RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 Q96NJ1 140 aa6.72□□□□□ -1.33
SMG7-201ENST00000347615 ATP11AUNQ6ZP68 121 aa6.72□□□□□ -1.33
SMG7-201ENST00000347615 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.34
SMG7-201ENST00000347615 A0A1B0GW54 56 aa6.7□□□□□ -1.34
SMG7-201ENST00000347615 CUBNO60494 3623 aa6.7□□□□□ -1.34
SMG7-201ENST00000347615 C8orf17Q9NRJ1 99 aa6.69□□□□□ -1.34
SMG7-201ENST00000347615 IGSF10Q6WRI0 2623 aa6.67□□□□□ -1.34
SMG7-201ENST00000347615 TYMSOSQ8TAI1 123 aa6.67□□□□□ -1.34
SMG7-201ENST00000347615 FLNCQ14315 2725 aa6.67□□□□□ -1.34
SMG7-201ENST00000347615 OCR1Q9BZK8 76 aa6.67□□□□□ -1.34
SMG7-201ENST00000347615 LINC01600Q96MT4 127 aa6.67□□□□□ -1.34
SMG7-201ENST00000347615 UBR5O95071 2799 aaPredicted RBP6.66□□□□□ -1.34
SMG7-201ENST00000347615 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
SMG7-201ENST00000347615 SETXQ7Z333 2677 aaKnown RBP6.66□□□□□ -1.34
SMG7-201ENST00000347615 OXTP01178 125 aa6.66□□□□□ -1.34
SMG7-201ENST00000347615 Q5XG85 94 aa6.65□□□□□ -1.34
SMG7-201ENST00000347615 H3BPC8 53 aa6.65□□□□□ -1.35
SMG7-201ENST00000347615 SMR3BP02814 79 aaPredicted RBP6.64□□□□□ -1.35
SMG7-201ENST00000347615 PLA2G1BP04054 148 aaKnown RBP6.64□□□□□ -1.35
SMG7-201ENST00000347615 NOTCH1P46531 2555 aa6.63□□□□□ -1.35
SMG7-201ENST00000347615 PSORS1C2Q9UIG4 136 aa6.63□□□□□ -1.35
SMG7-201ENST00000347615 TLX1NBP0CAT3 122 aa6.63□□□□□ -1.35
SMG7-201ENST00000347615 A0A1B0GVX0 72 aa6.63□□□□□ -1.35
SMG7-201ENST00000347615 IGLV5-48A0A075B6I7 105 aa6.63□□□□□ -1.35
SMG7-201ENST00000347615 UTP20O75691 2785 aaKnown RBP6.62□□□□□ -1.35
SMG7-201ENST00000347615 CRYBG3Q68DQ2 2970 aa6.62□□□□□ -1.35
SMG7-201ENST00000347615 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
SMG7-201ENST00000347615 LOC101927531A0A1B0GV80 90 aa6.61□□□□□ -1.35
SMG7-201ENST00000347615 C9orf163Q8N9P6 203 aa6.61□□□□□ -1.35
SMG7-201ENST00000347615 ZANQ9Y493 2812 aa6.6□□□□□ -1.35
SMG7-201ENST00000347615 A0A087WTM6 91 aa6.6□□□□□ -1.35
SMG7-201ENST00000347615 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
SMG7-201ENST00000347615 ZNF861PO60384 105 aa6.59□□□□□ -1.35
SMG7-201ENST00000347615 PLA2G2DQ9UNK4 145 aa6.59□□□□□ -1.35
SMG7-201ENST00000347615 Q8N1X5 172 aa6.58□□□□□ -1.36
SMG7-201ENST00000347615 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
SMG7-201ENST00000347615 SPENQ96T58 3664 aaKnown RBP6.58□□□□□ -1.36
SMG7-201ENST00000347615 SPRR4Q96PI1 79 aa6.57□□□□□ -1.36
SMG7-201ENST00000347615 HIVEP1P15822 2718 aa6.56□□□□□ -1.36
SMG7-201ENST00000347615 CELSR2Q9HCU4 2923 aa6.56□□□□□ -1.36
SMG7-201ENST00000347615 C8orf87E5RJ46 101 aa6.56□□□□□ -1.36
SMG7-201ENST00000347615 APLNQ9ULZ1 77 aa6.56□□□□□ -1.36
SMG7-201ENST00000347615 HRNRQ86YZ3 2850 aaPredicted RBP6.56□□□□□ -1.36
SMG7-201ENST00000347615 BAHCC1Q9P281 2608 aa6.55□□□□□ -1.36
SMG7-201ENST00000347615 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
SMG7-201ENST00000347615 NBEAL1Q6ZS30 2694 aa6.55□□□□□ -1.36
SMG7-201ENST00000347615 COL6A5A8TX70 2615 aa6.55□□□□□ -1.36
SMG7-201ENST00000347615 FAM229AH3BQW9 127 aa6.55□□□□□ -1.36
SMG7-201ENST00000347615 FBN2P35556 2912 aa6.55□□□□□ -1.36
SMG7-201ENST00000347615 SSBP3-AS1Q7Z2R9 100 aa6.54□□□□□ -1.36
SMG7-201ENST00000347615 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
SMG7-201ENST00000347615 CYP4F30PQ9H0H9 118 aa6.53□□□□□ -1.36
SMG7-201ENST00000347615 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
SMG7-201ENST00000347615 UQCR11O14957 56 aa6.51□□□□□ -1.37
SMG7-201ENST00000347615 KRTAP1-5Q9BYS1 174 aa6.5□□□□□ -1.37
SMG7-201ENST00000347615 IGLV5-37A0A075B6J1 123 aa6.5□□□□□ -1.37
SMG7-201ENST00000347615 STAB1Q9NY15 2570 aa6.49□□□□□ -1.37
SMG7-201ENST00000347615 DCHS2Q6V1P9 2916 aa6.49□□□□□ -1.37
SMG7-201ENST00000347615 KTN1-AS1Q86SY8 53 aa6.48□□□□□ -1.37
SMG7-201ENST00000347615 APCP25054 2843 aa6.48□□□□□ -1.37
SMG7-201ENST00000347615 TNP2Q05952 138 aa6.48□□□□□ -1.37
SMG7-201ENST00000347615 Q1T7F1 81 aa6.47□□□□□ -1.37
SMG7-201ENST00000347615 CELSR1Q9NYQ6 3014 aa6.47□□□□□ -1.37
SMG7-201ENST00000347615 A0A0D9SG42 100 aa6.47□□□□□ -1.37
SMG7-201ENST00000347615 SPINT4Q6UDR6 99 aa6.47□□□□□ -1.37
SMG7-201ENST00000347615 Q8N9P0 234 aaPredicted RBP6.46□□□□□ -1.37
SMG7-201ENST00000347615 KRTAP26-1Q6PEX3 210 aa6.46□□□□□ -1.38
SMG7-201ENST00000347615 LINC00304Q8N9R0 145 aa6.45□□□□□ -1.38
SMG7-201ENST00000347615 CD164Q04900 197 aa6.45□□□□□ -1.38
SMG7-201ENST00000347615 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
SMG7-201ENST00000347615 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
SMG7-201ENST00000347615 PRAC1Q96KF2 57 aa6.44□□□□□ -1.38
SMG7-201ENST00000347615 NF1P21359 2839 aa6.44□□□□□ -1.38
SMG7-201ENST00000347615 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
SMG7-201ENST00000347615 NSD1Q96L73 2696 aaPredicted RBP6.42□□□□□ -1.38
SMG7-201ENST00000347615 WWC2-AS2Q96NR7 200 aa6.42□□□□□ -1.38
SMG7-201ENST00000347615 HRES1P13985 223 aa6.42□□□□□ -1.38
SMG7-201ENST00000347615 SPRR1AP35321 89 aa6.42□□□□□ -1.38
SMG7-201ENST00000347615 PANO1I0J062 215 aa6.41□□□□□ -1.38
SMG7-201ENST00000347615 Q5VV11 94 aa6.4□□□□□ -1.38
SMG7-201ENST00000347615 IGLV7-46A0A075B6I9 117 aa6.4□□□□□ -1.38
SMG7-201ENST00000347615 WIPF1O43516 503 aa6.4□□□□□ -1.39
SMG7-201ENST00000347615 SPINK7P58062 85 aa6.4□□□□□ -1.39
SMG7-201ENST00000347615 ITPR2Q14571 2701 aa6.39□□□□□ -1.39
SMG7-201ENST00000347615 LINC00472Q9H8W2 130 aa6.37□□□□□ -1.39
SMG7-201ENST00000347615 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
SMG7-201ENST00000347615 LINC01554Q52M75 96 aa6.36□□□□□ -1.39
SMG7-201ENST00000347615 LCA10Q71F78 164 aa6.35□□□□□ -1.39
SMG7-201ENST00000347615 CRIPTQ9P021 101 aa6.35□□□□□ -1.39
SMG7-201ENST00000347615 KRTAP11-1Q8IUC1 163 aa6.34□□□□□ -1.39
SMG7-201ENST00000347615 Q75L30 129 aa6.33□□□□□ -1.4
SMG7-201ENST00000347615 STAB2Q8WWQ8 2551 aa6.32□□□□□ -1.4
SMG7-201ENST00000347615 A0A087X002 238 aa6.31□□□□□ -1.4
SMG7-201ENST00000347615 KRTAP4-16G5E9R7 235 aaPredicted RBP6.31□□□□□ -1.4
SMG7-201ENST00000347615 NOTCH2NLQ7Z3S9 236 aa6.31□□□□□ -1.4
SMG7-201ENST00000347615 NBPF19A0A087WUL8 3843 aa6.3□□□□□ -1.4
SMG7-201ENST00000347615 A8MU10 97 aa6.3□□□□□ -1.4
SMG7-201ENST00000347615 Q5W150 140 aa6.29□□□□□ -1.4
SMG7-201ENST00000347615 KRTAP7-1Q8IUC3 87 aa6.29□□□□□ -1.4
SMG7-201ENST00000347615 CSMD2Q7Z408 3487 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms