RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
LMNA-201ENST00000347559 REG3GQ6UW15 175 aa9.7□□□□□ -0.86
LMNA-201ENST00000347559 ATP11AUNQ6ZP68 121 aa9.7□□□□□ -0.86
LMNA-201ENST00000347559 SMR3AQ99954 134 aa9.69□□□□□ -0.86
LMNA-201ENST00000347559 ITPR2Q14571 2701 aa9.69□□□□□ -0.86
LMNA-201ENST00000347559 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
LMNA-201ENST00000347559 OTOGQ6ZRI0 2925 aa9.67□□□□□ -0.86
LMNA-201ENST00000347559 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
LMNA-201ENST00000347559 SPAG11AQ6PDA7 123 aa9.67□□□□□ -0.86
LMNA-201ENST00000347559 Q75L30 129 aa9.67□□□□□ -0.86
LMNA-201ENST00000347559 LINC01556Q5JQF7 62 aa9.67□□□□□ -0.86
LMNA-201ENST00000347559 A0A096LNI7 61 aa9.66□□□□□ -0.86
LMNA-201ENST00000347559 ANK3Q12955 4377 aaKnown RBP9.66□□□□□ -0.86
LMNA-201ENST00000347559 H0Y9J4 135 aa9.65□□□□□ -0.86
LMNA-201ENST00000347559 TLX1NBP0CAT3 122 aa9.65□□□□□ -0.86
LMNA-201ENST00000347559 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
LMNA-201ENST00000347559 IGLV5-37A0A075B6J1 123 aa9.64□□□□□ -0.87
LMNA-201ENST00000347559 H3BPC8 53 aa9.64□□□□□ -0.87
LMNA-201ENST00000347559 C9orf163Q8N9P6 203 aa9.64□□□□□ -0.87
LMNA-201ENST00000347559 A6NN06 94 aa9.63□□□□□ -0.87
LMNA-201ENST00000347559 NDUFS5O43920 106 aa9.63□□□□□ -0.87
LMNA-201ENST00000347559 TENM3Q9P273 2699 aa9.63□□□□□ -0.87
LMNA-201ENST00000347559 IGKV2-24A0A0C4DH68 120 aa9.62□□□□□ -0.87
LMNA-201ENST00000347559 LOC101927531A0A1B0GV80 90 aa9.62□□□□□ -0.87
LMNA-201ENST00000347559 H3BNG1 76 aa9.61□□□□□ -0.87
LMNA-201ENST00000347559 TRRAPQ9Y4A5 3859 aa9.61□□□□□ -0.87
LMNA-201ENST00000347559 CDC42SE1Q9NRR8 79 aa9.6□□□□□ -0.87
LMNA-201ENST00000347559 DEFB131BA0A096LNP1 70 aa9.6□□□□□ -0.87
LMNA-201ENST00000347559 A8MWP4 228 aa9.6□□□□□ -0.87
LMNA-201ENST00000347559 FASNP49327 2511 aaKnown RBP9.58□□□□□ -0.88
LMNA-201ENST00000347559 IGLV7-46A0A075B6I9 117 aa9.58□□□□□ -0.88
LMNA-201ENST00000347559 MOBPQ13875 183 aa9.57□□□□□ -0.88
LMNA-201ENST00000347559 PHF5AQ7RTV0 110 aaKnown RBP9.57□□□□□ -0.88
LMNA-201ENST00000347559 SPINK7P58062 85 aa9.55□□□□□ -0.88
LMNA-201ENST00000347559 C7orf65Q6ZTY9 151 aa9.55□□□□□ -0.88
LMNA-201ENST00000347559 LINC00472Q9H8W2 130 aa9.53□□□□□ -0.88
LMNA-201ENST00000347559 IGLV8-61A0A075B6I0 122 aa9.53□□□□□ -0.88
LMNA-201ENST00000347559 DNAH10OSP0CZ25 163 aa9.53□□□□□ -0.88
LMNA-201ENST00000347559 FLNBO75369 2602 aaKnown RBP9.52□□□□□ -0.88
LMNA-201ENST00000347559 MMP24-AS1A0A0U1RRL7 71 aa9.52□□□□□ -0.89
LMNA-201ENST00000347559 OXLD1Q5BKU9 147 aa9.51□□□□□ -0.89
LMNA-201ENST00000347559 C11orf45Q8TAV5 145 aa9.51□□□□□ -0.89
LMNA-201ENST00000347559 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
LMNA-201ENST00000347559 FBN1P35555 2871 aaKnown RBP9.48□□□□□ -0.89
LMNA-201ENST00000347559 HELZ2Q9BYK8 2649 aaKnown RBP9.48□□□□□ -0.89
LMNA-201ENST00000347559 TENM4Q6N022 2769 aa9.46□□□□□ -0.9
LMNA-201ENST00000347559 HRES1P13985 223 aa9.45□□□□□ -0.9
LMNA-201ENST00000347559 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
LMNA-201ENST00000347559 PRAC1Q96KF2 57 aa9.44□□□□□ -0.9
LMNA-201ENST00000347559 MAST4O15021 2626 aa9.43□□□□□ -0.9
LMNA-201ENST00000347559 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
LMNA-201ENST00000347559 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
LMNA-201ENST00000347559 PLAC8Q9NZF1 115 aa9.41□□□□□ -0.9
LMNA-201ENST00000347559 PRR26Q8N8Z3 221 aa9.41□□□□□ -0.9
LMNA-201ENST00000347559 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
LMNA-201ENST00000347559 KRTAP10-11P60412 298 aa9.4□□□□□ -0.9
LMNA-201ENST00000347559 TENM2Q9NT68 2774 aa9.4□□□□□ -0.91
LMNA-201ENST00000347559 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
LMNA-201ENST00000347559 IGLV9-49A0A0B4J1Y8 123 aa9.39□□□□□ -0.91
LMNA-201ENST00000347559 TP53AIP1Q9HCN2 124 aa9.39□□□□□ -0.91
LMNA-201ENST00000347559 LINC00313P59037 77 aa9.38□□□□□ -0.91
LMNA-201ENST00000347559 NSD1Q96L73 2696 aaPredicted RBP9.38□□□□□ -0.91
LMNA-201ENST00000347559 COL6A5A8TX70 2615 aa9.37□□□□□ -0.91
LMNA-201ENST00000347559 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
LMNA-201ENST00000347559 CSMD3Q7Z407 3707 aa9.37□□□□□ -0.91
LMNA-201ENST00000347559 C8orf87E5RJ46 101 aa9.36□□□□□ -0.91
LMNA-201ENST00000347559 HECTD1Q9ULT8 2610 aa9.36□□□□□ -0.91
LMNA-201ENST00000347559 COL7A1Q02388 2944 aa9.36□□□□□ -0.91
LMNA-201ENST00000347559 ADM2Q7Z4H4 148 aa9.35□□□□□ -0.91
LMNA-201ENST00000347559 SPRR1BP22528 89 aa9.34□□□□□ -0.92
LMNA-201ENST00000347559 Q6ZR54 194 aa9.33□□□□□ -0.92
LMNA-201ENST00000347559 K7EIL1 84 aa9.32□□□□□ -0.92
LMNA-201ENST00000347559 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
LMNA-201ENST00000347559 Q96NJ1 140 aa9.31□□□□□ -0.92
LMNA-201ENST00000347559 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
LMNA-201ENST00000347559 A0A087X002 238 aa9.28□□□□□ -0.92
LMNA-201ENST00000347559 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
LMNA-201ENST00000347559 NBEAL1Q6ZS30 2694 aa9.28□□□□□ -0.92
LMNA-201ENST00000347559 MRPL34Q9BQ48 92 aaKnown RBP9.27□□□□□ -0.92
LMNA-201ENST00000347559 ASB16-AS1Q495Z4 193 aa9.27□□□□□ -0.93
LMNA-201ENST00000347559 A0A1B0GVX0 72 aa9.27□□□□□ -0.93
LMNA-201ENST00000347559 STAB1Q9NY15 2570 aa9.26□□□□□ -0.93
LMNA-201ENST00000347559 KRTAP1-5Q9BYS1 174 aa9.25□□□□□ -0.93
LMNA-201ENST00000347559 MDFIQ99750 246 aa9.24□□□□□ -0.93
LMNA-201ENST00000347559 SPINK6Q6UWN8 80 aa9.22□□□□□ -0.93
LMNA-201ENST00000347559 ANK2Q01484 3957 aa9.22□□□□□ -0.93
LMNA-201ENST00000347559 Q5W150 140 aa9.21□□□□□ -0.94
LMNA-201ENST00000347559 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
LMNA-201ENST00000347559 ANAPC11Q9NYG5 84 aa9.19□□□□□ -0.94
LMNA-201ENST00000347559 ACYP2P14621 99 aa9.18□□□□□ -0.94
LMNA-201ENST00000347559 LINC01554Q52M75 96 aa9.18□□□□□ -0.94
LMNA-201ENST00000347559 A0A1B0GU69 56 aa9.17□□□□□ -0.94
LMNA-201ENST00000347559 PANO1I0J062 215 aa9.17□□□□□ -0.94
LMNA-201ENST00000347559 PLA2G1BP04054 148 aaKnown RBP9.14□□□□□ -0.95
LMNA-201ENST00000347559 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
LMNA-201ENST00000347559 KMT2BQ9UMN6 2715 aaPredicted RBP9.14□□□□□ -0.95
LMNA-201ENST00000347559 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
LMNA-201ENST00000347559 H3BS24 57 aa9.11□□□□□ -0.95
LMNA-201ENST00000347559 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
LMNA-201ENST00000347559 DNAH1Q9P2D7 4330 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms