RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SPRR1AP35321 89 aa9.4□□□□□ -0.9
CLCN1-201ENST00000343257 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.9
CLCN1-201ENST00000343257 A6NED7 52 aa9.4□□□□□ -0.9
CLCN1-201ENST00000343257 REG3GQ6UW15 175 aa9.4□□□□□ -0.9
CLCN1-201ENST00000343257 PCOTHQ58A44 107 aa9.4□□□□□ -0.91
CLCN1-201ENST00000343257 DEFB131BA0A096LNP1 70 aa9.39□□□□□ -0.91
CLCN1-201ENST00000343257 UBE2AP49459 152 aa9.39□□□□□ -0.91
CLCN1-201ENST00000343257 OXLD1Q5BKU9 147 aa9.39□□□□□ -0.91
CLCN1-201ENST00000343257 LINC01556Q5JQF7 62 aa9.38□□□□□ -0.91
CLCN1-201ENST00000343257 FBN1P35555 2871 aaKnown RBP9.37□□□□□ -0.91
CLCN1-201ENST00000343257 CSMD3Q7Z407 3707 aa9.36□□□□□ -0.91
CLCN1-201ENST00000343257 LCA10Q71F78 164 aa9.36□□□□□ -0.91
CLCN1-201ENST00000343257 H0Y9J4 135 aa9.36□□□□□ -0.91
CLCN1-201ENST00000343257 HECTD1Q9ULT8 2610 aa9.35□□□□□ -0.91
CLCN1-201ENST00000343257 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
CLCN1-201ENST00000343257 MAST4O15021 2626 aa9.34□□□□□ -0.91
CLCN1-201ENST00000343257 LINC00588Q9Y4M8 146 aa9.34□□□□□ -0.91
CLCN1-201ENST00000343257 KRTAP29-1A8MX34 341 aaPredicted RBP9.33□□□□□ -0.92
CLCN1-201ENST00000343257 CD164Q04900 197 aa9.33□□□□□ -0.92
CLCN1-201ENST00000343257 COA5Q86WW8 74 aa9.33□□□□□ -0.92
CLCN1-201ENST00000343257 LIMD2Q9BT23 127 aa9.33□□□□□ -0.92
CLCN1-201ENST00000343257 INAFM1C9JVW0 142 aa9.33□□□□□ -0.92
CLCN1-201ENST00000343257 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
CLCN1-201ENST00000343257 PLA2G2DQ9UNK4 145 aa9.32□□□□□ -0.92
CLCN1-201ENST00000343257 SPAG11AQ6PDA7 123 aa9.32□□□□□ -0.92
CLCN1-201ENST00000343257 RBM12B-AS1Q9P1G2 102 aa9.3□□□□□ -0.92
CLCN1-201ENST00000343257 C11orf45Q8TAV5 145 aa9.3□□□□□ -0.92
CLCN1-201ENST00000343257 NOTCH1P46531 2555 aa9.3□□□□□ -0.92
CLCN1-201ENST00000343257 IGLV5-37A0A075B6J1 123 aa9.29□□□□□ -0.92
CLCN1-201ENST00000343257 H3BNG1 76 aa9.29□□□□□ -0.92
CLCN1-201ENST00000343257 KTN1-AS1Q86SY8 53 aa9.29□□□□□ -0.92
CLCN1-201ENST00000343257 SPANXA2-OT1Q8N9U9 137 aa9.27□□□□□ -0.93
CLCN1-201ENST00000343257 COL6A5A8TX70 2615 aa9.26□□□□□ -0.93
CLCN1-201ENST00000343257 KRTAP10-11P60412 298 aa9.26□□□□□ -0.93
CLCN1-201ENST00000343257 DNAH10OSP0CZ25 163 aa9.25□□□□□ -0.93
CLCN1-201ENST00000343257 C9orf163Q8N9P6 203 aa9.25□□□□□ -0.93
CLCN1-201ENST00000343257 ANK2Q01484 3957 aa9.25□□□□□ -0.93
CLCN1-201ENST00000343257 COL7A1Q02388 2944 aa9.25□□□□□ -0.93
CLCN1-201ENST00000343257 NSD1Q96L73 2696 aaPredicted RBP9.25□□□□□ -0.93
CLCN1-201ENST00000343257 A8MWP4 228 aa9.24□□□□□ -0.93
CLCN1-201ENST00000343257 CHTF8P0CG12 524 aa9.24□□□□□ -0.93
CLCN1-201ENST00000343257 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
CLCN1-201ENST00000343257 NDUFS5O43920 106 aa9.23□□□□□ -0.93
CLCN1-201ENST00000343257 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
CLCN1-201ENST00000343257 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
CLCN1-201ENST00000343257 Q75L30 129 aa9.22□□□□□ -0.93
CLCN1-201ENST00000343257 LINC00472Q9H8W2 130 aa9.2□□□□□ -0.94
CLCN1-201ENST00000343257 DNAH10Q8IVF4 4471 aa9.2□□□□□ -0.94
CLCN1-201ENST00000343257 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
CLCN1-201ENST00000343257 H3BPC8 53 aa9.19□□□□□ -0.94
CLCN1-201ENST00000343257 SPINK7P58062 85 aa9.19□□□□□ -0.94
CLCN1-201ENST00000343257 MMP24-AS1A0A0U1RRL7 71 aa9.18□□□□□ -0.94
CLCN1-201ENST00000343257 STAB1Q9NY15 2570 aa9.18□□□□□ -0.94
CLCN1-201ENST00000343257 IGLV7-46A0A075B6I9 117 aa9.18□□□□□ -0.94
CLCN1-201ENST00000343257 A6NN06 94 aa9.18□□□□□ -0.94
CLCN1-201ENST00000343257 IGLV8-61A0A075B6I0 122 aa9.16□□□□□ -0.94
CLCN1-201ENST00000343257 MOBPQ13875 183 aa9.16□□□□□ -0.94
CLCN1-201ENST00000343257 IGLV9-49A0A0B4J1Y8 123 aa9.16□□□□□ -0.94
CLCN1-201ENST00000343257 CDC42SE1Q9NRR8 79 aa9.15□□□□□ -0.94
CLCN1-201ENST00000343257 NBEAL1Q6ZS30 2694 aa9.15□□□□□ -0.95
CLCN1-201ENST00000343257 TENM2Q9NT68 2774 aa9.13□□□□□ -0.95
CLCN1-201ENST00000343257 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
CLCN1-201ENST00000343257 HRES1P13985 223 aa9.1□□□□□ -0.95
CLCN1-201ENST00000343257 PRR26Q8N8Z3 221 aa9.1□□□□□ -0.95
CLCN1-201ENST00000343257 K7EIL1 84 aa9.08□□□□□ -0.96
CLCN1-201ENST00000343257 LYSTQ99698 3801 aa9.08□□□□□ -0.96
CLCN1-201ENST00000343257 LINC01558Q9Y6Z2 57 aa9.08□□□□□ -0.96
CLCN1-201ENST00000343257 PRAC1Q96KF2 57 aa9.08□□□□□ -0.96
CLCN1-201ENST00000343257 KRTAP1-5Q9BYS1 174 aa9.08□□□□□ -0.96
CLCN1-201ENST00000343257 C7orf65Q6ZTY9 151 aa9.07□□□□□ -0.96
CLCN1-201ENST00000343257 KMT2BQ9UMN6 2715 aaPredicted RBP9.06□□□□□ -0.96
CLCN1-201ENST00000343257 DNAH1Q9P2D7 4330 aa9.05□□□□□ -0.96
CLCN1-201ENST00000343257 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
CLCN1-201ENST00000343257 A0A087X002 238 aa9.04□□□□□ -0.96
CLCN1-201ENST00000343257 NOTCH2NLQ7Z3S9 236 aa9.04□□□□□ -0.96
CLCN1-201ENST00000343257 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
CLCN1-201ENST00000343257 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
CLCN1-201ENST00000343257 Q96NJ1 140 aa9.01□□□□□ -0.97
CLCN1-201ENST00000343257 PANO1I0J062 215 aa9□□□□□ -0.97
CLCN1-201ENST00000343257 SPINK6Q6UWN8 80 aa9□□□□□ -0.97
CLCN1-201ENST00000343257 CDK2AP2O75956 126 aa9□□□□□ -0.97
CLCN1-201ENST00000343257 SPRR1BP22528 89 aa9□□□□□ -0.97
CLCN1-201ENST00000343257 TP53AIP1Q9HCN2 124 aa8.99□□□□□ -0.97
CLCN1-201ENST00000343257 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
CLCN1-201ENST00000343257 LINC00313P59037 77 aa8.97□□□□□ -0.97
CLCN1-201ENST00000343257 RETNLBQ9BQ08 111 aa8.96□□□□□ -0.98
CLCN1-201ENST00000343257 Q6ZR54 194 aa8.95□□□□□ -0.98
CLCN1-201ENST00000343257 UBE2DNLQ8IWF7 75 aa8.95□□□□□ -0.98
CLCN1-201ENST00000343257 DNAH9Q9NYC9 4486 aa8.95□□□□□ -0.98
CLCN1-201ENST00000343257 A0A1B0GVX0 72 aa8.95□□□□□ -0.98
CLCN1-201ENST00000343257 J3QKU1 62 aa8.95□□□□□ -0.98
CLCN1-201ENST00000343257 STAB2Q8WWQ8 2551 aa8.95□□□□□ -0.98
CLCN1-201ENST00000343257 MRPL34Q9BQ48 92 aaKnown RBP8.94□□□□□ -0.98
CLCN1-201ENST00000343257 Q5W150 140 aa8.93□□□□□ -0.98
CLCN1-201ENST00000343257 ASB16-AS1Q495Z4 193 aa8.9□□□□□ -0.98
CLCN1-201ENST00000343257 MDFIQ99750 246 aa8.89□□□□□ -0.99
CLCN1-201ENST00000343257 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
CLCN1-201ENST00000343257 CMYA5Q8N3K9 4069 aa8.86□□□□□ -0.99
CLCN1-201ENST00000343257 MGAM2Q2M2H8 2515 aa8.86□□□□□ -0.99
CLCN1-201ENST00000343257 HUWE1Q7Z6Z7 4374 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms