RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 MOBPQ13875 183 aa7.04□□□□□ -1.28
RPL28-201ENST00000344063 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
RPL28-201ENST00000344063 PRR15Q8IV56 129 aa7.02□□□□□ -1.29
RPL28-201ENST00000344063 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.29
RPL28-201ENST00000344063 TEX15Q9BXT5 2789 aa7.01□□□□□ -1.29
RPL28-201ENST00000344063 UQCR11O14957 56 aa7.01□□□□□ -1.29
RPL28-201ENST00000344063 IGSF10Q6WRI0 2623 aa7□□□□□ -1.29
RPL28-201ENST00000344063 DSCR10P59022 87 aa7□□□□□ -1.29
RPL28-201ENST00000344063 ASPMQ8IZT6 3477 aa7□□□□□ -1.29
RPL28-201ENST00000344063 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
RPL28-201ENST00000344063 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
RPL28-201ENST00000344063 H3BS24 57 aa6.99□□□□□ -1.29
RPL28-201ENST00000344063 TNRC18O15417 2968 aaPredicted RBP6.99□□□□□ -1.29
RPL28-201ENST00000344063 ZFHX4Q86UP3 3567 aa6.99□□□□□ -1.29
RPL28-201ENST00000344063 CASC10Q5T4H9 136 aa6.99□□□□□ -1.29
RPL28-201ENST00000344063 K7EIL1 84 aa6.99□□□□□ -1.29
RPL28-201ENST00000344063 Q1T7F1 81 aa6.99□□□□□ -1.29
RPL28-201ENST00000344063 UBR5O95071 2799 aaPredicted RBP6.96□□□□□ -1.29
RPL28-201ENST00000344063 C9orf163Q8N9P6 203 aa6.96□□□□□ -1.3
RPL28-201ENST00000344063 RTL8CO15255 209 aa6.96□□□□□ -1.3
RPL28-201ENST00000344063 CNBPP62633 177 aaKnown RBP6.95□□□□□ -1.3
RPL28-201ENST00000344063 MIR22HGQ0VDD5 57 aa6.95□□□□□ -1.3
RPL28-201ENST00000344063 SPRR4Q96PI1 79 aa6.95□□□□□ -1.3
RPL28-201ENST00000344063 COL6A5A8TX70 2615 aa6.95□□□□□ -1.3
RPL28-201ENST00000344063 FLNCQ14315 2725 aa6.95□□□□□ -1.3
RPL28-201ENST00000344063 RBM12B-AS1Q9P1G2 102 aa6.94□□□□□ -1.3
RPL28-201ENST00000344063 DMDP11532 3685 aa6.94□□□□□ -1.3
RPL28-201ENST00000344063 MRPL34Q9BQ48 92 aaKnown RBP6.93□□□□□ -1.3
RPL28-201ENST00000344063 BAHCC1Q9P281 2608 aa6.93□□□□□ -1.3
RPL28-201ENST00000344063 SETXQ7Z333 2677 aaKnown RBP6.92□□□□□ -1.3
RPL28-201ENST00000344063 C8orf17Q9NRJ1 99 aa6.91□□□□□ -1.3
RPL28-201ENST00000344063 ZANQ9Y493 2812 aa6.91□□□□□ -1.3
RPL28-201ENST00000344063 PRR26Q8N8Z3 221 aa6.91□□□□□ -1.3
RPL28-201ENST00000344063 ANAPC11Q9NYG5 84 aa6.9□□□□□ -1.31
RPL28-201ENST00000344063 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
RPL28-201ENST00000344063 SPRR1AP35321 89 aa6.89□□□□□ -1.31
RPL28-201ENST00000344063 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
RPL28-201ENST00000344063 Q8N9P0 234 aaPredicted RBP6.89□□□□□ -1.31
RPL28-201ENST00000344063 SPANXA2-OT1Q8N9U9 137 aa6.88□□□□□ -1.31
RPL28-201ENST00000344063 LINC00313P59037 77 aa6.88□□□□□ -1.31
RPL28-201ENST00000344063 A0A1B0GVX0 72 aa6.88□□□□□ -1.31
RPL28-201ENST00000344063 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
RPL28-201ENST00000344063 Q5VV11 94 aa6.88□□□□□ -1.31
RPL28-201ENST00000344063 TEP1Q99973 2627 aaKnown RBP6.88□□□□□ -1.31
RPL28-201ENST00000344063 NBEAL1Q6ZS30 2694 aa6.87□□□□□ -1.31
RPL28-201ENST00000344063 SPACA4Q8TDM5 124 aa6.87□□□□□ -1.31
RPL28-201ENST00000344063 ZNF861PO60384 105 aa6.86□□□□□ -1.31
RPL28-201ENST00000344063 KRTAP26-1Q6PEX3 210 aa6.86□□□□□ -1.31
RPL28-201ENST00000344063 APLNQ9ULZ1 77 aa6.86□□□□□ -1.31
RPL28-201ENST00000344063 CSMD1Q96PZ7 3565 aa6.86□□□□□ -1.31
RPL28-201ENST00000344063 UTP20O75691 2785 aaKnown RBP6.85□□□□□ -1.31
RPL28-201ENST00000344063 A0A087WTM6 91 aa6.84□□□□□ -1.31
RPL28-201ENST00000344063 PRAC1Q96KF2 57 aa6.84□□□□□ -1.31
RPL28-201ENST00000344063 FLG2Q5D862 2391 aaPredicted RBP6.83□□□□□ -1.32
RPL28-201ENST00000344063 CELSR2Q9HCU4 2923 aa6.83□□□□□ -1.32
RPL28-201ENST00000344063 STAB1Q9NY15 2570 aa6.83□□□□□ -1.32
RPL28-201ENST00000344063 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
RPL28-201ENST00000344063 RELNP78509 3460 aa6.82□□□□□ -1.32
RPL28-201ENST00000344063 FBN2P35556 2912 aa6.81□□□□□ -1.32
RPL28-201ENST00000344063 PSORS1C2Q9UIG4 136 aa6.8□□□□□ -1.32
RPL28-201ENST00000344063 Q75L30 129 aa6.8□□□□□ -1.32
RPL28-201ENST00000344063 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
RPL28-201ENST00000344063 HRNRQ86YZ3 2850 aaPredicted RBP6.79□□□□□ -1.32
RPL28-201ENST00000344063 IGLV7-46A0A075B6I9 117 aa6.78□□□□□ -1.32
RPL28-201ENST00000344063 LAMA5O15230 3695 aa6.78□□□□□ -1.32
RPL28-201ENST00000344063 SMG1Q96Q15 3661 aaKnown RBP6.77□□□□□ -1.33
RPL28-201ENST00000344063 NF1P21359 2839 aa6.77□□□□□ -1.33
RPL28-201ENST00000344063 A8MU10 97 aa6.77□□□□□ -1.33
RPL28-201ENST00000344063 SPINK7P58062 85 aa6.77□□□□□ -1.33
RPL28-201ENST00000344063 HIVEP1P15822 2718 aa6.77□□□□□ -1.33
RPL28-201ENST00000344063 APCP25054 2843 aa6.76□□□□□ -1.33
RPL28-201ENST00000344063 SPRR1BP22528 89 aa6.76□□□□□ -1.33
RPL28-201ENST00000344063 TNP2Q05952 138 aa6.76□□□□□ -1.33
RPL28-201ENST00000344063 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
RPL28-201ENST00000344063 MMP24-AS1A0A0U1RRL7 71 aa6.74□□□□□ -1.33
RPL28-201ENST00000344063 LUZP6Q538Z0 58 aa6.73□□□□□ -1.33
RPL28-201ENST00000344063 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
RPL28-201ENST00000344063 NSD1Q96L73 2696 aaPredicted RBP6.72□□□□□ -1.33
RPL28-201ENST00000344063 Q96NJ1 140 aa6.72□□□□□ -1.33
RPL28-201ENST00000344063 HRES1P13985 223 aa6.72□□□□□ -1.33
RPL28-201ENST00000344063 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
RPL28-201ENST00000344063 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
RPL28-201ENST00000344063 CUBNO60494 3623 aa6.7□□□□□ -1.34
RPL28-201ENST00000344063 ZCCHC13Q8WW36 166 aaKnown RBP6.69□□□□□ -1.34
RPL28-201ENST00000344063 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.69□□□□□ -1.34
RPL28-201ENST00000344063 CRYBG3Q68DQ2 2970 aa6.68□□□□□ -1.34
RPL28-201ENST00000344063 DCHS2Q6V1P9 2916 aa6.68□□□□□ -1.34
RPL28-201ENST00000344063 DMBT1Q9UGM3 2413 aaPredicted RBP6.68□□□□□ -1.34
RPL28-201ENST00000344063 Q8N1X5 172 aa6.68□□□□□ -1.34
RPL28-201ENST00000344063 J3QL48 77 aa6.67□□□□□ -1.34
RPL28-201ENST00000344063 SVEP1Q4LDE5 3571 aa6.67□□□□□ -1.34
RPL28-201ENST00000344063 KRTAP1-5Q9BYS1 174 aa6.67□□□□□ -1.34
RPL28-201ENST00000344063 A0A0D9SG42 100 aa6.66□□□□□ -1.34
RPL28-201ENST00000344063 STAB2Q8WWQ8 2551 aa6.65□□□□□ -1.34
RPL28-201ENST00000344063 ITPR2Q14571 2701 aa6.65□□□□□ -1.35
RPL28-201ENST00000344063 CELSR1Q9NYQ6 3014 aa6.63□□□□□ -1.35
RPL28-201ENST00000344063 SMR3BP02814 79 aaPredicted RBP6.62□□□□□ -1.35
RPL28-201ENST00000344063 CSAG1Q6PB30 78 aa6.62□□□□□ -1.35
RPL28-201ENST00000344063 LINC00304Q8N9R0 145 aa6.62□□□□□ -1.35
RPL28-201ENST00000344063 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms