RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 HTTP42858 3142 aa10.68□□□□□ -0.7
SPAST-202ENST00000345662 AKAP13Q12802 2813 aa10.66□□□□□ -0.7
SPAST-202ENST00000345662 KRTAP26-1Q6PEX3 210 aa10.65□□□□□ -0.71
SPAST-202ENST00000345662 DMAC1Q96GE9 116 aa10.63□□□□□ -0.71
SPAST-202ENST00000345662 SMR3BP02814 79 aaPredicted RBP10.62□□□□□ -0.71
SPAST-202ENST00000345662 KRTAP29-1A8MX34 341 aaPredicted RBP10.61□□□□□ -0.71
SPAST-202ENST00000345662 ASB16-AS1Q495Z4 193 aa10.6□□□□□ -0.71
SPAST-202ENST00000345662 MAST4O15021 2626 aa10.59□□□□□ -0.71
SPAST-202ENST00000345662 CHD6Q8TD26 2715 aa10.59□□□□□ -0.71
SPAST-202ENST00000345662 RANBP2P49792 3224 aaKnown RBP10.58□□□□□ -0.72
SPAST-202ENST00000345662 TRANK1O15050 2925 aa10.58□□□□□ -0.72
SPAST-202ENST00000345662 Q6ZR54 194 aa10.58□□□□□ -0.72
SPAST-202ENST00000345662 LAMA2P24043 3122 aaKnown RBP10.56□□□□□ -0.72
SPAST-202ENST00000345662 KRTAP4-16G5E9R7 235 aaPredicted RBP10.56□□□□□ -0.72
SPAST-202ENST00000345662 PLAC8Q9NZF1 115 aa10.55□□□□□ -0.72
SPAST-202ENST00000345662 COX6B2Q6YFQ2 88 aa10.53□□□□□ -0.72
SPAST-202ENST00000345662 MGAQ8IWI9 3026 aa10.52□□□□□ -0.72
SPAST-202ENST00000345662 CFAP46Q8IYW2 2715 aa10.51□□□□□ -0.73
SPAST-202ENST00000345662 GCN1Q92616 2671 aaKnown RBP10.49□□□□□ -0.73
SPAST-202ENST00000345662 A6NN06 94 aa10.49□□□□□ -0.73
SPAST-202ENST00000345662 LCE6AA0A183 80 aa10.48□□□□□ -0.73
SPAST-202ENST00000345662 UNC79Q9P2D8 2635 aa10.48□□□□□ -0.73
SPAST-202ENST00000345662 HELZ2Q9BYK8 2649 aaKnown RBP10.47□□□□□ -0.73
SPAST-202ENST00000345662 MKI67P46013 3256 aaKnown RBP10.45□□□□□ -0.74
SPAST-202ENST00000345662 SPATA8Q6RVD6 105 aa10.42□□□□□ -0.74
SPAST-202ENST00000345662 ROMO1P60602 79 aa10.41□□□□□ -0.74
SPAST-202ENST00000345662 KRTAP1-5Q9BYS1 174 aa10.4□□□□□ -0.74
SPAST-202ENST00000345662 LINC00483Q53H64 154 aa10.4□□□□□ -0.74
SPAST-202ENST00000345662 RPL37P61927 97 aaKnown RBP10.4□□□□□ -0.75
SPAST-202ENST00000345662 NBEAL1Q6ZS30 2694 aa10.39□□□□□ -0.75
SPAST-202ENST00000345662 LAMA3Q16787 3333 aa10.39□□□□□ -0.75
SPAST-202ENST00000345662 ZNF292O60281 2723 aa10.38□□□□□ -0.75
SPAST-202ENST00000345662 H1FX-AS1Q4G0G2 97 aa10.37□□□□□ -0.75
SPAST-202ENST00000345662 CAMK2N1Q7Z7J9 78 aa10.36□□□□□ -0.75
SPAST-202ENST00000345662 A0A0A0MQY5 61 aa10.35□□□□□ -0.75
SPAST-202ENST00000345662 J3QL48 77 aa10.35□□□□□ -0.75
SPAST-202ENST00000345662 S4R3F8 94 aa10.35□□□□□ -0.75
SPAST-202ENST00000345662 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
SPAST-202ENST00000345662 Q6ZSA8 131 aa10.33□□□□□ -0.76
SPAST-202ENST00000345662 TRIOO75962 3097 aa10.3□□□□□ -0.76
SPAST-202ENST00000345662 NOTCH1P46531 2555 aa10.3□□□□□ -0.76
SPAST-202ENST00000345662 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
SPAST-202ENST00000345662 A8MU10 97 aa10.29□□□□□ -0.76
SPAST-202ENST00000345662 TEX15Q9BXT5 2789 aa10.27□□□□□ -0.76
SPAST-202ENST00000345662 MAP1AP78559 2803 aaPredicted RBP10.27□□□□□ -0.76
SPAST-202ENST00000345662 STAB1Q9NY15 2570 aa10.27□□□□□ -0.77
SPAST-202ENST00000345662 FRYQ5TBA9 3013 aa10.26□□□□□ -0.77
SPAST-202ENST00000345662 BRCA2P51587 3418 aa10.25□□□□□ -0.77
SPAST-202ENST00000345662 A0A087X002 238 aa10.24□□□□□ -0.77
SPAST-202ENST00000345662 NOTCH2NLQ7Z3S9 236 aa10.24□□□□□ -0.77
SPAST-202ENST00000345662 VPS13AQ96RL7 3174 aa10.23□□□□□ -0.77
SPAST-202ENST00000345662 ADM2Q7Z4H4 148 aa10.2□□□□□ -0.78
SPAST-202ENST00000345662 KRTAP25-1Q3LHN0 102 aa10.2□□□□□ -0.78
SPAST-202ENST00000345662 PANO1I0J062 215 aa10.2□□□□□ -0.78
SPAST-202ENST00000345662 UNC80Q8N2C7 3258 aa10.19□□□□□ -0.78
SPAST-202ENST00000345662 FREM2Q5SZK8 3169 aa10.19□□□□□ -0.78
SPAST-202ENST00000345662 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
SPAST-202ENST00000345662 DSPP15924 2871 aaKnown RBP10.17□□□□□ -0.78
SPAST-202ENST00000345662 DMBT1Q9UGM3 2413 aaPredicted RBP10.17□□□□□ -0.78
SPAST-202ENST00000345662 TEP1Q99973 2627 aaKnown RBP10.16□□□□□ -0.78
SPAST-202ENST00000345662 R4GN34 69 aa10.16□□□□□ -0.78
SPAST-202ENST00000345662 PRUNE2Q8WUY3 3088 aa10.13□□□□□ -0.79
SPAST-202ENST00000345662 KRTAP7-1Q8IUC3 87 aa10.13□□□□□ -0.79
SPAST-202ENST00000345662 COL6A5A8TX70 2615 aa10.12□□□□□ -0.79
SPAST-202ENST00000345662 SETXQ7Z333 2677 aaKnown RBP10.11□□□□□ -0.79
SPAST-202ENST00000345662 XIRP2A4UGR9 3374 aa10.11□□□□□ -0.79
SPAST-202ENST00000345662 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
SPAST-202ENST00000345662 NBEAQ8NFP9 2946 aa10.1□□□□□ -0.79
SPAST-202ENST00000345662 KRTAP16-1A8MUX0 517 aa10.07□□□□□ -0.8
SPAST-202ENST00000345662 KALRNO60229 2985 aa10.06□□□□□ -0.8
SPAST-202ENST00000345662 UBR5O95071 2799 aaPredicted RBP10.05□□□□□ -0.8
SPAST-202ENST00000345662 KRTAP10-1P60331 282 aa10.01□□□□□ -0.81
SPAST-202ENST00000345662 ITPR1Q14643 2758 aa9.99□□□□□ -0.81
SPAST-202ENST00000345662 KRTAP10-2P60368 255 aa9.99□□□□□ -0.81
SPAST-202ENST00000345662 M0QZ58 72 aa9.99□□□□□ -0.81
SPAST-202ENST00000345662 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
SPAST-202ENST00000345662 IGSF10Q6WRI0 2623 aa9.96□□□□□ -0.81
SPAST-202ENST00000345662 CELSR3Q9NYQ7 3312 aa9.95□□□□□ -0.82
SPAST-202ENST00000345662 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
SPAST-202ENST00000345662 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
SPAST-202ENST00000345662 CDH23Q9H251 3354 aa9.9□□□□□ -0.82
SPAST-202ENST00000345662 NDUFAF8A1L188 74 aa9.89□□□□□ -0.83
SPAST-202ENST00000345662 LAMA1P25391 3075 aa9.86□□□□□ -0.83
SPAST-202ENST00000345662 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
SPAST-202ENST00000345662 NSD1Q96L73 2696 aaPredicted RBP9.83□□□□□ -0.84
SPAST-202ENST00000345662 VCANP13611 3396 aa9.82□□□□□ -0.84
SPAST-202ENST00000345662 ADGRG4Q8IZF6 3080 aa9.82□□□□□ -0.84
SPAST-202ENST00000345662 RPS29P62273 56 aaKnown RBP9.82□□□□□ -0.84
SPAST-202ENST00000345662 SEC61BP60468 96 aaKnown RBP9.8□□□□□ -0.84
SPAST-202ENST00000345662 A8MUU9 505 aa9.79□□□□□ -0.84
SPAST-202ENST00000345662 ASH1LQ9NR48 2969 aaKnown RBP9.79□□□□□ -0.84
SPAST-202ENST00000345662 FLNCQ14315 2725 aa9.78□□□□□ -0.84
SPAST-202ENST00000345662 ATMQ13315 3056 aa9.78□□□□□ -0.84
SPAST-202ENST00000345662 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.84
SPAST-202ENST00000345662 M0R2T5 61 aa9.77□□□□□ -0.85
SPAST-202ENST00000345662 APCP25054 2843 aa9.77□□□□□ -0.85
SPAST-202ENST00000345662 DNAH14Q0VDD8 3507 aa9.76□□□□□ -0.85
SPAST-202ENST00000345662 DMXL2Q8TDJ6 3036 aa9.75□□□□□ -0.85
SPAST-202ENST00000345662 TACC2O95359 2948 aa9.74□□□□□ -0.85
SPAST-202ENST00000345662 ITPR2Q14571 2701 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms