RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 C1orf195Q5TG92 126 aa10.97□□□□□ -0.65
CEACAM3-201ENST00000344550 SNCGO76070 127 aa10.94□□□□□ -0.66
CEACAM3-201ENST00000344550 OCIAD2Q56VL3 154 aa10.92□□□□□ -0.66
CEACAM3-201ENST00000344550 CLEC2BQ92478 149 aa10.92□□□□□ -0.66
CEACAM3-201ENST00000344550 KRTAP4-1Q9BYQ7 146 aa10.92□□□□□ -0.66
CEACAM3-201ENST00000344550 A0A0B4J2C4 111 aa10.91□□□□□ -0.66
CEACAM3-201ENST00000344550 C14orf144Q96I85 54 aa10.91□□□□□ -0.66
CEACAM3-201ENST00000344550 C12orf57Q99622 126 aa10.91□□□□□ -0.66
CEACAM3-201ENST00000344550 VAMP8Q9BV40 100 aa10.91□□□□□ -0.66
CEACAM3-201ENST00000344550 H0YGX0 51 aa10.9□□□□□ -0.66
CEACAM3-201ENST00000344550 CFC1BP0CG36 223 aa10.9□□□□□ -0.66
CEACAM3-201ENST00000344550 CFC1P0CG37 223 aa10.9□□□□□ -0.66
CEACAM3-201ENST00000344550 SPATA45Q537H7 98 aa10.9□□□□□ -0.66
CEACAM3-201ENST00000344550 RAB37Q96AX2 223 aa10.9□□□□□ -0.66
CEACAM3-201ENST00000344550 A0A0G2JQZ4 141 aa10.89□□□□□ -0.67
CEACAM3-201ENST00000344550 PAM16Q9Y3D7 125 aa10.89□□□□□ -0.67
CEACAM3-201ENST00000344550 C9orf92A6NGG3 77 aa10.88□□□□□ -0.67
CEACAM3-201ENST00000344550 SNHG12Q9BXW3 62 aa10.88□□□□□ -0.67
CEACAM3-201ENST00000344550 TRBV7-7A0A0K0K1E9 115 aa10.86□□□□□ -0.67
CEACAM3-201ENST00000344550 GHRHP01286 108 aa10.86□□□□□ -0.67
CEACAM3-201ENST00000344550 TMEM238LA0A1B0GVL6 79 aa10.85□□□□□ -0.67
CEACAM3-201ENST00000344550 A6NJY4 79 aa10.85□□□□□ -0.67
CEACAM3-201ENST00000344550 IGFL1Q6UW32 110 aa10.85□□□□□ -0.67
CEACAM3-201ENST00000344550 C2orf91Q6ZV80 131 aa10.84□□□□□ -0.67
CEACAM3-201ENST00000344550 A0A1B0GX51 115 aa10.83□□□□□ -0.68
CEACAM3-201ENST00000344550 PCOTHQ58A44 107 aa10.83□□□□□ -0.68
CEACAM3-201ENST00000344550 CEND1Q8N111 149 aa10.82□□□□□ -0.68
CEACAM3-201ENST00000344550 PRO1854Q9UHT4 67 aa10.81□□□□□ -0.68
CEACAM3-201ENST00000344550 RPL37P61927 97 aaKnown RBP10.78□□□□□ -0.68
CEACAM3-201ENST00000344550 Q6Q795 121 aa10.78□□□□□ -0.68
CEACAM3-201ENST00000344550 KRTAP9-2Q9BYQ4 174 aa10.77□□□□□ -0.69
CEACAM3-201ENST00000344550 SS18L2Q9UHA2 77 aa10.75□□□□□ -0.69
CEACAM3-201ENST00000344550 NDUFV3P56181 108 aaKnown RBP10.74□□□□□ -0.69
CEACAM3-201ENST00000344550 TEN1Q86WV5 123 aa10.73□□□□□ -0.69
CEACAM3-201ENST00000344550 FAM218AQ96MZ4 157 aa10.73□□□□□ -0.69
CEACAM3-201ENST00000344550 H3BQ85 93 aa10.72□□□□□ -0.69
CEACAM3-201ENST00000344550 H3BUT2 72 aa10.72□□□□□ -0.69
CEACAM3-201ENST00000344550 LST1O00453 97 aa10.72□□□□□ -0.69
CEACAM3-201ENST00000344550 FXYD2P54710 66 aa10.71□□□□□ -0.69
CEACAM3-201ENST00000344550 HSD52Q0P140 79 aa10.7□□□□□ -0.7
CEACAM3-201ENST00000344550 PYY3Q5JQD4 70 aa10.7□□□□□ -0.7
CEACAM3-201ENST00000344550 LCE2CQ5TA81 110 aa10.7□□□□□ -0.7
CEACAM3-201ENST00000344550 KRTAP19-2Q3LHN2 52 aa10.69□□□□□ -0.7
CEACAM3-201ENST00000344550 H3BMG7 143 aa10.67□□□□□ -0.7
CEACAM3-201ENST00000344550 TRIAP1O43715 76 aa10.66□□□□□ -0.7
CEACAM3-201ENST00000344550 Q75L30 129 aa10.65□□□□□ -0.7
CEACAM3-201ENST00000344550 COX6CP09669 75 aa10.64□□□□□ -0.71
CEACAM3-201ENST00000344550 FABP2P12104 132 aa10.64□□□□□ -0.71
CEACAM3-201ENST00000344550 DNAL4O96015 105 aa10.63□□□□□ -0.71
CEACAM3-201ENST00000344550 OBSCN-AS1Q96MR7 158 aa10.61□□□□□ -0.71
CEACAM3-201ENST00000344550 UQCR10Q9UDW1 63 aa10.61□□□□□ -0.71
CEACAM3-201ENST00000344550 ATP11AUNQ6ZP68 121 aa10.6□□□□□ -0.71
CEACAM3-201ENST00000344550 ORMDL1Q9P0S3 153 aa10.6□□□□□ -0.71
CEACAM3-201ENST00000344550 A0A087WSZ3 146 aa10.59□□□□□ -0.71
CEACAM3-201ENST00000344550 TMEM256-PLSCR3K7ERE1 68 aa10.59□□□□□ -0.71
CEACAM3-201ENST00000344550 PSMB2P49721 201 aa10.59□□□□□ -0.71
CEACAM3-201ENST00000344550 MT1HP80294 61 aa10.57□□□□□ -0.72
CEACAM3-201ENST00000344550 TRBV7-4A0A0J9YYF1 115 aa10.56□□□□□ -0.72
CEACAM3-201ENST00000344550 ANKRD29Q8N6D5 301 aa10.55□□□□□ -0.72
CEACAM3-201ENST00000344550 LCE2DQ5TA82 110 aaPredicted RBP10.54□□□□□ -0.72
CEACAM3-201ENST00000344550 A0A1W2PNM2 257 aa10.53□□□□□ -0.72
CEACAM3-201ENST00000344550 K7ERJ3 54 aa10.53□□□□□ -0.72
CEACAM3-201ENST00000344550 Q96NJ1 140 aa10.53□□□□□ -0.72
CEACAM3-201ENST00000344550 C20orf166-AS1Q96NR2 134 aa10.53□□□□□ -0.72
CEACAM3-201ENST00000344550 UBE2V1Q13404 147 aa10.52□□□□□ -0.73
CEACAM3-201ENST00000344550 TRACP01848 142 aa10.51□□□□□ -0.73
CEACAM3-201ENST00000344550 COX6B2Q6YFQ2 88 aa10.5□□□□□ -0.73
CEACAM3-201ENST00000344550 A8MUU9 505 aa10.49□□□□□ -0.73
CEACAM3-201ENST00000344550 TMA7Q9Y2S6 64 aaKnown RBP10.49□□□□□ -0.73
CEACAM3-201ENST00000344550 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
CEACAM3-201ENST00000344550 KRTAP9-6A0A140TA67 174 aa10.43□□□□□ -0.74
CEACAM3-201ENST00000344550 CCKP06307 115 aa10.43□□□□□ -0.74
CEACAM3-201ENST00000344550 C21orf62-AS1Q17RA5 79 aa10.43□□□□□ -0.74
CEACAM3-201ENST00000344550 SIGMAR1Q99720 223 aa10.43□□□□□ -0.74
CEACAM3-201ENST00000344550 IGKV4-1P06312 121 aa10.41□□□□□ -0.74
CEACAM3-201ENST00000344550 LINC00313P59037 77 aa10.41□□□□□ -0.74
CEACAM3-201ENST00000344550 RBM3P98179 157 aaKnown RBP10.4□□□□□ -0.74
CEACAM3-201ENST00000344550 LINC00472Q9H8W2 130 aa10.4□□□□□ -0.74
CEACAM3-201ENST00000344550 M0R2T5 61 aa10.39□□□□□ -0.75
CEACAM3-201ENST00000344550 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
CEACAM3-201ENST00000344550 KRTAP10-6P60371 365 aaPredicted RBP10.38□□□□□ -0.75
CEACAM3-201ENST00000344550 DSCR8Q96T75 97 aa10.38□□□□□ -0.75
CEACAM3-201ENST00000344550 M0R143 59 aa10.37□□□□□ -0.75
CEACAM3-201ENST00000344550 DSCR10P59022 87 aa10.37□□□□□ -0.75
CEACAM3-201ENST00000344550 A0A1B0GV72 72 aa10.35□□□□□ -0.75
CEACAM3-201ENST00000344550 TRBV20-1A0A075B6N2 111 aa10.33□□□□□ -0.76
CEACAM3-201ENST00000344550 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
CEACAM3-201ENST00000344550 FLGP20930 4061 aaPredicted RBP10.32□□□□□ -0.76
CEACAM3-201ENST00000344550 KRTAP16-1A8MUX0 517 aa10.31□□□□□ -0.76
CEACAM3-201ENST00000344550 C9JAW5 83 aa10.31□□□□□ -0.76
CEACAM3-201ENST00000344550 A0A1B0GW54 56 aa10.3□□□□□ -0.76
CEACAM3-201ENST00000344550 C8orf87E5RJ46 101 aa10.29□□□□□ -0.76
CEACAM3-201ENST00000344550 J3KT08 172 aa10.29□□□□□ -0.76
CEACAM3-201ENST00000344550 ATXN8Q156A1 80 aa10.29□□□□□ -0.76
CEACAM3-201ENST00000344550 JMJD7-PLA2G4BH0Y9G9 81 aa10.28□□□□□ -0.76
CEACAM3-201ENST00000344550 SMIM6P0DI80 62 aa10.28□□□□□ -0.76
CEACAM3-201ENST00000344550 VPS25Q9BRG1 176 aa10.27□□□□□ -0.77
CEACAM3-201ENST00000344550 DEFB116Q30KQ4 102 aa10.26□□□□□ -0.77
CEACAM3-201ENST00000344550 IGHV6-1A0A0B4J1U7 121 aa10.25□□□□□ -0.77
CEACAM3-201ENST00000344550 A0A1B0GVX0 72 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms