BRCA1-201ENST00000352993 CASC10Q5T4H9 136 aa4.83□□□□□ -1.64
BRCA1-201ENST00000352993 ATRQ13535 2644 aa4.83□□□□□ -1.64
BRCA1-201ENST00000352993 DEFB131BA0A096LNP1 70 aa4.82□□□□□ -1.64
BRCA1-201ENST00000352993 CNBPP62633 177 aaKnown RBP4.82□□□□□ -1.64
BRCA1-201ENST00000352993 LINC01556Q5JQF7 62 aa4.82□□□□□ -1.64
BRCA1-201ENST00000352993 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
BRCA1-201ENST00000352993 NSD1Q96L73 2696 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-201ENST00000352993 TEP1Q99973 2627 aaKnown RBP4.82□□□□□ -1.64
BRCA1-201ENST00000352993 KRTAP29-1A8MX34 341 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-201ENST00000352993 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
BRCA1-201ENST00000352993 A6NN06 94 aa4.81□□□□□ -1.64
BRCA1-201ENST00000352993 A8MWP4 228 aa4.81□□□□□ -1.64
BRCA1-201ENST00000352993 PLA2G2DQ9UNK4 145 aa4.81□□□□□ -1.64
BRCA1-201ENST00000352993 PKD1L1Q8TDX9 2849 aa4.8□□□□□ -1.64
BRCA1-201ENST00000352993 MOBPQ13875 183 aa4.8□□□□□ -1.64
BRCA1-201ENST00000352993 KRTAP7-1Q8IUC3 87 aa4.8□□□□□ -1.64
BRCA1-201ENST00000352993 FBN1P35555 2871 aaKnown RBP4.8□□□□□ -1.64
BRCA1-201ENST00000352993 TLX1NBP0CAT3 122 aa4.79□□□□□ -1.64
BRCA1-201ENST00000352993 C9orf163Q8N9P6 203 aa4.79□□□□□ -1.64
BRCA1-201ENST00000352993 SPINK7P58062 85 aa4.79□□□□□ -1.64
BRCA1-201ENST00000352993 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
BRCA1-201ENST00000352993 PHF5AQ7RTV0 110 aaKnown RBP4.78□□□□□ -1.64
BRCA1-201ENST00000352993 C11orf45Q8TAV5 145 aa4.78□□□□□ -1.64
BRCA1-201ENST00000352993 IGLV5-37A0A075B6J1 123 aa4.78□□□□□ -1.64
BRCA1-201ENST00000352993 H3BNG1 76 aa4.77□□□□□ -1.65
BRCA1-201ENST00000352993 MDFIQ99750 246 aa4.77□□□□□ -1.65
BRCA1-201ENST00000352993 OXLD1Q5BKU9 147 aa4.76□□□□□ -1.65
BRCA1-201ENST00000352993 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
BRCA1-201ENST00000352993 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
BRCA1-201ENST00000352993 CDK2AP2O75956 126 aa4.75□□□□□ -1.65
BRCA1-201ENST00000352993 TRRAPQ9Y4A5 3859 aa4.75□□□□□ -1.65
BRCA1-201ENST00000352993 IGHV6-1A0A0B4J1U7 121 aa4.75□□□□□ -1.65
BRCA1-201ENST00000352993 IGLV9-49A0A0B4J1Y8 123 aa4.74□□□□□ -1.65
BRCA1-201ENST00000352993 MMP24-AS1A0A0U1RRL7 71 aa4.74□□□□□ -1.65
BRCA1-201ENST00000352993 LINC00472Q9H8W2 130 aa4.74□□□□□ -1.65
BRCA1-201ENST00000352993 DNAH10OSP0CZ25 163 aa4.74□□□□□ -1.65
BRCA1-201ENST00000352993 LCE2DQ5TA82 110 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-201ENST00000352993 PRR26Q8N8Z3 221 aa4.73□□□□□ -1.65
BRCA1-201ENST00000352993 HRES1P13985 223 aa4.73□□□□□ -1.65
BRCA1-201ENST00000352993 IGLV8-61A0A075B6I0 122 aa4.72□□□□□ -1.65
BRCA1-201ENST00000352993 CHTF8P0CG12 524 aa4.72□□□□□ -1.65
BRCA1-201ENST00000352993 LINC00313P59037 77 aa4.72□□□□□ -1.65
BRCA1-201ENST00000352993 TP53AIP1Q9HCN2 124 aa4.72□□□□□ -1.65
BRCA1-201ENST00000352993 TENM1Q9UKZ4 2725 aa4.72□□□□□ -1.65
BRCA1-201ENST00000352993 C4orf48Q5BLP8 95 aa4.71□□□□□ -1.65
BRCA1-201ENST00000352993 INAFM1C9JVW0 142 aa4.71□□□□□ -1.66
BRCA1-201ENST00000352993 C8orf87E5RJ46 101 aa4.71□□□□□ -1.66
BRCA1-201ENST00000352993 SRRM2Q9UQ35 2752 aaKnown RBP4.71□□□□□ -1.66
BRCA1-201ENST00000352993 TENM3Q9P273 2699 aa4.71□□□□□ -1.66
BRCA1-201ENST00000352993 PRKDCP78527 4128 aaKnown RBP4.7□□□□□ -1.66
BRCA1-201ENST00000352993 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
BRCA1-201ENST00000352993 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
BRCA1-201ENST00000352993 C8orf17Q9NRJ1 99 aa4.69□□□□□ -1.66
BRCA1-201ENST00000352993 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
BRCA1-201ENST00000352993 SPINK6Q6UWN8 80 aa4.68□□□□□ -1.66
BRCA1-201ENST00000352993 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
BRCA1-201ENST00000352993 KRTAP10-11P60412 298 aa4.66□□□□□ -1.66
BRCA1-201ENST00000352993 K7EIL1 84 aa4.66□□□□□ -1.66
BRCA1-201ENST00000352993 KRTAP24-1Q3LI83 254 aa4.66□□□□□ -1.66
BRCA1-201ENST00000352993 MRPL34Q9BQ48 92 aaKnown RBP4.66□□□□□ -1.66
BRCA1-201ENST00000352993 PLAC8Q9NZF1 115 aa4.65□□□□□ -1.66
BRCA1-201ENST00000352993 NOTCH1P46531 2555 aa4.65□□□□□ -1.66
BRCA1-201ENST00000352993 LYSTQ99698 3801 aa4.65□□□□□ -1.67
BRCA1-201ENST00000352993 A0A1B0GU69 56 aa4.64□□□□□ -1.67
BRCA1-201ENST00000352993 A0A1B0GVX0 72 aa4.64□□□□□ -1.67
BRCA1-201ENST00000352993 UBE2DNLQ8IWF7 75 aa4.64□□□□□ -1.67
BRCA1-201ENST00000352993 COL6A5A8TX70 2615 aa4.64□□□□□ -1.67
BRCA1-201ENST00000352993 RETNLBQ9BQ08 111 aa4.64□□□□□ -1.67
BRCA1-201ENST00000352993 ACYP2P14621 99 aa4.64□□□□□ -1.67
BRCA1-201ENST00000352993 LINC01554Q52M75 96 aa4.64□□□□□ -1.67
BRCA1-201ENST00000352993 Q6ZR54 194 aa4.64□□□□□ -1.67
BRCA1-201ENST00000352993 H3BS24 57 aa4.63□□□□□ -1.67
BRCA1-201ENST00000352993 SPRR1BP22528 89 aa4.63□□□□□ -1.67
BRCA1-201ENST00000352993 A0A087X002 238 aa4.62□□□□□ -1.67
BRCA1-201ENST00000352993 NOTCH2NLQ7Z3S9 236 aa4.62□□□□□ -1.67
BRCA1-201ENST00000352993 MEGF8Q7Z7M0 2845 aa4.62□□□□□ -1.67
BRCA1-201ENST00000352993 ANAPC11Q9NYG5 84 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms