RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
TSPAN4-201ENST00000346501 CEND1Q8N111 149 aa8.87□□□□□ -0.99
TSPAN4-201ENST00000346501 H0YGX0 51 aa8.86□□□□□ -0.99
TSPAN4-201ENST00000346501 KRTAP13-3Q3SY46 172 aa8.86□□□□□ -0.99
TSPAN4-201ENST00000346501 PPDPFLQ8WWR9 84 aa8.86□□□□□ -0.99
TSPAN4-201ENST00000346501 C2orf91Q6ZV80 131 aa8.85□□□□□ -0.99
TSPAN4-201ENST00000346501 SNHG12Q9BXW3 62 aa8.85□□□□□ -0.99
TSPAN4-201ENST00000346501 GHRHP01286 108 aa8.84□□□□□ -0.99
TSPAN4-201ENST00000346501 OCIAD2Q56VL3 154 aa8.84□□□□□ -0.99
TSPAN4-201ENST00000346501 PYY3Q5JQD4 70 aa8.84□□□□□ -0.99
TSPAN4-201ENST00000346501 Q6JHZ5 121 aa8.84□□□□□ -0.99
TSPAN4-201ENST00000346501 PRO1854Q9UHT4 67 aa8.84□□□□□ -0.99
TSPAN4-201ENST00000346501 TCL1BO95988 128 aa8.82□□□□□ -1
TSPAN4-201ENST00000346501 HSD52Q0P140 79 aa8.81□□□□□ -1
TSPAN4-201ENST00000346501 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
TSPAN4-201ENST00000346501 Q5XG85 94 aa8.8□□□□□ -1
TSPAN4-201ENST00000346501 UQCR10Q9UDW1 63 aa8.79□□□□□ -1
TSPAN4-201ENST00000346501 FXYD2P54710 66 aa8.78□□□□□ -1
TSPAN4-201ENST00000346501 CLEC2BQ92478 149 aa8.78□□□□□ -1
TSPAN4-201ENST00000346501 A0A1B0GX51 115 aa8.77□□□□□ -1.01
TSPAN4-201ENST00000346501 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
TSPAN4-201ENST00000346501 A0A0G2JQZ4 141 aa8.76□□□□□ -1.01
TSPAN4-201ENST00000346501 COX6CP09669 75 aa8.76□□□□□ -1.01
TSPAN4-201ENST00000346501 SMIM6P0DI80 62 aa8.75□□□□□ -1.01
TSPAN4-201ENST00000346501 PSMB2P49721 201 aa8.75□□□□□ -1.01
TSPAN4-201ENST00000346501 ASB16-AS1Q495Z4 193 aa8.74□□□□□ -1.01
TSPAN4-201ENST00000346501 DNAL4O96015 105 aa8.73□□□□□ -1.01
TSPAN4-201ENST00000346501 C1orf195Q5TG92 126 aa8.72□□□□□ -1.01
TSPAN4-201ENST00000346501 IGFL1Q6UW32 110 aa8.72□□□□□ -1.01
TSPAN4-201ENST00000346501 FABP2P12104 132 aa8.71□□□□□ -1.02
TSPAN4-201ENST00000346501 XP32Q5T750 250 aa8.71□□□□□ -1.02
TSPAN4-201ENST00000346501 TRBV7-7A0A0K0K1E9 115 aa8.7□□□□□ -1.02
TSPAN4-201ENST00000346501 C9orf92A6NGG3 77 aa8.7□□□□□ -1.02
TSPAN4-201ENST00000346501 H3BQ85 93 aa8.7□□□□□ -1.02
TSPAN4-201ENST00000346501 TRIAP1O43715 76 aa8.7□□□□□ -1.02
TSPAN4-201ENST00000346501 NDUFV3P56181 108 aaKnown RBP8.7□□□□□ -1.02
TSPAN4-201ENST00000346501 FAM218AQ96MZ4 157 aa8.7□□□□□ -1.02
TSPAN4-201ENST00000346501 MUC2Q02817 5179 aa8.68□□□□□ -1.02
TSPAN4-201ENST00000346501 H3BUT2 72 aa8.68□□□□□ -1.02
TSPAN4-201ENST00000346501 SS18L2Q9UHA2 77 aa8.67□□□□□ -1.02
TSPAN4-201ENST00000346501 H3BMG7 143 aa8.66□□□□□ -1.02
TSPAN4-201ENST00000346501 K7ERJ3 54 aa8.66□□□□□ -1.02
TSPAN4-201ENST00000346501 ORMDL1Q9P0S3 153 aa8.66□□□□□ -1.02
TSPAN4-201ENST00000346501 LST1O00453 97 aa8.64□□□□□ -1.03
TSPAN4-201ENST00000346501 SCGB1C2P0DMR2 95 aa8.64□□□□□ -1.03
TSPAN4-201ENST00000346501 TEN1Q86WV5 123 aa8.64□□□□□ -1.03
TSPAN4-201ENST00000346501 TMEM256-PLSCR3K7ERE1 68 aa8.62□□□□□ -1.03
TSPAN4-201ENST00000346501 M0R143 59 aa8.62□□□□□ -1.03
TSPAN4-201ENST00000346501 Q6Q795 121 aa8.62□□□□□ -1.03
TSPAN4-201ENST00000346501 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
TSPAN4-201ENST00000346501 MUC17Q685J3 4493 aa8.56□□□□□ -1.04
TSPAN4-201ENST00000346501 A0A087WSZ3 146 aa8.56□□□□□ -1.04
TSPAN4-201ENST00000346501 TRACP01848 142 aa8.56□□□□□ -1.04
TSPAN4-201ENST00000346501 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
TSPAN4-201ENST00000346501 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
TSPAN4-201ENST00000346501 TSTD3H0UI37 97 aa8.53□□□□□ -1.04
TSPAN4-201ENST00000346501 A0A1B0GV72 72 aa8.52□□□□□ -1.05
TSPAN4-201ENST00000346501 RPL37P61927 97 aaKnown RBP8.52□□□□□ -1.05
TSPAN4-201ENST00000346501 TRBV7-4A0A0J9YYF1 115 aa8.51□□□□□ -1.05
TSPAN4-201ENST00000346501 OBSCN-AS1Q96MR7 158 aa8.5□□□□□ -1.05
TSPAN4-201ENST00000346501 LYRM7Q5U5X0 104 aa8.49□□□□□ -1.05
TSPAN4-201ENST00000346501 A0A1W2PNM2 257 aa8.48□□□□□ -1.05
TSPAN4-201ENST00000346501 CCKP06307 115 aa8.48□□□□□ -1.05
TSPAN4-201ENST00000346501 RBM3P98179 157 aaKnown RBP8.48□□□□□ -1.05
TSPAN4-201ENST00000346501 DSCR8Q96T75 97 aa8.48□□□□□ -1.05
TSPAN4-201ENST00000346501 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
TSPAN4-201ENST00000346501 BAALC-AS2P0C853 105 aa8.47□□□□□ -1.05
TSPAN4-201ENST00000346501 ATXN8Q156A1 80 aa8.47□□□□□ -1.05
TSPAN4-201ENST00000346501 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
TSPAN4-201ENST00000346501 SIGMAR1Q99720 223 aa8.47□□□□□ -1.05
TSPAN4-201ENST00000346501 PCP4L1A6NKN8 68 aa8.46□□□□□ -1.06
TSPAN4-201ENST00000346501 C21orf62-AS1Q17RA5 79 aa8.45□□□□□ -1.06
TSPAN4-201ENST00000346501 Q96NJ1 140 aa8.45□□□□□ -1.06
TSPAN4-201ENST00000346501 VPS25Q9BRG1 176 aa8.45□□□□□ -1.06
TSPAN4-201ENST00000346501 LCE2AQ5TA79 106 aaPredicted RBP8.44□□□□□ -1.06
TSPAN4-201ENST00000346501 Q75L30 129 aa8.43□□□□□ -1.06
TSPAN4-201ENST00000346501 C9JAW5 83 aa8.42□□□□□ -1.06
TSPAN4-201ENST00000346501 IGKV4-1P06312 121 aa8.42□□□□□ -1.06
TSPAN4-201ENST00000346501 BATFQ16520 125 aa8.42□□□□□ -1.06
TSPAN4-201ENST00000346501 NAA38Q9BRA0 125 aaKnown RBP8.41□□□□□ -1.06
TSPAN4-201ENST00000346501 FAT4Q6V0I7 4981 aa8.4□□□□□ -1.06
TSPAN4-201ENST00000346501 JMJD7-PLA2G4BH0Y9G9 81 aa8.4□□□□□ -1.06
TSPAN4-201ENST00000346501 TRBV20-1A0A075B6N2 111 aa8.39□□□□□ -1.07
TSPAN4-201ENST00000346501 LINC00313P59037 77 aa8.37□□□□□ -1.07
TSPAN4-201ENST00000346501 PDE6GP18545 87 aa8.36□□□□□ -1.07
TSPAN4-201ENST00000346501 DSCR10P59022 87 aa8.35□□□□□ -1.07
TSPAN4-201ENST00000346501 COX6B2Q6YFQ2 88 aa8.35□□□□□ -1.07
TSPAN4-201ENST00000346501 KRTAP9-2Q9BYQ4 174 aa8.35□□□□□ -1.07
TSPAN4-201ENST00000346501 C20orf166-AS1Q96NR2 134 aa8.34□□□□□ -1.07
TSPAN4-201ENST00000346501 DEFB116Q30KQ4 102 aa8.33□□□□□ -1.08
TSPAN4-201ENST00000346501 LINC00472Q9H8W2 130 aa8.33□□□□□ -1.08
TSPAN4-201ENST00000346501 A0A1B0GW54 56 aa8.32□□□□□ -1.08
TSPAN4-201ENST00000346501 J3KT08 172 aa8.32□□□□□ -1.08
TSPAN4-201ENST00000346501 A8MUU9 505 aa8.31□□□□□ -1.08
TSPAN4-201ENST00000346501 IGHV6-1A0A0B4J1U7 121 aa8.3□□□□□ -1.08
TSPAN4-201ENST00000346501 LOC110117498A0A087WWA1 95 aa8.29□□□□□ -1.08
TSPAN4-201ENST00000346501 C9orf118A6NHY6 69 aa8.29□□□□□ -1.08
TSPAN4-201ENST00000346501 NDUFB1O75438 58 aa8.29□□□□□ -1.08
TSPAN4-201ENST00000346501 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
TSPAN4-201ENST00000346501 Q6ZQT0 140 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms