RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SPRR1BP22528 89 aa4.29□□□□□ -1.72
TRIM55-203ENST00000350034 PRLHP81277 87 aa4.29□□□□□ -1.72
TRIM55-203ENST00000350034 ATP5EP2Q5VTU8 51 aa4.29□□□□□ -1.72
TRIM55-203ENST00000350034 PLAC8Q9NZF1 115 aa4.29□□□□□ -1.72
TRIM55-203ENST00000350034 IGLV8-61A0A075B6I0 122 aa4.28□□□□□ -1.72
TRIM55-203ENST00000350034 A0A1B0GW54 56 aa4.28□□□□□ -1.72
TRIM55-203ENST00000350034 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
TRIM55-203ENST00000350034 BCE1O60756 84 aa4.28□□□□□ -1.72
TRIM55-203ENST00000350034 XP32Q5T750 250 aa4.28□□□□□ -1.72
TRIM55-203ENST00000350034 Q6ZVQ6 151 aa4.28□□□□□ -1.72
TRIM55-203ENST00000350034 UBL5Q9BZL1 73 aa4.28□□□□□ -1.72
TRIM55-203ENST00000350034 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
TRIM55-203ENST00000350034 IGKV3D-7A0A0C4DH55 119 aa4.27□□□□□ -1.73
TRIM55-203ENST00000350034 FUSP35637 526 aaKnown RBP eCLIP4.27□□□□□ -1.73
TRIM55-203ENST00000350034 HIST1H4AP62805 103 aaKnown RBP4.27□□□□□ -1.73
TRIM55-203ENST00000350034 C3orf22Q8N5N4 141 aa4.27□□□□□ -1.73
TRIM55-203ENST00000350034 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
TRIM55-203ENST00000350034 A0A1W2PNM2 257 aa4.26□□□□□ -1.73
TRIM55-203ENST00000350034 HIGD2AQ9BW72 106 aa4.26□□□□□ -1.73
TRIM55-203ENST00000350034 MUC2Q02817 5179 aa4.26□□□□□ -1.73
TRIM55-203ENST00000350034 UBE2AP49459 152 aa4.25□□□□□ -1.73
TRIM55-203ENST00000350034 C1orf137Q5JT78 98 aa4.25□□□□□ -1.73
TRIM55-203ENST00000350034 Q8NBF4 154 aa4.25□□□□□ -1.73
TRIM55-203ENST00000350034 DPH3Q96FX2 82 aa4.25□□□□□ -1.73
TRIM55-203ENST00000350034 SPRR4Q96PI1 79 aa4.25□□□□□ -1.73
TRIM55-203ENST00000350034 DMBT1Q9UGM3 2413 aaPredicted RBP4.24□□□□□ -1.73
TRIM55-203ENST00000350034 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
TRIM55-203ENST00000350034 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
TRIM55-203ENST00000350034 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
TRIM55-203ENST00000350034 CXCL6P80162 114 aa4.24□□□□□ -1.73
TRIM55-203ENST00000350034 ANAPC13Q9BS18 74 aa4.24□□□□□ -1.73
TRIM55-203ENST00000350034 DNAH10Q8IVF4 4471 aa4.24□□□□□ -1.73
TRIM55-203ENST00000350034 CRYGAP11844 174 aa4.23□□□□□ -1.73
TRIM55-203ENST00000350034 DNAH6Q9C0G6 4158 aa4.23□□□□□ -1.73
TRIM55-203ENST00000350034 F8WEM9 126 aa4.22□□□□□ -1.73
TRIM55-203ENST00000350034 LINC00483Q53H64 154 aa4.22□□□□□ -1.73
TRIM55-203ENST00000350034 IGFL1Q6UW32 110 aa4.22□□□□□ -1.73
TRIM55-203ENST00000350034 Q6ZSA8 131 aa4.22□□□□□ -1.73
TRIM55-203ENST00000350034 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
TRIM55-203ENST00000350034 PSORS1C2Q9UIG4 136 aa4.22□□□□□ -1.73
TRIM55-203ENST00000350034 A0A087WVE0 104 aa4.21□□□□□ -1.74
TRIM55-203ENST00000350034 HAMPP81172 84 aa4.21□□□□□ -1.74
TRIM55-203ENST00000350034 NREPQ16612 68 aa4.21□□□□□ -1.74
TRIM55-203ENST00000350034 FAM30AQ9NZY2 134 aa4.21□□□□□ -1.74
TRIM55-203ENST00000350034 ALMS1Q8TCU4 4167 aa4.21□□□□□ -1.74
TRIM55-203ENST00000350034 DNAH17Q9UFH2 4485 aa4.21□□□□□ -1.74
TRIM55-203ENST00000350034 ATOX1O00244 68 aa4.2□□□□□ -1.74
TRIM55-203ENST00000350034 ZNF861PO60384 105 aa4.2□□□□□ -1.74
TRIM55-203ENST00000350034 A0A0G2JQZ4 141 aa4.19□□□□□ -1.74
TRIM55-203ENST00000350034 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
TRIM55-203ENST00000350034 CIRBP-AS1Q8TBR5 109 aa4.19□□□□□ -1.74
TRIM55-203ENST00000350034 ZNF706Q9Y5V0 76 aaPredicted RBP4.19□□□□□ -1.74
TRIM55-203ENST00000350034 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
TRIM55-203ENST00000350034 RPL37AP61513 92 aaKnown RBP4.18□□□□□ -1.74
TRIM55-203ENST00000350034 SCXQ7RTU7 201 aa4.18□□□□□ -1.74
TRIM55-203ENST00000350034 DNAH2Q9P225 4427 aa4.17□□□□□ -1.74
TRIM55-203ENST00000350034 CCDC179H3BU77 68 aa4.17□□□□□ -1.74
TRIM55-203ENST00000350034 BPY2O14599 106 aa4.17□□□□□ -1.74
TRIM55-203ENST00000350034 IGKV4-1P06312 121 aa4.17□□□□□ -1.74
TRIM55-203ENST00000350034 UQCRQO14949 82 aa4.16□□□□□ -1.74
TRIM55-203ENST00000350034 COX7CP15954 63 aa4.16□□□□□ -1.74
TRIM55-203ENST00000350034 DSCR10P59022 87 aa4.16□□□□□ -1.74
TRIM55-203ENST00000350034 SERP2Q8N6R1 65 aa4.16□□□□□ -1.74
TRIM55-203ENST00000350034 KMT2AQ03164 3969 aa4.15□□□□□ -1.74
TRIM55-203ENST00000350034 A0A087WSZ3 146 aa4.15□□□□□ -1.75
TRIM55-203ENST00000350034 LINC00336Q6ZUF6 198 aa4.15□□□□□ -1.75
TRIM55-203ENST00000350034 Q8N9L7 120 aa4.14□□□□□ -1.75
TRIM55-203ENST00000350034 A0A1B0GVY2 172 aa4.13□□□□□ -1.75
TRIM55-203ENST00000350034 LINC00472Q9H8W2 130 aa4.13□□□□□ -1.75
TRIM55-203ENST00000350034 TRAV7A0A075B6U4 112 aa4.12□□□□□ -1.75
TRIM55-203ENST00000350034 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
TRIM55-203ENST00000350034 SMIM20Q8N5G0 67 aa4.12□□□□□ -1.75
TRIM55-203ENST00000350034 MOBPQ13875 183 aa4.11□□□□□ -1.75
TRIM55-203ENST00000350034 C9orf153Q5TBE3 101 aa4.11□□□□□ -1.75
TRIM55-203ENST00000350034 ANAPC11Q9NYG5 84 aa4.11□□□□□ -1.75
TRIM55-203ENST00000350034 DNAH8Q96JB1 4490 aa4.1□□□□□ -1.75
TRIM55-203ENST00000350034 K7EQZ3 153 aa4.1□□□□□ -1.75
TRIM55-203ENST00000350034 DNAH11Q96DT5 4516 aa4.1□□□□□ -1.75
TRIM55-203ENST00000350034 CD164Q04900 197 aa4.09□□□□□ -1.75
TRIM55-203ENST00000350034 SSBP3-AS1Q7Z2R9 100 aa4.09□□□□□ -1.75
TRIM55-203ENST00000350034 Q96NJ1 140 aa4.09□□□□□ -1.75
TRIM55-203ENST00000350034 OCR1Q9BZK8 76 aa4.09□□□□□ -1.75
TRIM55-203ENST00000350034 A8MWP4 228 aa4.08□□□□□ -1.76
TRIM55-203ENST00000350034 J3KT08 172 aa4.08□□□□□ -1.76
TRIM55-203ENST00000350034 KRTAP1-4P0C5Y4 121 aa4.08□□□□□ -1.76
TRIM55-203ENST00000350034 DEFB116Q30KQ4 102 aa4.08□□□□□ -1.76
TRIM55-203ENST00000350034 FAM229BQ4G0N7 80 aa4.08□□□□□ -1.76
TRIM55-203ENST00000350034 PRR15Q8IV56 129 aa4.08□□□□□ -1.76
TRIM55-203ENST00000350034 DNAH5Q8TE73 4624 aa4.08□□□□□ -1.76
TRIM55-203ENST00000350034 RNF213Q63HN8 5207 aa4.07□□□□□ -1.76
TRIM55-203ENST00000350034 KRTAP29-1A8MX34 341 aaPredicted RBP4.07□□□□□ -1.76
TRIM55-203ENST00000350034 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
TRIM55-203ENST00000350034 CYSTM1Q9H1C7 97 aa4.07□□□□□ -1.76
TRIM55-203ENST00000350034 SS18L2Q9UHA2 77 aa4.07□□□□□ -1.76
TRIM55-203ENST00000350034 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
TRIM55-203ENST00000350034 FAT4Q6V0I7 4981 aa4.06□□□□□ -1.76
TRIM55-203ENST00000350034 KRTAP13-2Q52LG2 175 aa4.06□□□□□ -1.76
TRIM55-203ENST00000350034 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
TRIM55-203ENST00000350034 FAT2Q9NYQ8 4349 aa4.06□□□□□ -1.76
TRIM55-203ENST00000350034 A0A087X002 238 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms