RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 KTN1-AS1Q86SY8 53 aa9.54□□□□□ -0.88
TRAF3-202ENST00000351691 KRTAP29-1A8MX34 341 aaPredicted RBP9.53□□□□□ -0.88
TRAF3-202ENST00000351691 ANK2Q01484 3957 aa9.52□□□□□ -0.88
TRAF3-202ENST00000351691 IGKV2D-24A0A075B6R9 120 aa9.52□□□□□ -0.89
TRAF3-202ENST00000351691 DEFB131BA0A096LNP1 70 aa9.52□□□□□ -0.89
TRAF3-202ENST00000351691 CHKB-CPT1BH3BT56 60 aa9.52□□□□□ -0.89
TRAF3-202ENST00000351691 ATP11AUNQ6ZP68 121 aa9.51□□□□□ -0.89
TRAF3-202ENST00000351691 Q75L30 129 aa9.51□□□□□ -0.89
TRAF3-202ENST00000351691 LINC00476Q8WZB0 136 aa9.51□□□□□ -0.89
TRAF3-202ENST00000351691 C16orf90A8MZG2 172 aa9.51□□□□□ -0.89
TRAF3-202ENST00000351691 C11orf45Q8TAV5 145 aa9.51□□□□□ -0.89
TRAF3-202ENST00000351691 LOC101927531A0A1B0GV80 90 aa9.5□□□□□ -0.89
TRAF3-202ENST00000351691 IGLV8-61A0A075B6I0 122 aa9.5□□□□□ -0.89
TRAF3-202ENST00000351691 RPL37AP8A6NKH3 93 aa9.49□□□□□ -0.89
TRAF3-202ENST00000351691 H0Y9P7 68 aa9.49□□□□□ -0.89
TRAF3-202ENST00000351691 NDUFS5O43920 106 aa9.49□□□□□ -0.89
TRAF3-202ENST00000351691 DNAH10OSP0CZ25 163 aa9.49□□□□□ -0.89
TRAF3-202ENST00000351691 NOTCH1P46531 2555 aa9.49□□□□□ -0.89
TRAF3-202ENST00000351691 WFDC13Q8IUB5 93 aa9.48□□□□□ -0.89
TRAF3-202ENST00000351691 C9orf163Q8N9P6 203 aa9.48□□□□□ -0.89
TRAF3-202ENST00000351691 A8MU10 97 aa9.47□□□□□ -0.89
TRAF3-202ENST00000351691 PRR15LQ9BU68 103 aa9.47□□□□□ -0.89
TRAF3-202ENST00000351691 DNAH3Q8TD57 4116 aa9.47□□□□□ -0.89
TRAF3-202ENST00000351691 IGFL1Q6UW32 110 aa9.47□□□□□ -0.89
TRAF3-202ENST00000351691 MDFIQ99750 246 aa9.46□□□□□ -0.89
TRAF3-202ENST00000351691 PHF5AQ7RTV0 110 aaKnown RBP9.45□□□□□ -0.9
TRAF3-202ENST00000351691 CASC2Q6XLA1 102 aa9.43□□□□□ -0.9
TRAF3-202ENST00000351691 LCA10Q71F78 164 aa9.43□□□□□ -0.9
TRAF3-202ENST00000351691 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
TRAF3-202ENST00000351691 FAM168BA1KXE4 195 aa9.42□□□□□ -0.9
TRAF3-202ENST00000351691 PRB2P02812 416 aaPredicted RBP9.42□□□□□ -0.9
TRAF3-202ENST00000351691 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
TRAF3-202ENST00000351691 A6NN06 94 aa9.41□□□□□ -0.9
TRAF3-202ENST00000351691 RBM12B-AS1Q9P1G2 102 aa9.41□□□□□ -0.9
TRAF3-202ENST00000351691 IGLV7-46A0A075B6I9 117 aa9.41□□□□□ -0.9
TRAF3-202ENST00000351691 REG3GQ6UW15 175 aa9.41□□□□□ -0.9
TRAF3-202ENST00000351691 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.9
TRAF3-202ENST00000351691 CDC42SE1Q9NRR8 79 aa9.4□□□□□ -0.9
TRAF3-202ENST00000351691 A0A087WSZ3 146 aa9.4□□□□□ -0.91
TRAF3-202ENST00000351691 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
TRAF3-202ENST00000351691 COA5Q86WW8 74 aa9.39□□□□□ -0.91
TRAF3-202ENST00000351691 MGAM2Q2M2H8 2515 aa9.38□□□□□ -0.91
TRAF3-202ENST00000351691 TENM3Q9P273 2699 aa9.38□□□□□ -0.91
TRAF3-202ENST00000351691 A6NED7 52 aa9.38□□□□□ -0.91
TRAF3-202ENST00000351691 A8MWP4 228 aa9.38□□□□□ -0.91
TRAF3-202ENST00000351691 SPTSSBQ8NFR3 76 aa9.37□□□□□ -0.91
TRAF3-202ENST00000351691 RPL37AP61513 92 aaKnown RBP9.36□□□□□ -0.91
TRAF3-202ENST00000351691 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
TRAF3-202ENST00000351691 LINC01558Q9Y6Z2 57 aa9.36□□□□□ -0.91
TRAF3-202ENST00000351691 A0A0G2JQZ4 141 aa9.33□□□□□ -0.92
TRAF3-202ENST00000351691 A0A1W2PNN7 141 aa9.33□□□□□ -0.92
TRAF3-202ENST00000351691 LINC00472Q9H8W2 130 aa9.33□□□□□ -0.92
TRAF3-202ENST00000351691 C7orf65Q6ZTY9 151 aa9.31□□□□□ -0.92
TRAF3-202ENST00000351691 SPRR1BP22528 89 aa9.29□□□□□ -0.92
TRAF3-202ENST00000351691 K7EIL1 84 aa9.28□□□□□ -0.92
TRAF3-202ENST00000351691 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
TRAF3-202ENST00000351691 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
TRAF3-202ENST00000351691 CASC10Q5T4H9 136 aa9.27□□□□□ -0.93
TRAF3-202ENST00000351691 MOBPQ13875 183 aa9.26□□□□□ -0.93
TRAF3-202ENST00000351691 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
TRAF3-202ENST00000351691 HUWE1Q7Z6Z7 4374 aaKnown RBP9.24□□□□□ -0.93
TRAF3-202ENST00000351691 H0Y9J4 135 aa9.23□□□□□ -0.93
TRAF3-202ENST00000351691 PRLHP81277 87 aa9.23□□□□□ -0.93
TRAF3-202ENST00000351691 Q6ZR54 194 aa9.23□□□□□ -0.93
TRAF3-202ENST00000351691 DNHD1Q96M86 4753 aa9.22□□□□□ -0.93
TRAF3-202ENST00000351691 COL7A1Q02388 2944 aa9.22□□□□□ -0.93
TRAF3-202ENST00000351691 SPAG11AQ6PDA7 123 aa9.19□□□□□ -0.94
TRAF3-202ENST00000351691 PCOTHQ58A44 107 aa9.17□□□□□ -0.94
TRAF3-202ENST00000351691 DNAH9Q9NYC9 4486 aa9.16□□□□□ -0.94
TRAF3-202ENST00000351691 C14orf177Q52M58 125 aa9.15□□□□□ -0.94
TRAF3-202ENST00000351691 IGKV2-24A0A0C4DH68 120 aa9.15□□□□□ -0.95
TRAF3-202ENST00000351691 HRES1P13985 223 aa9.15□□□□□ -0.95
TRAF3-202ENST00000351691 SPINK7P58062 85 aa9.15□□□□□ -0.95
TRAF3-202ENST00000351691 A0A096LNI7 61 aa9.13□□□□□ -0.95
TRAF3-202ENST00000351691 DNAH1Q9P2D7 4330 aa9.13□□□□□ -0.95
TRAF3-202ENST00000351691 PRKDCP78527 4128 aaKnown RBP9.11□□□□□ -0.95
TRAF3-202ENST00000351691 C8orf17Q9NRJ1 99 aa9.11□□□□□ -0.95
TRAF3-202ENST00000351691 STAB2Q8WWQ8 2551 aa9.11□□□□□ -0.95
TRAF3-202ENST00000351691 Q96NJ1 140 aa9.11□□□□□ -0.95
TRAF3-202ENST00000351691 APLNQ9ULZ1 77 aa9.11□□□□□ -0.95
TRAF3-202ENST00000351691 UBE2DNLQ8IWF7 75 aa9.1□□□□□ -0.95
TRAF3-202ENST00000351691 KRTAP1-5Q9BYS1 174 aa9.09□□□□□ -0.95
TRAF3-202ENST00000351691 A0A087X002 238 aa9.05□□□□□ -0.96
TRAF3-202ENST00000351691 MEGF8Q7Z7M0 2845 aa9.05□□□□□ -0.96
TRAF3-202ENST00000351691 A0A1B0GVX0 72 aa9.04□□□□□ -0.96
TRAF3-202ENST00000351691 C8orf87E5RJ46 101 aa9.03□□□□□ -0.96
TRAF3-202ENST00000351691 KRTAP11-1Q8IUC1 163 aa9.03□□□□□ -0.96
TRAF3-202ENST00000351691 LYSTQ99698 3801 aa9.03□□□□□ -0.96
TRAF3-202ENST00000351691 MRPL34Q9BQ48 92 aaKnown RBP9.03□□□□□ -0.96
TRAF3-202ENST00000351691 LINC00313P59037 77 aa9.01□□□□□ -0.97
TRAF3-202ENST00000351691 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
TRAF3-202ENST00000351691 CSMD3Q7Z407 3707 aa9□□□□□ -0.97
TRAF3-202ENST00000351691 KRTAP13-1Q8IUC0 172 aa9□□□□□ -0.97
TRAF3-202ENST00000351691 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
TRAF3-202ENST00000351691 NBDYA0A0U1RRE5 68 aa8.97□□□□□ -0.97
TRAF3-202ENST00000351691 NUPR2A6NF83 97 aa8.96□□□□□ -0.97
TRAF3-202ENST00000351691 ACYP2P14621 99 aa8.96□□□□□ -0.97
TRAF3-202ENST00000351691 IGHV6-1A0A0B4J1U7 121 aa8.96□□□□□ -0.98
TRAF3-202ENST00000351691 CDK2AP2O75956 126 aa8.96□□□□□ -0.98
TRAF3-202ENST00000351691 KRTAP21-3Q3LHN1 58 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms