RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SPINK1P00995 79 aa9.29□□□□□ -0.92
NUP50-201ENST00000347635 LINC00313P59037 77 aa9.29□□□□□ -0.92
NUP50-201ENST00000347635 WDFY3Q8IZQ1 3526 aa9.29□□□□□ -0.92
NUP50-201ENST00000347635 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
NUP50-201ENST00000347635 SSBP3-AS1Q7Z2R9 100 aa9.28□□□□□ -0.92
NUP50-201ENST00000347635 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
NUP50-201ENST00000347635 TACC2O95359 2948 aa9.27□□□□□ -0.93
NUP50-201ENST00000347635 LOC400499M0QZD8 3231 aa9.27□□□□□ -0.93
NUP50-201ENST00000347635 C8orf87E5RJ46 101 aa9.27□□□□□ -0.93
NUP50-201ENST00000347635 BAHCC1Q9P281 2608 aa9.26□□□□□ -0.93
NUP50-201ENST00000347635 CHD6Q8TD26 2715 aa9.25□□□□□ -0.93
NUP50-201ENST00000347635 ATMQ13315 3056 aa9.24□□□□□ -0.93
NUP50-201ENST00000347635 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
NUP50-201ENST00000347635 MAP1AP78559 2803 aaPredicted RBP9.22□□□□□ -0.93
NUP50-201ENST00000347635 DMXL2Q8TDJ6 3036 aa9.22□□□□□ -0.93
NUP50-201ENST00000347635 ATP11AUNQ6ZP68 121 aa9.21□□□□□ -0.93
NUP50-201ENST00000347635 ANAPC11Q9NYG5 84 aa9.18□□□□□ -0.94
NUP50-201ENST00000347635 TEP1Q99973 2627 aaKnown RBP9.18□□□□□ -0.94
NUP50-201ENST00000347635 TNP2Q05952 138 aa9.18□□□□□ -0.94
NUP50-201ENST00000347635 PSORS1C2Q9UIG4 136 aa9.18□□□□□ -0.94
NUP50-201ENST00000347635 IGLV8-61A0A075B6I0 122 aa9.17□□□□□ -0.94
NUP50-201ENST00000347635 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
NUP50-201ENST00000347635 IGLV7-46A0A075B6I9 117 aa9.14□□□□□ -0.95
NUP50-201ENST00000347635 KTN1-AS1Q86SY8 53 aa9.14□□□□□ -0.95
NUP50-201ENST00000347635 HRNRQ86YZ3 2850 aaPredicted RBP9.14□□□□□ -0.95
NUP50-201ENST00000347635 GCN1Q92616 2671 aaKnown RBP9.14□□□□□ -0.95
NUP50-201ENST00000347635 DMXL1Q9Y485 3027 aa9.14□□□□□ -0.95
NUP50-201ENST00000347635 COL6A5A8TX70 2615 aa9.14□□□□□ -0.95
NUP50-201ENST00000347635 KRTAP4-16G5E9R7 235 aaPredicted RBP9.14□□□□□ -0.95
NUP50-201ENST00000347635 LINC00304Q8N9R0 145 aa9.14□□□□□ -0.95
NUP50-201ENST00000347635 MMP24-AS1A0A0U1RRL7 71 aa9.13□□□□□ -0.95
NUP50-201ENST00000347635 CD164Q04900 197 aa9.12□□□□□ -0.95
NUP50-201ENST00000347635 TEX15Q9BXT5 2789 aa9.12□□□□□ -0.95
NUP50-201ENST00000347635 J3QL48 77 aa9.12□□□□□ -0.95
NUP50-201ENST00000347635 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
NUP50-201ENST00000347635 SPRR1BP22528 89 aa9.1□□□□□ -0.95
NUP50-201ENST00000347635 LINC00472Q9H8W2 130 aa9.09□□□□□ -0.95
NUP50-201ENST00000347635 Q96NJ1 140 aa9.09□□□□□ -0.95
NUP50-201ENST00000347635 FLNCQ14315 2725 aa9.09□□□□□ -0.95
NUP50-201ENST00000347635 STAB1Q9NY15 2570 aa9.09□□□□□ -0.95
NUP50-201ENST00000347635 Q8N9P0 234 aaPredicted RBP9.08□□□□□ -0.96
NUP50-201ENST00000347635 Q75L30 129 aa9.07□□□□□ -0.96
NUP50-201ENST00000347635 UQCR11O14957 56 aa9.07□□□□□ -0.96
NUP50-201ENST00000347635 SMR3BP02814 79 aaPredicted RBP9.07□□□□□ -0.96
NUP50-201ENST00000347635 PLAC8Q9NZF1 115 aa9.07□□□□□ -0.96
NUP50-201ENST00000347635 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.06□□□□□ -0.96
NUP50-201ENST00000347635 ZFHX4Q86UP3 3567 aa9.05□□□□□ -0.96
NUP50-201ENST00000347635 DMDP11532 3685 aa9.03□□□□□ -0.96
NUP50-201ENST00000347635 SETXQ7Z333 2677 aaKnown RBP9.03□□□□□ -0.96
NUP50-201ENST00000347635 Q5VV11 94 aa9.03□□□□□ -0.96
NUP50-201ENST00000347635 COL12A1Q99715 3063 aa9.03□□□□□ -0.96
NUP50-201ENST00000347635 NBEAL2Q6ZNJ1 2754 aa9.03□□□□□ -0.96
NUP50-201ENST00000347635 LCE6AA0A183 80 aa9.02□□□□□ -0.96
NUP50-201ENST00000347635 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.96
NUP50-201ENST00000347635 MIR22HGQ0VDD5 57 aa9.02□□□□□ -0.97
NUP50-201ENST00000347635 ZCCHC13Q8WW36 166 aaKnown RBP9.01□□□□□ -0.97
NUP50-201ENST00000347635 CFAP47Q6ZTR5 3102 aa9.01□□□□□ -0.97
NUP50-201ENST00000347635 ITPR1Q14643 2758 aa9□□□□□ -0.97
NUP50-201ENST00000347635 PRR26Q8N8Z3 221 aa8.99□□□□□ -0.97
NUP50-201ENST00000347635 LINC01558Q9Y6Z2 57 aa8.99□□□□□ -0.97
NUP50-201ENST00000347635 KRTAP29-1A8MX34 341 aaPredicted RBP8.97□□□□□ -0.97
NUP50-201ENST00000347635 KMT2BQ9UMN6 2715 aaPredicted RBP8.95□□□□□ -0.98
NUP50-201ENST00000347635 HRES1P13985 223 aa8.94□□□□□ -0.98
NUP50-201ENST00000347635 LCA10Q71F78 164 aa8.94□□□□□ -0.98
NUP50-201ENST00000347635 ITPR2Q14571 2701 aa8.94□□□□□ -0.98
NUP50-201ENST00000347635 UTP20O75691 2785 aaKnown RBP8.93□□□□□ -0.98
NUP50-201ENST00000347635 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
NUP50-201ENST00000347635 Q6ZR54 194 aa8.92□□□□□ -0.98
NUP50-201ENST00000347635 ASPMQ8IZT6 3477 aa8.91□□□□□ -0.98
NUP50-201ENST00000347635 NOTCH1P46531 2555 aa8.9□□□□□ -0.99
NUP50-201ENST00000347635 UBR5O95071 2799 aaPredicted RBP8.89□□□□□ -0.99
NUP50-201ENST00000347635 DCHS1Q96JQ0 3298 aa8.88□□□□□ -0.99
NUP50-201ENST00000347635 SMG1Q96Q15 3661 aaKnown RBP8.87□□□□□ -0.99
NUP50-201ENST00000347635 HIVEP1P15822 2718 aa8.87□□□□□ -0.99
NUP50-201ENST00000347635 LINC00483Q53H64 154 aa8.86□□□□□ -0.99
NUP50-201ENST00000347635 APCP25054 2843 aa8.85□□□□□ -0.99
NUP50-201ENST00000347635 RBM12B-AS1Q9P1G2 102 aa8.85□□□□□ -0.99
NUP50-201ENST00000347635 LAMA5O15230 3695 aa8.83□□□□□ -1
NUP50-201ENST00000347635 SPINK7P58062 85 aa8.82□□□□□ -1
NUP50-201ENST00000347635 RELNP78509 3460 aa8.82□□□□□ -1
NUP50-201ENST00000347635 Q8N1X5 172 aa8.82□□□□□ -1
NUP50-201ENST00000347635 PANO1I0J062 215 aa8.81□□□□□ -1
NUP50-201ENST00000347635 C9orf92A6NGG3 77 aa8.81□□□□□ -1
NUP50-201ENST00000347635 Q5W150 140 aa8.8□□□□□ -1
NUP50-201ENST00000347635 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
NUP50-201ENST00000347635 ZANQ9Y493 2812 aa8.8□□□□□ -1
NUP50-201ENST00000347635 NSD1Q96L73 2696 aaPredicted RBP8.8□□□□□ -1
NUP50-201ENST00000347635 CSMD1Q96PZ7 3565 aa8.79□□□□□ -1
NUP50-201ENST00000347635 KRTAP10-1P60331 282 aa8.77□□□□□ -1
NUP50-201ENST00000347635 KRTAP10-2P60368 255 aa8.76□□□□□ -1.01
NUP50-201ENST00000347635 DCHS2Q6V1P9 2916 aa8.75□□□□□ -1.01
NUP50-201ENST00000347635 MUC3AQ02505 3323 aa8.74□□□□□ -1.01
NUP50-201ENST00000347635 Q6ZRN7 208 aaPredicted RBP8.72□□□□□ -1.01
NUP50-201ENST00000347635 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
NUP50-201ENST00000347635 ASH1LQ9NR48 2969 aaKnown RBP8.69□□□□□ -1.02
NUP50-201ENST00000347635 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
NUP50-201ENST00000347635 Q5VSD8 79 aa8.67□□□□□ -1.02
NUP50-201ENST00000347635 A0A087X002 238 aa8.67□□□□□ -1.02
NUP50-201ENST00000347635 NOTCH2NLQ7Z3S9 236 aa8.67□□□□□ -1.02
NUP50-201ENST00000347635 PRAC1Q96KF2 57 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms