RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CRIPTQ9P021 101 aa7.84□□□□□ -1.16
SMAD9-201ENST00000350148 MOBPQ13875 183 aa7.83□□□□□ -1.16
SMAD9-201ENST00000350148 ZNF861PO60384 105 aa7.82□□□□□ -1.16
SMAD9-201ENST00000350148 PLA2G1BP04054 148 aaKnown RBP7.82□□□□□ -1.16
SMAD9-201ENST00000350148 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
SMAD9-201ENST00000350148 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
SMAD9-201ENST00000350148 IGKV2-30P06310 120 aa7.8□□□□□ -1.16
SMAD9-201ENST00000350148 Q8N377 158 aa7.8□□□□□ -1.16
SMAD9-201ENST00000350148 OBSCN-AS1Q96MR7 158 aa7.79□□□□□ -1.16
SMAD9-201ENST00000350148 A0A1W2PNN7 141 aa7.79□□□□□ -1.16
SMAD9-201ENST00000350148 KRTAP26-1Q6PEX3 210 aa7.78□□□□□ -1.16
SMAD9-201ENST00000350148 CHD6Q8TD26 2715 aa7.77□□□□□ -1.17
SMAD9-201ENST00000350148 FP248Q71RG6 208 aaPredicted RBP7.77□□□□□ -1.17
SMAD9-201ENST00000350148 FLNCQ14315 2725 aa7.76□□□□□ -1.17
SMAD9-201ENST00000350148 ATMQ13315 3056 aa7.76□□□□□ -1.17
SMAD9-201ENST00000350148 PRAC1Q96KF2 57 aa7.76□□□□□ -1.17
SMAD9-201ENST00000350148 KRTAP21-3Q3LHN1 58 aa7.75□□□□□ -1.17
SMAD9-201ENST00000350148 UBR5O95071 2799 aaPredicted RBP7.74□□□□□ -1.17
SMAD9-201ENST00000350148 MAST4O15021 2626 aa7.74□□□□□ -1.17
SMAD9-201ENST00000350148 IGLV5-48A0A075B6I7 105 aa7.74□□□□□ -1.17
SMAD9-201ENST00000350148 IGFL1Q6UW32 110 aa7.74□□□□□ -1.17
SMAD9-201ENST00000350148 IGLV7-43P04211 117 aa7.73□□□□□ -1.17
SMAD9-201ENST00000350148 TEX15Q9BXT5 2789 aa7.73□□□□□ -1.17
SMAD9-201ENST00000350148 RELNP78509 3460 aa7.73□□□□□ -1.17
SMAD9-201ENST00000350148 TYMSOSQ8TAI1 123 aa7.73□□□□□ -1.17
SMAD9-201ENST00000350148 K7EQZ3 153 aa7.73□□□□□ -1.17
SMAD9-201ENST00000350148 LINC00313P59037 77 aa7.72□□□□□ -1.17
SMAD9-201ENST00000350148 A8MWP4 228 aa7.72□□□□□ -1.17
SMAD9-201ENST00000350148 MUC3AQ02505 3323 aa7.72□□□□□ -1.17
SMAD9-201ENST00000350148 SPRR1AP35321 89 aa7.72□□□□□ -1.17
SMAD9-201ENST00000350148 SPRR4Q96PI1 79 aa7.72□□□□□ -1.17
SMAD9-201ENST00000350148 FAM229BQ4G0N7 80 aa7.71□□□□□ -1.18
SMAD9-201ENST00000350148 Q75L30 129 aa7.71□□□□□ -1.18
SMAD9-201ENST00000350148 LUZP6Q538Z0 58 aa7.71□□□□□ -1.18
SMAD9-201ENST00000350148 SPANXA2-OT1Q8N9U9 137 aa7.71□□□□□ -1.18
SMAD9-201ENST00000350148 PSORS1C2Q9UIG4 136 aa7.7□□□□□ -1.18
SMAD9-201ENST00000350148 SPACA4Q8TDM5 124 aa7.7□□□□□ -1.18
SMAD9-201ENST00000350148 KMT2BQ9UMN6 2715 aaPredicted RBP7.7□□□□□ -1.18
SMAD9-201ENST00000350148 A0A0A0MQY5 61 aa7.69□□□□□ -1.18
SMAD9-201ENST00000350148 PLAC8Q9NZF1 115 aa7.68□□□□□ -1.18
SMAD9-201ENST00000350148 DMXL1Q9Y485 3027 aa7.67□□□□□ -1.18
SMAD9-201ENST00000350148 TNP2Q05952 138 aa7.66□□□□□ -1.18
SMAD9-201ENST00000350148 SETXQ7Z333 2677 aaKnown RBP7.66□□□□□ -1.18
SMAD9-201ENST00000350148 MAP1AP78559 2803 aaPredicted RBP7.65□□□□□ -1.18
SMAD9-201ENST00000350148 BAHCC1Q9P281 2608 aa7.64□□□□□ -1.19
SMAD9-201ENST00000350148 TEP1Q99973 2627 aaKnown RBP7.64□□□□□ -1.19
SMAD9-201ENST00000350148 MGAM2Q2M2H8 2515 aa7.64□□□□□ -1.19
SMAD9-201ENST00000350148 UTP20O75691 2785 aaKnown RBP7.63□□□□□ -1.19
SMAD9-201ENST00000350148 KRTAP1-5Q9BYS1 174 aa7.63□□□□□ -1.19
SMAD9-201ENST00000350148 A0A1W2PNM2 257 aa7.62□□□□□ -1.19
SMAD9-201ENST00000350148 CSAG1Q6PB30 78 aa7.62□□□□□ -1.19
SMAD9-201ENST00000350148 APCP25054 2843 aa7.62□□□□□ -1.19
SMAD9-201ENST00000350148 SPRR1BP22528 89 aa7.61□□□□□ -1.19
SMAD9-201ENST00000350148 Q8NDZ9 215 aa7.61□□□□□ -1.19
SMAD9-201ENST00000350148 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.61□□□□□ -1.19
SMAD9-201ENST00000350148 MRPL34Q9BQ48 92 aaKnown RBP7.6□□□□□ -1.19
SMAD9-201ENST00000350148 A0A0G2JQZ4 141 aa7.59□□□□□ -1.19
SMAD9-201ENST00000350148 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
SMAD9-201ENST00000350148 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
SMAD9-201ENST00000350148 Q5VV11 94 aa7.58□□□□□ -1.2
SMAD9-201ENST00000350148 A0A1B0GVX0 72 aa7.58□□□□□ -1.2
SMAD9-201ENST00000350148 Q6ZR54 194 aa7.58□□□□□ -1.2
SMAD9-201ENST00000350148 HRNRQ86YZ3 2850 aaPredicted RBP7.58□□□□□ -1.2
SMAD9-201ENST00000350148 CUBNO60494 3623 aa7.57□□□□□ -1.2
SMAD9-201ENST00000350148 Q8N9P0 234 aaPredicted RBP7.57□□□□□ -1.2
SMAD9-201ENST00000350148 OCR1Q9BZK8 76 aa7.57□□□□□ -1.2
SMAD9-201ENST00000350148 C8orf17Q9NRJ1 99 aa7.57□□□□□ -1.2
SMAD9-201ENST00000350148 DMAC1Q96GE9 116 aa7.56□□□□□ -1.2
SMAD9-201ENST00000350148 ZFHX3Q15911 3703 aa7.55□□□□□ -1.2
SMAD9-201ENST00000350148 ITPR1Q14643 2758 aa7.55□□□□□ -1.2
SMAD9-201ENST00000350148 COL6A5A8TX70 2615 aa7.55□□□□□ -1.2
SMAD9-201ENST00000350148 ITPR2Q14571 2701 aa7.54□□□□□ -1.2
SMAD9-201ENST00000350148 COL12A1Q99715 3063 aa7.54□□□□□ -1.2
SMAD9-201ENST00000350148 LCE6AA0A183 80 aa7.53□□□□□ -1.2
SMAD9-201ENST00000350148 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
SMAD9-201ENST00000350148 HIVEP1P15822 2718 aa7.51□□□□□ -1.21
SMAD9-201ENST00000350148 ASH1LQ9NR48 2969 aaKnown RBP7.51□□□□□ -1.21
SMAD9-201ENST00000350148 NSD1Q96L73 2696 aaPredicted RBP7.51□□□□□ -1.21
SMAD9-201ENST00000350148 GCN1Q92616 2671 aaKnown RBP7.49□□□□□ -1.21
SMAD9-201ENST00000350148 KRTAP4-16G5E9R7 235 aaPredicted RBP7.49□□□□□ -1.21
SMAD9-201ENST00000350148 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
SMAD9-201ENST00000350148 Q96NJ1 140 aa7.47□□□□□ -1.21
SMAD9-201ENST00000350148 DCHS2Q6V1P9 2916 aa7.47□□□□□ -1.21
SMAD9-201ENST00000350148 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.21
SMAD9-201ENST00000350148 STAB1Q9NY15 2570 aa7.45□□□□□ -1.22
SMAD9-201ENST00000350148 ANAPC11Q9NYG5 84 aa7.45□□□□□ -1.22
SMAD9-201ENST00000350148 SMR3BP02814 79 aaPredicted RBP7.44□□□□□ -1.22
SMAD9-201ENST00000350148 LINC00483Q53H64 154 aa7.44□□□□□ -1.22
SMAD9-201ENST00000350148 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
SMAD9-201ENST00000350148 SPINK7P58062 85 aa7.43□□□□□ -1.22
SMAD9-201ENST00000350148 DSCR10P59022 87 aa7.42□□□□□ -1.22
SMAD9-201ENST00000350148 ASB16-AS1Q495Z4 193 aa7.41□□□□□ -1.22
SMAD9-201ENST00000350148 CELSR1Q9NYQ6 3014 aa7.41□□□□□ -1.22
SMAD9-201ENST00000350148 A0A0D9SG42 100 aa7.38□□□□□ -1.23
SMAD9-201ENST00000350148 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
SMAD9-201ENST00000350148 NOTCH1P46531 2555 aa7.37□□□□□ -1.23
SMAD9-201ENST00000350148 BSNQ9UPA5 3926 aa7.36□□□□□ -1.23
SMAD9-201ENST00000350148 KRTAP10-2P60368 255 aa7.36□□□□□ -1.23
SMAD9-201ENST00000350148 J3QL48 77 aa7.36□□□□□ -1.23
SMAD9-201ENST00000350148 LINC00472Q9H8W2 130 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms