RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 SPRR1AP35321 89 aa9.11□□□□□ -0.95
CUL3-202ENST00000344951 ROMO1P60602 79 aa9.09□□□□□ -0.95
CUL3-202ENST00000344951 LINC00472Q9H8W2 130 aa9.07□□□□□ -0.96
CUL3-202ENST00000344951 PLAC8Q9NZF1 115 aa9.07□□□□□ -0.96
CUL3-202ENST00000344951 RPL37P61927 97 aaKnown RBP9.04□□□□□ -0.96
CUL3-202ENST00000344951 PCNTO95613 3336 aa9.04□□□□□ -0.96
CUL3-202ENST00000344951 USP24Q9UPU5 2620 aa9.03□□□□□ -0.96
CUL3-202ENST00000344951 FASNP49327 2511 aaKnown RBP9.02□□□□□ -0.97
CUL3-202ENST00000344951 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
CUL3-202ENST00000344951 KRTAP10-2P60368 255 aa9.02□□□□□ -0.97
CUL3-202ENST00000344951 C20orf166-AS1Q96NR2 134 aa8.99□□□□□ -0.97
CUL3-202ENST00000344951 KRTAP26-1Q6PEX3 210 aa8.97□□□□□ -0.97
CUL3-202ENST00000344951 SPRR1BP22528 89 aa8.96□□□□□ -0.97
CUL3-202ENST00000344951 KRTAP1-5Q9BYS1 174 aa8.91□□□□□ -0.98
CUL3-202ENST00000344951 CHD7Q9P2D1 2997 aa8.91□□□□□ -0.98
CUL3-202ENST00000344951 FLG2Q5D862 2391 aaPredicted RBP8.9□□□□□ -0.98
CUL3-202ENST00000344951 MGAM2Q2M2H8 2515 aa8.89□□□□□ -0.99
CUL3-202ENST00000344951 A0A0C4DFX4 3053 aa8.88□□□□□ -0.99
CUL3-202ENST00000344951 Q6ZR54 194 aa8.86□□□□□ -0.99
CUL3-202ENST00000344951 LCE6AA0A183 80 aa8.84□□□□□ -0.99
CUL3-202ENST00000344951 A8MU10 97 aa8.81□□□□□ -1
CUL3-202ENST00000344951 EPG5Q9HCE0 2579 aa8.81□□□□□ -1
CUL3-202ENST00000344951 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
CUL3-202ENST00000344951 CFAP54Q96N23 3096 aa8.79□□□□□ -1
CUL3-202ENST00000344951 KRTAP4-16G5E9R7 235 aaPredicted RBP8.79□□□□□ -1
CUL3-202ENST00000344951 PANO1I0J062 215 aa8.78□□□□□ -1
CUL3-202ENST00000344951 A0A087X002 238 aa8.75□□□□□ -1.01
CUL3-202ENST00000344951 FLNAP21333 2647 aaKnown RBP8.74□□□□□ -1.01
CUL3-202ENST00000344951 A8MUU9 505 aa8.74□□□□□ -1.01
CUL3-202ENST00000344951 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
CUL3-202ENST00000344951 HECTD1Q9ULT8 2610 aa8.73□□□□□ -1.01
CUL3-202ENST00000344951 MKI67P46013 3256 aaKnown RBP8.71□□□□□ -1.01
CUL3-202ENST00000344951 XIRP2A4UGR9 3374 aa8.7□□□□□ -1.02
CUL3-202ENST00000344951 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
CUL3-202ENST00000344951 CHD9Q3L8U1 2897 aa8.69□□□□□ -1.02
CUL3-202ENST00000344951 C10orf95Q9H7T3 257 aa8.69□□□□□ -1.02
CUL3-202ENST00000344951 ITPR3Q14573 2671 aa8.67□□□□□ -1.02
CUL3-202ENST00000344951 HTTP42858 3142 aa8.66□□□□□ -1.02
CUL3-202ENST00000344951 A6NN06 94 aa8.65□□□□□ -1.02
CUL3-202ENST00000344951 ASB16-AS1Q495Z4 193 aa8.64□□□□□ -1.03
CUL3-202ENST00000344951 NDUFAF8A1L188 74 aa8.61□□□□□ -1.03
CUL3-202ENST00000344951 BRCA2P51587 3418 aa8.6□□□□□ -1.03
CUL3-202ENST00000344951 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
CUL3-202ENST00000344951 ATRQ13535 2644 aa8.6□□□□□ -1.03
CUL3-202ENST00000344951 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
CUL3-202ENST00000344951 LAMA2P24043 3122 aaKnown RBP8.55□□□□□ -1.04
CUL3-202ENST00000344951 KRTAP25-1Q3LHN0 102 aa8.54□□□□□ -1.04
CUL3-202ENST00000344951 FLNBO75369 2602 aaKnown RBP8.53□□□□□ -1.04
CUL3-202ENST00000344951 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
CUL3-202ENST00000344951 TRIOO75962 3097 aa8.52□□□□□ -1.05
CUL3-202ENST00000344951 MGAQ8IWI9 3026 aa8.52□□□□□ -1.05
CUL3-202ENST00000344951 LAMA3Q16787 3333 aa8.49□□□□□ -1.05
CUL3-202ENST00000344951 RANBP2P49792 3224 aaKnown RBP8.48□□□□□ -1.05
CUL3-202ENST00000344951 CHD6Q8TD26 2715 aa8.48□□□□□ -1.05
CUL3-202ENST00000344951 TNP1P09430 55 aa8.48□□□□□ -1.05
CUL3-202ENST00000344951 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
CUL3-202ENST00000344951 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
CUL3-202ENST00000344951 MAST4O15021 2626 aa8.44□□□□□ -1.06
CUL3-202ENST00000344951 CELSR3Q9NYQ7 3312 aa8.44□□□□□ -1.06
CUL3-202ENST00000344951 TRANK1O15050 2925 aa8.43□□□□□ -1.06
CUL3-202ENST00000344951 AKAP13Q12802 2813 aa8.42□□□□□ -1.06
CUL3-202ENST00000344951 CFAP46Q8IYW2 2715 aa8.41□□□□□ -1.06
CUL3-202ENST00000344951 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.06
CUL3-202ENST00000344951 UNC80Q8N2C7 3258 aa8.4□□□□□ -1.06
CUL3-202ENST00000344951 FREM2Q5SZK8 3169 aa8.39□□□□□ -1.07
CUL3-202ENST00000344951 WDFY4Q6ZS81 3184 aa8.36□□□□□ -1.07
CUL3-202ENST00000344951 PRUNE2Q8WUY3 3088 aa8.36□□□□□ -1.07
CUL3-202ENST00000344951 CENPEQ02224 2701 aa8.35□□□□□ -1.07
CUL3-202ENST00000344951 CDH23Q9H251 3354 aa8.34□□□□□ -1.07
CUL3-202ENST00000344951 HELZ2Q9BYK8 2649 aaKnown RBP8.34□□□□□ -1.07
CUL3-202ENST00000344951 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
CUL3-202ENST00000344951 FRYQ5TBA9 3013 aa8.33□□□□□ -1.08
CUL3-202ENST00000344951 UNC79Q9P2D8 2635 aa8.32□□□□□ -1.08
CUL3-202ENST00000344951 KRTAP13-2Q52LG2 175 aa8.32□□□□□ -1.08
CUL3-202ENST00000344951 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
CUL3-202ENST00000344951 NBEAL1Q6ZS30 2694 aa8.32□□□□□ -1.08
CUL3-202ENST00000344951 DNAH14Q0VDD8 3507 aa8.32□□□□□ -1.08
CUL3-202ENST00000344951 NBEAL2Q6ZNJ1 2754 aa8.32□□□□□ -1.08
CUL3-202ENST00000344951 STAB1Q9NY15 2570 aa8.31□□□□□ -1.08
CUL3-202ENST00000344951 SZT2Q5T011 3432 aa8.3□□□□□ -1.08
CUL3-202ENST00000344951 TEX15Q9BXT5 2789 aa8.25□□□□□ -1.09
CUL3-202ENST00000344951 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
CUL3-202ENST00000344951 VPS13AQ96RL7 3174 aa8.24□□□□□ -1.09
CUL3-202ENST00000344951 STAB2Q8WWQ8 2551 aa8.21□□□□□ -1.09
CUL3-202ENST00000344951 KALRNO60229 2985 aa8.19□□□□□ -1.1
CUL3-202ENST00000344951 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
CUL3-202ENST00000344951 DSPP15924 2871 aaKnown RBP8.14□□□□□ -1.11
CUL3-202ENST00000344951 VCANP13611 3396 aa8.13□□□□□ -1.11
CUL3-202ENST00000344951 ZNF292O60281 2723 aa8.13□□□□□ -1.11
CUL3-202ENST00000344951 P0C880 135 aa8.11□□□□□ -1.11
CUL3-202ENST00000344951 SETXQ7Z333 2677 aaKnown RBP8.09□□□□□ -1.11
CUL3-202ENST00000344951 MAP1AP78559 2803 aaPredicted RBP8.09□□□□□ -1.11
CUL3-202ENST00000344951 NOTCH1P46531 2555 aa8.07□□□□□ -1.12
CUL3-202ENST00000344951 LAMA1P25391 3075 aa8.06□□□□□ -1.12
CUL3-202ENST00000344951 COL6A3P12111 3177 aa8.06□□□□□ -1.12
CUL3-202ENST00000344951 TEP1Q99973 2627 aaKnown RBP8.05□□□□□ -1.12
CUL3-202ENST00000344951 NBEAQ8NFP9 2946 aa8.03□□□□□ -1.12
CUL3-202ENST00000344951 LRBAP50851 2863 aa8.02□□□□□ -1.13
CUL3-202ENST00000344951 REV3LO60673 3130 aa8□□□□□ -1.13
CUL3-202ENST00000344951 COL6A5A8TX70 2615 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms